Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq36 87.8 2e-12 >seq36 Length=6822877 Score = 87.8 bits (96), Expect = 2e-12 Identities = 195/288 (68%), Gaps = 5/288 (2%) Strand=Plus/Plus Query 16493 CTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCC 16552 |||||||| || ||||| ||||| || ||||| ||||||||||||||||| || ||| Sbjct 1783891 CTGTACATCTCGGAGTGGATGTTTTCGATGGCGATCTGAAATCCATAGAAAGCGCGCGCC 1783950 Query 16553 TCCGCTATTTGTACTTCCACGTA-AAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611 |||| | ||||| ||| || | || || | || |||||||| ||||| ||||| Sbjct 1783951 TCCGGGAGCTGTACCTCC-CGCATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCCGTC 1784009 Query 16612 ACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGT-AAGAA 16670 || || || || || | | ||| | | ||||| |||||| || || | | | Sbjct 1784010 GGAAGCGGCGAAGAAAGCGAGAACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAGGGA 1784069 Query 16671 T--ATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGC 16728 | || ||| | | ||||| ||| | ||| |||||||||| ||||| || || Sbjct 1784070 TTCATTCCAGTGGCGGAGATCTTGGGACAGATCAACTTCTTCTGCTGTCCAGAAAGAGGC 1784129 Query 16729 CACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776 | || || || ||||| | ||| || | | ||| | || ||||| Sbjct 1784130 TTCGGCTTTCTTGTACATCTCCCAGATCTGAGGGTAGCGGATCGGAAA 1784177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510841718154880