Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq258 95.1 2e-14 seq876 86.0 9e-12 seq202 86.0 9e-12 >seq258 Length=1945713 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 |||||||||||||| || || || ||||| | ||| || || || || || |||||| Sbjct 1660561 GTTCCACCTCTAAGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCT 1660502 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | | || | | ||| ||||| ||||| |||||||||||||| | ||| ||||| || Sbjct 1660501 GCTAAGGTCCGACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGTTGTTGATCAGGT 1660442 Query 146168 GGAATTCCTTCTTTATCTTG 146187 ||||| ||||| || || || Sbjct 1660441 GGAATGCCTTCCTTGTCCTG 1660422 >seq876 Length=1913211 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| ||||| | | || | ||||| |||||||| || || |||||||| | | Sbjct 665938 CCACCCCTAAGACGAAGCACGAGATGTAGGGTAGATTCCTTCTGGATGTTATAATCAGCA 665997 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | || ||| || | |||||||||||||| |||| |||||||| ||||| ||| Sbjct 665998 AGGGTACGGCCATCCTCAAGCTGTTTTCCAGCAAATATCAGCCTTTGCTGGTCCGGGGGA 666057 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || || || || Sbjct 666058 ATGCCCTCCTTGTCCTG 666074 >seq202 Length=4793652 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || || || |||| || || | ||| | ||||| || || || |||||||||| | Sbjct 4328796 CCTCCCCTGAGTCGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCTGCA 4328737 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | || ||| || | || || ||||||||||| || || ||||| ||||||||| Sbjct 4328736 AGTGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGAGGA 4328677 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| || || Sbjct 4328676 ATGCCTTCTTTGTCCTG 4328660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742693799137280