Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq258 111 2e-19 seq876 84.2 3e-11 >seq258 Length=1945713 Score = 111 bits (122), Expect = 2e-19 Identities = 109/138 (79%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688 || || || ||||| || ||||||||||||||| | | |||||||| || ||||| ||| Sbjct 1660422 CAGGACAAGGAAGGCATTCCACCTGATCAACAACGTTTGATTTTTGCTGGGAAACAGTTA 1660481 Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 || ||| |||| || |||| |||||| || ||||| || || |||||| | ||||| ||| Sbjct 1660482 GAAGATGGTCGGACCTTAGCAGATTACAACATTCAGAAGGAGTCAACTCTCCATTTAGTT 1660541 Query 124749 TT-ACGTTTACGAGGTGG 124765 || | | ||| ||||||| Sbjct 1660542 TTGAGGCTTA-GAGGTGG 1660558 >seq876 Length=1913211 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || || | ||||| || || ||||| || || || | ||| | || ||| Sbjct 666392 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGAGCTC- 666334 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || || || |||| || || |||||||| || || || || || ||||| Sbjct 666333 TGACACCATCGACAACGTAAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCGGATCA 666274 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || ||||| || || ||| | |||||| | ||||| | | |||||||| Sbjct 666273 GCAGAGGCTGATCTTTGCCGGCAAGCAACTCGAGGATGGCCGAACCCTTGCTGATTATAA 666214 Query 124718 TATTCAAAAAGAATCAAC 124735 ||||||||| || || || Sbjct 666213 TATTCAAAAGGAGTCCAC 666196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754610040371200