Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq876 96.9 2e-15
seq2 84.2 1e-11
>seq876
Length=1913211
Score = 96.9 bits (106), Expect = 2e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|||||||| |||||||||||||| || ||| |||| || | ||| || || ||||||
Sbjct 530597 TCTTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAAA 530538
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTA-GATC 34317
|| | || ||||||||| || | || ||| ||||| || ||| ||| | |||
Sbjct 530537 ATCAACCTCTGCTGGTCCGGTGGGATGCCCTCTTTGTCCTGGATTTTTGACTTAACGAT- 530479
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | |||| || ||||| | || ||||| ||||| ||||| ||||| ||
Sbjct 530478 TTCGATGGTGTCGGAACTCTCCACGTCGAGAGTAATGGTCTTGCCAGTGAGGGTTTTGAC 530419
Query 34378 AAAGATCTGCAT 34389
||||||||||||
Sbjct 530418 AAAGATCTGCAT 530407
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| || || ||||||||||| || || || | || || | |||||| || |||||
Sbjct 530826 TTCCTTTTGGATGTTGTAGTCAGAGAGGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAA 530767
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316
|| | || ||||||||| ||| | || ||||||||| || ||| | ||| | ||
Sbjct 530766 GATCAACCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGAAT-TTTGGATTTGACAT 530708
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| |||| || | || || || | ||||||||| ||||||||||| || ||||
Sbjct 530707 TTTCGATCGTGTCAGAGCTCTCCACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTCA 530648
Query 34377 CAAAGATCTGCATCGCTC 34394
|||| ||||||||| |||
Sbjct 530647 CAAATATCTGCATCCCTC 530630
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | |||| ||| ||||| || |||||||| | ||| ||| | ||
Sbjct 665725 AGCACCAGGTGAAGAGTAGATTCCTTCTGAATATTGTAGTCTGCCAGGGTGCGGCCATCC 665784
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| |||||||| || || || ||||| |||||||| || | || |||||||||
Sbjct 665785 TCCAGTTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCC 665844
Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
|| ||| ||||| | | | || | ||| | || || || | ||||| ||
Sbjct 665845 TGGAT-TTTGGCTTTCACGTTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGATAGT 665903
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||| || || || || |||||||| ||||||||
Sbjct 665904 TTTCCCCGTAAGTGTCTTCACAAATATCTGCAT 665936
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || ||||| | ||| |||||||| |||||||||||||| ||| ||| ||||
Sbjct 530162 AGAACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCGGAGAGCGTTCGGCCGTCC 530103
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||| ||||| ||||| || |||| |||||| || || | | ||||| ||
Sbjct 530102 TCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGATCCGGTGGGATTCCTTCCTTATCC 530043
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|| || ||| | | | |||| ||||| || ||||| | || || ||
Sbjct 530042 TGGATTTTAGACTTAACGTTTTCAATCGTATCGGAGCTCTCCACGTCAAGGGTTATTGTC 529983
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||||||||| || || ||||| |||||||||
Sbjct 529982 TTGCCGGTGAGGGTCTTGACAAATATCTGCATC 529950
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||| ||||||| ||| ||| ||||| || ||||| || | || ||| | ||
Sbjct 666409 AGCACAAGGTGTAGGGTAGATTCCTTCTGGATATTGTAATCAGCAAGGGTTCGGCCATCC 666468
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296
|| | |||||| || || || || |||| ||| || || | |||| | || |||||||||
Sbjct 666469 TCTAGCTGCTTTCCGGCAAAGATCAGCCTCTGTTGATCCGGCGGG-ATGCCCTCCTTGTC 666527
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
|||||| ||| | | | | || | ||| | || || || | ||||||||
Sbjct 666528 CTGTATCTTAGCCTTCACGTTGTCGATGGTATCAGAACTCTCCACCTCAAGGGTGATGGT 666587
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||| ||||| ||||| || ||||||||||||
Sbjct 666588 CTTGCCTGTGAGGGTTTTGACGAAGATCTGCATC 666621
>seq2
Length=81761211
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/194 (70%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| | || ||| | || |||| ||||||||| |||||
Sbjct 19640948 TCCTTCTGGATGTTGTAGTCTGCAAGGGTACGACCATCCTCCAGCTGCTTGCCGGCGAAG 19641007
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316
|| | || ||||| ||| || | || ||| || || || ||||| ||| | |
Sbjct 19641008 ATCAACCTTTGCTGATCGGGAGGGATGCCCTCTTTATC--CTGAATTTTGGCCTTCACGT 19641065
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
|| | || | || | ||| || || | ||||| || || ||||||||||| ||||
Sbjct 19641066 CGTCGATGGTGTCTGAGCTTTCAACCTCTAGGGTGATAGTCTTACCGGTGAGAGTCTTCA 19641125
Query 34377 CAAAGATCTGCATC 34390
| ||||||||||||
Sbjct 19641126 CGAAGATCTGCATC 19641139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322719268375040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |