Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq36 161 1e-34 seq468 111 2e-19 seq403 109 8e-19 >seq36 Length=6822877 Score = 161 bits (178), Expect = 1e-34 Identities = 412/624 (66%), Gaps = 5/624 (1%) Strand=Plus/Plus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || ||| || || || |||||||| ||||| || | | ||| || |||||||||| Sbjct 1783595 ACAGCAGACACGCAAAGTCACAGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTGGAAA 1783654 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 | ||||| || |||||||| || | ||| || ||||| || |||| |||| || ||| Sbjct 1783655 AAGTGAGACCAGGCATTAGCCCTCTCTTCTTCAGCCAGAAGATGG-CGCAGAAACTACCA 1783713 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 || |||||||| || || || ||||| |||| || || |||| || || || | Sbjct 1783714 GAGAAGAAGATGCCCTCAACGCAAGCAAATGCAAGAATTCGCTCTGCAAAAGAATCGGAG 1783773 Query 50131 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 50190 | | ||||| ||||||| | ||||| || || || | || || || Sbjct 1783774 GCGTCGATCCAGCGGAGAGCCCACTGTGCCTTGCGGGCGACGCAGGGAACGGTCTCGATA 1783833 Query 50191 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA 50250 |||| ||||| | ||| || ||||| | || || |||| | || || Sbjct 1783834 GCATGGAAGAGGTGCGATTTCTCTGCGGAGTCTTTGATGTAGGTTTCGAGAAGCAGGCTG 1783893 Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310 ||||| || || || |||||||| ||||| ||||||||||| |||||| | ||||| Sbjct 1783894 TACATCTCGGAGTGGATGTTTTCGATGGCGATCTGAAATCCATAGAAAGCGCGCGCCTCC 1783953 Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370 | | ||| || || || || |||| | || || || |||||||| Sbjct 1783954 GGGAGCTGTACCTCCCGCATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCCGTCGGAA 1784013 Query 50371 GCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAG---TTTA 50427 || || || || || | || || ||| ||||| ||||| || || || || | Sbjct 1784014 GCGGCGAAGAAAGCGAGAACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAGGGATTCA 1784073 Query 50428 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCT 50487 ||||| | || ||||| || | ||| |||||||| ||||||| || || || || Sbjct 1784074 TTCCAGTGGCGGAGATCTTGGGACAGATCAACTTCTTCTGCTGTCCAGAAAGAGGCTTCG 1784133 Query 50488 GCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTT 50547 || || || ||||| | |||||| | | | || |||| || || || || | | Sbjct 1784134 GCTTTCTTGTACATCTCCCAGATCTGAGGGTAGCGGATCGGAAACATGCAGAAGCGGTCA 1784193 Query 50548 GGATTTGGTGCAAGGATCGGTTCC 50571 |||||||| ||||||| || ||| Sbjct 1784194 GGATTTGGAGCAAGGAGGGGCTCC 1784217 >seq468 Length=902046 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 || || ||||| | |||| |||||||| |||| |||| | |||||| |||| ||| ||| Sbjct 790168 CCCCCTTGATCAACATATCGAGCGGTGTCATTAAAAACACGCAACATGGGAACAATGCCA 790109 Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 80214 || ||||| ||||| || || ||||| ||||| |||||||||| ||| || || Sbjct 790108 TTCGATGTTCCATTCGTTCCACGAATATAACTTCCGGTGGCACGAATGTTATGAACAGAG 790049 Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 80274 | ||| ||||| || || || || | |||||| || | |||||||| || Sbjct 790048 ACACCAATTCCTCCAGCAGACTTGCTTATAACTGCGCACTCCTTCAGTGTATCATATATC 789989 Query 80275 CCCTCTATGCTATCATCAATCATG 80298 || || ||||||||||| ||||| Sbjct 789988 CCATCAATGCTATCATCTTTCATG 789965 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 ||| || ||||| || | |||||||||||||| ||||||||| | ||||| | || Sbjct 789176 AGTGCCTGCATTGAACAGTGTAGGAGAAGCGTGAGTAAACCATCGCTGAGACATCAAATG 789117 Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453 ||| || || || || | ||||| || ||||| || || || || | ||| || Sbjct 789116 GTATGTTCTGATTGCAGACACAATATCATCTTTGTGAATCCCAACAGCAACTCTCATCAA 789057 Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAA 80513 |||||| ||||| ||||| | || ||| | | |||||| | ||| ||| || | Sbjct 789056 CATGTGTTGAGGCCTTTCGATGACCTTCCCAGAAACTTTCAAGAGGTAGGATCGCTCGAG 788997 Query 80514 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561 ||||| ||||||||||| | ||| ||| || | || || ||||| Sbjct 788996 GGTTTTGAAACCAAAATAATCGTAGTCAAAATCCCTGTCATATATAAT 788949 >seq403 Length=1478721 Score = 109 bits (120), Expect = 8e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 ||| || ||||| ||||||||||||||||| || || ||||| |||| |||| Sbjct 384297 AGTGCCTGCATTGAATAAGGTAGGAGAAGCATGAGTGAACCACCGCAGTGACATCAGATG 384238 Query 80394 GTACGTCTCAATAGCTGATTCTATATCC-CATTGATGAATTCCTACCGCGACACGCATTA 80452 ||| || | ||| || || || ||||| |||| |||||| |||| || || | ||| | Sbjct 384237 GTAGGTTTTAATGGCAGAATCAATATCTTCATT-ATGAATCCCTATAGCAACTCTCATCA 384179 Query 80453 ACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCA 80512 |||| ||||| || ||||| || | || | || ||| || | ||||| | || | Sbjct 384178 ACATATGCTGCGGCCTTTCCACCACTTTCCCAGATACTTTTAAAAGATAAGACCTCTCGA 384119 Query 80513 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561 ||||||||||||||| || | || |||||||| || ||||| || Sbjct 384118 GAGTTTTAAAACCAAAGTAATCATAATCAAAGTCTCTATCATAAATGAT 384070 Score = 100 bits (110), Expect = 4e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153 |||||| ||||| | || | ||| || | ||| |||| | | |||||||| | ||| Sbjct 384849 TCCTCCTTGATCAACATACCGAGCAGTATCATTGAAAACCCGTAGCATTGGAACTACACC 384790 Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 ||| || |||||| ||||| | || || || ||| | |||||||| || ||| || Sbjct 384789 ATTCGAAACACCATTCGTCCCACAAATGTAACTCCCAGTCGCACGAATGTTGTGAATGGA 384730 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 | ||| ||||| || || ||| |||| ||||| ||| || |||||||| || Sbjct 384729 GACACCAATTCCGCCAGCAGATTTGCTTATTATAGCGCACTCTTTCAAGGTATCATATAT 384670 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTA 80316 || || ||||||||||| ||||| || || || |||||| Sbjct 384669 TCCTTCAATGCTATCATCTTTCATGCAAATGAGGAAGCAGCTA 384627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717464482597760