Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq876 116 3e-21
seq2 114 1e-20
seq921 95.1 1e-14
seq640 84.2 2e-11
seq700 82.4 6e-11
>seq876
Length=1913211
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||| ||||| |||||||||||| || || |||| || || ||||||||||||||
Sbjct 530598 CTCTTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAA 530539
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||||| ||| ||||| || || | ||||| |||||| |||||| ||||||
Sbjct 530538 AATCAACCTCTGCTGGTCCGGTGGGATGCCCTCTTTGTCCTGGATTTTTGACTTAACGAT 530479
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| || |||||| || | ||||| |||||||| || || || || ||
Sbjct 530478 TTCGATGGTGTCGGAACTCTCCACGTCGAGAGTAATGGTCTTGCCAGTGAGGGTTTTGAC 530419
Query 45325 AAAGATTTGCAT 45336
|||||| |||||
Sbjct 530418 AAAGATCTGCAT 530407
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
||||||||||||||||||||| || ||| |||| || || || || ||||||||
Sbjct 531053 TCCTTCTGAATGTTGTAGTCGGCAAGGGTACGAGCGTCCTCAAGCTGCTTACCGGCGAAG 530994
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
||||||| || ||||| || | | |||||||||||| || || ||| || |
Sbjct 530993 ATCAACCTTTGCTGGTCCGGTGAAAGTCCCTCCTTGTCCTGGATCTTCGACTTCACTATC 530934
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| ||| |||| | ||||||||| | |||||| |||||||| || || || || |||
Sbjct 530933 TCGACGGTGTCAGAGCTCTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGGGTTTTGACA 530874
Query 45326 AAGATTTGCAT 45336
|| || |||||
Sbjct 530873 AAAATCTGCAT 530863
>seq2
Length=81761211
Score = 114 bits (126), Expect = 1e-20
Identities = 143/196 (73%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||||||||||||||||||| || |||| | || || || || || || || ||
Sbjct 19641500 CTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCAAA 19641559
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||||| || || || || || | ||||||||||||| ||||| ||||||
Sbjct 19641560 AATCAACCTTTGCTGATCCGGTGGGATACCCTCCTTGTCCTGGATTTTGGCCTTAACGTT 19641619
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | || | |||||||| | ||| ||||||||||| || |||||||||||
Sbjct 19641620 GTCGATGGTATCAGAGCTTTCCACCTCGAGGGTGATCGTCTTGCCAGTAAGAGTCTTCAC 19641679
Query 45325 AAAGATTTGCATGTTG 45340
||||| ||||| |||
Sbjct 19641680 GAAGATCTGCATCTTG 19641695
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| ||||||||| ||||||||||| ||| ||| | || || |||||
Sbjct 19640707 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGCCCATCCTCAAGTTG 19640766
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|||||||| || || | || ||| ||||| ||||| | ||||||||||| || ||
Sbjct 19640767 CTTTCCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTT 19640826
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
|| || | | | ||||| | ||| ||||||| |||||| ||||| || ||
Sbjct 19640827 GGCTTTCACGTTATCGATGGTGTCCGAGCTCTCAACCTCCAAGGTAATGGTCTTCCCAGT 19640886
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
||||||||||| ||||| |||||
Sbjct 19640887 AAGAGTCTTCACGAAGATCTGCAT 19640910
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| || |||| | || || | ||| || ||| ||||||||| |||||||||||
Sbjct 19640912 CCTCCCCTCAGACGTAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGCA 19640971
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || ||||| || || |||||||| ||||||| || || ||||||||
Sbjct 19640972 AGGGTACGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAACCTTTGCTGATCGGGAGGG 19641031
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||||| || ||| |||||| ||| || | | | | |||| | || |||
Sbjct 19641032 ATGCCCTCTTTATCCTGAATTTTGGCCTTCACGTCGTCGATGGTGTCTGAGCTTTCAACC 19641091
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | ||| || ||||| || || ||||||||||| ||||| |||||
Sbjct 19641092 TCTAGGGTGATAGTCTTACCGGTGAGAGTCTTCACGAAGATCTGCAT 19641138
>seq921
Length=516242
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| ||||||||||| || ||| | || ||||| || || ||||||||
Sbjct 186650 CTCCTTCTGGATGTTGTAGTCTGCAAGGGTACGACCATCCTCCAGCTGCTTGCCGGCGAA 186709
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||||| || || || ||||| | ||||| || || |||||| ||| ||
Sbjct 186710 GATCAACCTTTGCTGATCTGGAGGGATGCCCTCTTTATCTTGAATTTTGGCCTTCACTTT 186769
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| | || ||||| | ||| || ||||| || || |||||||||||
Sbjct 186770 GTCGATGGTGTCTGAGCTTTCAACCTCTAGGGTGATAGTCTTACCGGTGAGAGTCTTCAC 186829
Query 45325 AAAGATTTGCAT 45336
|||||| |||||
Sbjct 186830 AAAGATCTGCAT 186841
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/196 (69%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||| ||||||||||||||| || || | || || || ||||| || || ||
Sbjct 187103 CTCCTTTTGAATGTTGTAGTCGGCAAGGGTATGACCATCCTCAAGCTGTTTGCCAGCAAA 187162
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||||| || || || || | | | | |||||| || ||||| ||||||
Sbjct 187163 AATCAACCTTTGCTGATCCGGTGAGATATCGTCCTTGCCCTGGATTTTAGCCTTAACGTT 187222
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | || | |||||||| | ||| || |||||||| || |||||||||||
Sbjct 187223 ATCGATGGTATCAGAGCTTTCCACCTCGAGGGTGATTGTCTTGCCTGTGAGAGTCTTCAC 187282
Query 45325 AAAGATTTGCATGTTG 45340
||||| ||||| |||
Sbjct 187283 GAAGATCTGCATCTTG 187298
>seq640
Length=221176
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/208 (70%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| ||||| ||||||||||| ||||| ||| || || |||| || || ||
Sbjct 161968 GTGAAGCGTCGATTCCTTCTGAATATTGTAATCGGCGAGGGTACGGCCGTCCTCAAGCTG 162027
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || || || || || ||||| || || || || | |||||||||||| || | |
Sbjct 162028 CTTCCCAGCAAAGATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAA-TCT 162086
Query 45253 TTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCG 45311
| |||| | || | | | ||||| ||||||||| | ||| || ||||| ||||
Sbjct 162087 TCGCTTTAACGTTGTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTCCCCG 162146
Query 45312 TCAGAGTCTTCACAAAGATTTGCATGTT 45339
| || || || || ||||||||||| ||
Sbjct 162147 TTAGGGTTTTGACGAAGATTTGCATCTT 162174
>seq700
Length=617226
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| || || ||||| || ||| | || || || || |||||||||||
Sbjct 335060 CTCCTTCTGGATATTATAGTCAGCTAGAGTGCGTCCATCCTCGAGCTGCTTTCCGGCGAA 335001
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | || || ||||| || || | || ||||||||| || || ||||||
Sbjct 335000 GATAAGGCGTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTT 334941
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| ||||||||||| ||| |||||||| ||||| || || || ||
Sbjct 334940 GTCAATGGTGTCGGATGACTCCACCTCCAGGGTGATCGTCTTCCCCGTTAGGGTTTTTAC 334881
Query 45325 AAAGATTTGCATGTTGCC 45342
||||| ||||| || ||
Sbjct 334880 GAAGATCTGCATCTTTCC 334863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394643854921264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |