Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq36 131 2e-25
seq468 91.5 2e-13
seq403 86.0 7e-12
>seq36
Length=6822877
Score = 131 bits (144), Expect = 2e-25
Identities = 383/587 (65%), Gaps = 5/587 (1%)
Strand=Plus/Plus
Query 24127 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 24186
||| || ||| || || || ||||| || ||||| || | | ||| | ||||||||||
Sbjct 1783595 ACAGCAGACACGCAAAGTCACAGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTGGAAA 1783654
Query 24187 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 24245
| ||||| || |||||||| || | ||| || ||||| || |||| |||| || |||
Sbjct 1783655 AAGTGAGACCAGGCATTAGCCCTCTCTTCTTCAGCCAGAAGATGG-CGCAGAAACTACCA 1783713
Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTG 24305
|| ||||| || || || || ||||| |||| || || ||| || || || |
Sbjct 1783714 GAGAAGAAGATGCCCTCAACGCAAGCAAATGCAAGAATTCGCTCTGCAAAAGAATCGGAG 1783773
Query 24306 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 24365
| | ||||| ||||||| | ||||| || || || | ||||| |||
Sbjct 1783774 GCGTCGATCCAGCGGAGAGCCCACTGTGCCTTGCGGGCGACGCAGGGAACGGTCTCGATA 1783833
Query 24366 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 24425
|||| ||||| | ||| || ||||| | || || || | | || ||
Sbjct 1783834 GCATGGAAGAGGTGCGATTTCTCTGCGGAGTCTTTGATGTAGGTTTCGAGAAGCAGGCTG 1783893
Query 24426 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 24485
||||| || || || |||||||| ||||| || |||||||| |||||| | |||||
Sbjct 1783894 TACATCTCGGAGTGGATGTTTTCGATGGCGATCTGAAATCCATAGAAAGCGCGCGCCTCC 1783953
Query 24486 GTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 24545
| | |||||| || || || | || | || || || ||||||||
Sbjct 1783954 GGGAGCTGTACCTCCCGCATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCCGTCGGAA 1784013
Query 24546 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAG---TTTA 24602
|| || || || || | || || ||| |||| |||||| | || || || |
Sbjct 1784014 GCGGCGAAGAAAGCGAGAACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAGGGATTCA 1784073
Query 24603 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 24662
||||| | || ||||| || | ||| |||||||| ||||||| || || || ||
Sbjct 1784074 TTCCAGTGGCGGAGATCTTGGGACAGATCAACTTCTTCTGCTGTCCAGAAAGAGGCTTCG 1784133
Query 24663 GCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAAT 24709
|| || || ||||| | |||||| | | | || | || ||||| ||
Sbjct 1784134 GCTTTCTTGTACATCTCCCAGATCTGAGGGTAGCGGATCGGAAACAT 1784180
>seq468
Length=902046
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483
||| || ||||| || | |||||||||||||| ||||||||| | ||| | | ||
Sbjct 789176 AGTGCCTGCATTGAACAGTGTAGGAGAAGCGTGAGTAAACCATCGCTGAGACATCAAATG 789117
Query 54484 GTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 54543
||| || ||| || || | ||||| || ||||| || || || || | ||| ||
Sbjct 789116 GTATGTTCTGATTGCAGACACAATATCATCTTTGTGAATCCCAACAGCAACTCTCATCAA 789057
Query 54544 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAA 54603
|||||| ||||| ||||| | || ||| | ||||| | ||||||| || |
Sbjct 789056 CATGTGTTGAGGCCTTTCGATGACCTTCCCAGAAACTTTCAAGAGGTAGGATCGCTCGAG 788997
Query 54604 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 54651
||||| ||||||||||| | ||| ||| || | || || |||||
Sbjct 788996 GGTTTTGAAACCAAAATAATCGTAGTCAAAATCCCTGTCATATATAAT 788949
>seq403
Length=1478721
Score = 86.0 bits (94), Expect = 7e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483
||| || ||||| ||||||||||||||||| || || ||||| || | ||||
Sbjct 384297 AGTGCCTGCATTGAATAAGGTAGGAGAAGCATGAGTGAACCACCGCAGTGACATCAGATG 384238
Query 54484 GTACGTCTCGATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTA 54542
||| || | || || || || ||||| |||| |||||| |||| || || | ||| |
Sbjct 384237 GTAGGTTTTAATGGCAGAATCAATATCTTCATT-ATGAATCCCTATAGCAACTCTCATCA 384179
Query 54543 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCA 54602
|||| ||||| || ||||| || | || || ||| | | || || | || |
Sbjct 384178 ACATATGCTGCGGCCTTTCCACCACTTTCCCAGATACTTTTAAAAGATAAGACCTCTCGA 384119
Query 54603 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 54651
||||||||||||||| || | || |||||||| || ||||| ||
Sbjct 384118 GAGTTTTAAAACCAAAGTAATCATAATCAAAGTCTCTATCATAAATGAT 384070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593056750552320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |