Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq258 111 2e-19
seq876 84.2 3e-11
>seq258
Length=1945713
Score = 111 bits (122), Expect = 2e-19
Identities = 109/138 (79%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688
|| || || ||||| || ||||||||||||||| | | |||||||| || ||||| |||
Sbjct 1660422 CAGGACAAGGAAGGCATTCCACCTGATCAACAACGTTTGATTTTTGCTGGGAAACAGTTA 1660481
Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748
|| ||| |||| || |||| |||||| || ||||| || || |||||| | ||||| |||
Sbjct 1660482 GAAGATGGTCGGACCTTAGCAGATTACAACATTCAGAAGGAGTCAACTCTCCATTTAGTT 1660541
Query 124749 TT-ACGTTTACGAGGTGG 124765
|| | | ||| |||||||
Sbjct 1660542 TTGAGGCTTA-GAGGTGG 1660558
>seq876
Length=1913211
Score = 84.2 bits (92), Expect = 3e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || || | ||||| || || ||||| || || || | ||| | || |||
Sbjct 666392 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGAGCTC- 666334
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||| || || || |||| || || |||||||| || || || || || |||||
Sbjct 666333 TGACACCATCGACAACGTAAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCGGATCA 666274
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| ||||| || ||||| || || ||| | |||||| | ||||| | | ||||||||
Sbjct 666273 GCAGAGGCTGATCTTTGCCGGCAAGCAACTCGAGGATGGCCGAACCCTTGCTGATTATAA 666214
Query 124718 TATTCAAAAAGAATCAAC 124735
||||||||| || || ||
Sbjct 666213 TATTCAAAAGGAGTCCAC 666196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 754610040371200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |