Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq36 152 1e-31 seq293 141 2e-28 seq86338 98.7 2e-15 seq54066 98.7 2e-15 seq486 89.7 1e-12 seq101 89.7 1e-12 >seq36 Length=6822877 Score = 152 bits (168), Expect = 1e-31 Identities = 300/440 (68%), Gaps = 13/440 (3%) Strand=Plus/Minus Query 230200 TGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAA 230259 || ||||| || || | || || || ||||||||||||||||| |||||| ||| | | Sbjct 1783736 TGCGTTGAGGGCATCTTCTTCTCTGGTAGTTTCTGCGCCATCTTCTGGCTGAAGAAGAGA 1783677 Query 230260 GGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCAT 230319 || | |||||||| ||| | | || |||||| | || ||| || ||||| || || Sbjct 1783676 GGGCTAATGCCTGGTCTCACTTTTTCCAACGAGCTTATTTCTCGTGATGAGGGCCTGCAC 1783617 Query 230320 CAACAGTTCGGCGAG-CTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGGT 230378 | || | || | || |||| |||| | || ||||| | || | ||| Sbjct 1783616 TGTGACTTTG-CGTGTCTGCTGTACAGTCTGCTCAATAATAAGCTCTCTGAGGATAGGGT 1783558 Query 230379 CAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCC 230438 | | | || || | || || || || | || | |||||| ||||||||||| || Sbjct 1783557 TAGAGAGATTGTTGCTGATGCTGTAGATATAGAGAGGGAGTTTGTTTGTGACGCTCCTC- 1783499 Query 230439 ATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGA 230498 || | || ||||||||||| || ||| | |||||||| || || || ||||| Sbjct 1783498 --------TTGTGGGGATGAACGCTGATCTAATGAGTCAGTACATAGAGTTTGTTGCCGA 1783447 Query 230499 CCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATT 230558 || || ||| ||| | ||||||| || ||||| | ||| || |||| | Sbjct 1783446 TCGTCTTCTTGGTGCTTTAGGTTACGGTAAGATGTACGAGGTATCGAATCCATTTGACTG 1783387 Query 230559 TATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTA 230618 |||||||| ||||| |||||||||||||| ||||||||||| || | ||| |||| || Sbjct 1783386 GATGGAGCTTATTTCTCTTCAAGGGAAGACAAACTTCTTCGAGAAAAGGGTCGGTGAATA 1783327 Query 230619 TCAG-AGGCCTGGTGTGATG 230637 ||| |||| | | |||||| Sbjct 1783326 CCAGAAGGCGTCG-GTGATG 1783308 >seq293 Length=413263 Score = 141 bits (156), Expect = 2e-28 Identities = 312/461 (68%), Gaps = 10/461 (2%) Strand=Plus/Plus Query 230168 AATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGA 230227 |||| ||||| ||||| | |||| | | ||| || ||||||||| | || ||||| | Sbjct 226932 AATCATTTGCTGAGCGGATTCTCGCTTTTGCGTGCGTCGAAGGTATTTTCTTCTCCGGCA 226991 Query 230228 GTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287 | |||||||||||||| ||||| ||| ||| ||||||| || ||| | | |||| Sbjct 226992 GCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCTCACTTTTTCTA 227051 Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA 230347 ||||| ||||| ||| |||||||| ||||| | || | ||| ||||| | Sbjct 227052 ACGAGCTCATCTCTCGTGACGAGGGACTCCACTGCGACTTTGCTTGCCTTCTGTAT---A 227108 Query 230348 AGCTCCAG---AACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTG 230404 || | | |||||| | | |||| ||| | || || | || || || | Sbjct 227109 GCCTTCTGATCAACAAGATTTCGGAGGAGAGGGTTCGGGAGATTGTTGCCGATGCTGTAG 227168 Query 230405 AAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCT 230463 | | |||||||| || ||||||| || | || || ||| ||| | || |||||||| Sbjct 227169 ATATTGAAAAGGAATTTGTTTGTGATGCACTCCCCTG-CGCTCTTGTGGGGATGAACGCA 227227 Query 230464 GAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTAC 230523 || || ||| | | || || |||||||| || || || || ||| || || || || Sbjct 227228 GATCTAATGAGCCGCTATATTGAATTCGTGGCAGATCGGCTTGTTGGAGCTCTGGGCTAT 227287 Query 230524 GAGAAAGTGTACAACTCTA-AGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGG 230582 || || |||| | || ||| || |||| | ||||| ||||| ||||| || || Sbjct 227288 GACAAGATGTA-TGGTGTATCGAATCCATTTGATTGGATGGAACTCATCTCGCTGCAGGG 227346 Query 230583 GAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 ||||| || ||||| || ||| | || | || ||||||| Sbjct 227347 TAAGACTAATTTCTTTGAGAAGAGGGTTGGGGAGTATCAGA 227387 >seq86338 Length=33283 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 29011 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 29070 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 29071 CCCACGGTGGGC 29082 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || ||||||| |||||||||| Sbjct 28459 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGGGGGTTCGAGC 28518 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 28519 CCCCCGGTGGGC 28530 >seq54066 Length=62098 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 55262 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 55203 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 55202 CCCACGGTGGGC 55191 >seq486 Length=1040876 Score = 89.7 bits (98), Expect = 1e-12 Identities = 65/75 (87%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGG---GTTCG 165766 |||||||||||||||| |||||||||| || || |||| || |||||||||| ||||| Sbjct 278410 GCCCGTCTAGCTCAGTAGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTGTTCG 278351 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| ||||| Sbjct 278350 AGCCCCACGGTGGGC 278336 >seq101 Length=418085 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || ||||||| |||||||||| Sbjct 141603 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGGGGGTTCGAGC 141544 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 141543 CCCCCGGTGGGC 141532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1056609834901920