Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq258 95.1 2e-14
seq876 86.0 9e-12
seq202 86.0 9e-12
>seq258
Length=1945713
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107
|||||||||||||| || || || ||||| | ||| || || || || || ||||||
Sbjct 1660561 GTTCCACCTCTAAGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCT 1660502
Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167
| | || | | ||| ||||| ||||| |||||||||||||| | ||| ||||| ||
Sbjct 1660501 GCTAAGGTCCGACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGTTGTTGATCAGGT 1660442
Query 146168 GGAATTCCTTCTTTATCTTG 146187
||||| ||||| || || ||
Sbjct 1660441 GGAATGCCTTCCTTGTCCTG 1660422
>seq876
Length=1913211
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| ||||| | | || | ||||| |||||||| || || |||||||| | |
Sbjct 665938 CCACCCCTAAGACGAAGCACGAGATGTAGGGTAGATTCCTTCTGGATGTTATAATCAGCA 665997
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | || ||| || | |||||||||||||| |||| |||||||| ||||| |||
Sbjct 665998 AGGGTACGGCCATCCTCAAGCTGTTTTCCAGCAAATATCAGCCTTTGCTGGTCCGGGGGA 666057
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || || ||
Sbjct 666058 ATGCCCTCCTTGTCCTG 666074
>seq202
Length=4793652
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| || || |||| || || | ||| | ||||| || || || |||||||||| |
Sbjct 4328796 CCTCCCCTGAGTCGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCTGCA 4328737
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | || ||| || | || || ||||||||||| || || ||||| |||||||||
Sbjct 4328736 AGTGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGAGGA 4328677
Query 146171 ATTCCTTCTTTATCTTG 146187
|| |||||||| || ||
Sbjct 4328676 ATGCCTTCTTTGTCCTG 4328660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 742693799137280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |