Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq876 96.9 2e-15 seq2 84.2 1e-11 >seq876 Length=1913211 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| |||||||||||||| || ||| |||| || | ||| || || |||||| Sbjct 530597 TCTTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAAA 530538 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTA-GATC 34317 || | || ||||||||| || | || ||| ||||| || ||| ||| | ||| Sbjct 530537 ATCAACCTCTGCTGGTCCGGTGGGATGCCCTCTTTGTCCTGGATTTTTGACTTAACGAT- 530479 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | |||| || ||||| | || ||||| ||||| ||||| ||||| || Sbjct 530478 TTCGATGGTGTCGGAACTCTCCACGTCGAGAGTAATGGTCTTGCCAGTGAGGGTTTTGAC 530419 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 530418 AAAGATCTGCAT 530407 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| || || ||||||||||| || || || | || || | |||||| || ||||| Sbjct 530826 TTCCTTTTGGATGTTGTAGTCAGAGAGGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAA 530767 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316 || | || ||||||||| ||| | || ||||||||| || ||| | ||| | || Sbjct 530766 GATCAACCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGAAT-TTTGGATTTGACAT 530708 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | |||| || | || || || | ||||||||| ||||||||||| || |||| Sbjct 530707 TTTCGATCGTGTCAGAGCTCTCCACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTCA 530648 Query 34377 CAAAGATCTGCATCGCTC 34394 |||| ||||||||| ||| Sbjct 530647 CAAATATCTGCATCCCTC 530630 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | |||| ||| ||||| || |||||||| | ||| ||| | || Sbjct 665725 AGCACCAGGTGAAGAGTAGATTCCTTCTGAATATTGTAGTCTGCCAGGGTGCGGCCATCC 665784 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||||| || || || ||||| |||||||| || | || ||||||||| Sbjct 665785 TCCAGTTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCC 665844 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 || ||| ||||| | | | || | ||| | || || || | ||||| || Sbjct 665845 TGGAT-TTTGGCTTTCACGTTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGATAGT 665903 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||| || || || || |||||||| |||||||| Sbjct 665904 TTTCCCCGTAAGTGTCTTCACAAATATCTGCAT 665936 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| |||||||| |||||||||||||| ||| ||| |||| Sbjct 530162 AGAACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCGGAGAGCGTTCGGCCGTCC 530103 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||| ||||| ||||| || |||| |||||| || || | | ||||| || Sbjct 530102 TCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGATCCGGTGGGATTCCTTCCTTATCC 530043 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 || || ||| | | | |||| ||||| || ||||| | || || || Sbjct 530042 TGGATTTTAGACTTAACGTTTTCAATCGTATCGGAGCTCTCCACGTCAAGGGTTATTGTC 529983 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||||||||| || || ||||| ||||||||| Sbjct 529982 TTGCCGGTGAGGGTCTTGACAAATATCTGCATC 529950 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||||| ||| ||| ||||| || ||||| || | || ||| | || Sbjct 666409 AGCACAAGGTGTAGGGTAGATTCCTTCTGGATATTGTAATCAGCAAGGGTTCGGCCATCC 666468 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296 || | |||||| || || || || |||| ||| || || | |||| | || ||||||||| Sbjct 666469 TCTAGCTGCTTTCCGGCAAAGATCAGCCTCTGTTGATCCGGCGGG-ATGCCCTCCTTGTC 666527 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 |||||| ||| | | | | || | ||| | || || || | |||||||| Sbjct 666528 CTGTATCTTAGCCTTCACGTTGTCGATGGTATCAGAACTCTCCACCTCAAGGGTGATGGT 666587 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| ||||| ||||| || |||||||||||| Sbjct 666588 CTTGCCTGTGAGGGTTTTGACGAAGATCTGCATC 666621 >seq2 Length=81761211 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| | || ||| | || |||| ||||||||| ||||| Sbjct 19640948 TCCTTCTGGATGTTGTAGTCTGCAAGGGTACGACCATCCTCCAGCTGCTTGCCGGCGAAG 19641007 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316 || | || ||||| ||| || | || ||| || || || ||||| ||| | | Sbjct 19641008 ATCAACCTTTGCTGATCGGGAGGGATGCCCTCTTTATC--CTGAATTTTGGCCTTCACGT 19641065 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 || | || | || | ||| || || | ||||| || || ||||||||||| |||| Sbjct 19641066 CGTCGATGGTGTCTGAGCTTTCAACCTCTAGGGTGATAGTCTTACCGGTGAGAGTCTTCA 19641125 Query 34377 CAAAGATCTGCATC 34390 | |||||||||||| Sbjct 19641126 CGAAGATCTGCATC 19641139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322719268375040