Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq876 96.9 3e-15 seq700 95.1 1e-14 seq202 89.7 5e-13 >seq876 Length=1913211 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||| | ||| | ||| | ||||||||||| || ||||| || ||| | || | Sbjct 530166 ACGAAGAACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCGGAGAGCGTTCGGCC 530107 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||| || |||||||| ||||| ||||||| | |||||||| || || || ||||| || Sbjct 530106 GTCCTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGATCCGGTGGGATTCCTTCCTT 530047 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || |||||| || | | ||| | || |||| | |||||| |||| ||| | Sbjct 530046 ATCCTGGATTTTAGACTTAACGTTTTCAATCGTATCGGAGCTCTCCACGTCAAGGGTTAT 529987 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||| | || || || ||||| ||||| Sbjct 529986 TGTCTTGCCGGTGAGGGTCTTGACAAATATCTGCAT 529951 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| ||||| || || ||||| || || || || |||| || || || || Sbjct 665733 GTGAAGAGTAGATTCCTTCTGAATATTGTAGTCTGCCAGGGTGCGGCCATCCTCCAGTTG 665792 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || |||||| ||||||| |||||||| || ||||| ||||| || ||||| |||||| Sbjct 665793 CTTGCCAGCAAAGATCAGCCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATTTT 665852 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 ||| | | || | || || | | ||||||||||| ||| | || || || || Sbjct 665853 GGCTTTCACGTTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGATAGTTTTCCCCGT 665912 Query 139741 CAACGTTTTTACGAATATTTGCATA 139765 | || || || ||||| |||||| Sbjct 665913 AAGTGTCTTCACAAATATCTGCATA 665937 >seq700 Length=617226 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GC 139595 ||| ||||| | || | || | ||| | || ||||| || || || ||||| || || Sbjct 335096 GCCACCTCGAAGGCGAAGGACGAGGTGGAGGGTCGACTCCTTCTGGATATTATAGTCAGC 335037 Query 139596 TCATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | | |||| || | || |||||||| || || || |||| || |||||||| || || Sbjct 335036 T-AGAGTGCGTCCA-TCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGTTGCTGGTCCGGT 334979 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || |||||||| ||||| ||| || || | | || | ||||||| | |||| Sbjct 334978 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCAATGGTGTCGGATGACTCC 334919 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | ||| | |||||| || || | ||||||||||| || ||||| Sbjct 334918 ACCTCCAGGGTGATCGTCTTCCCCGTTAGGGTTTTTACGAAGATCTGCAT 334869 >seq202 Length=4793652 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| | ||||| || || ||||| || ||||||||||| || |||| || || Sbjct 4329558 AACAAGGTGAAGTGTCGATTCTTTCTGGATGTTATAATCAGCCAGCGTGCGACCATCCTC 4329499 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 ||||||||| || ||| |||| ||||| |||||||| ||||| ||||| || || || | Sbjct 4329498 GAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGATCAGGAGGAATGCCCTCCTTATC-CT 4329440 Query 139675 GATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733 || | || | || | | || | ||| || | | || ||||||| ||| | |||| Sbjct 4329439 GAATCTTCGCCTTCACGTTATCAATTGTATCAGAGCTTTCTACCTCAAGGGTGATGGTCT 4329380 Query 139734 TGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | || || | || || || || |||||||| Sbjct 4329379 TTCCAGTAAGAGTCTTCACAAAGATTTGCAT 4329349 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 ||||| || | || | |||||||| || |||||||||||||| | ||||| Sbjct 4328784 CGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCTGCAAGTGTGCGGCCA 4328725 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || ||||| || |||||| | || | | ||||| || ||||| |||||||||||| Sbjct 4328724 TCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGAGGAATGCCTTCTTTG 4328665 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||||| | ||| || |||| || | | Sbjct 4328664 TCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCAACTTCAAGAGTGATC 4328605 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || || | || || || || || |||||| Sbjct 4328604 GTCTTACCAGTTAGGGTCTTCACAAAAATCTGCATA 4328569 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 || || || || | ||| | || | ||| | || || || || |||||||| ||||| Sbjct 4329027 TGACCACCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAATCC 4328968 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | |||| || || ||||| || |||||| |||| || | |||||| || ||| Sbjct 4328967 GCAAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATAAGTCTTTGCTGGTCCGGA 4328908 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || |||||||||||||| || || || | | || | ||||| | | ||| Sbjct 4328907 GGGATGCCTTCTTTGTCCTGTATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTCTCA 4328848 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || |||| || | ||||||||||| | ||| || ||||| || |||||| || Sbjct 4328847 ACTTCAAGAGTGATTGTCTTGCCGGTAAGCGTCTTCACGAAAATCTGCATACCT 4328794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495508507532800