Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq36 86.0 6e-12 >seq36 Length=6822877 Score = 86.0 bits (94), Expect = 6e-12 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930 ||||||||| ||||| || ||||||||||| | | |||||| ||||| ||||| || | Sbjct 1783602 ACACGCAAAGTCACAGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTGGAAAAAGTGAG 1783661 Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA-AATGACCCGGAAAAGA 13989 || ||||| | |||| || || | ||| || || || ||| || || || |||| Sbjct 1783662 ACCAGGCATTAGCCCTCTCTTCTTCAGCCAGAAGATGGC-GCAGAAACTACCAGAGAAGA 1783720 Query 13990 ATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGA 14035 | || |||||||| |||||| || | | ||| ||| |||| || Sbjct 1783721 AGATGCCCTCAACGCAAGCAAATGCAAGAATTCGCTCTGCAAAAGA 1783766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479190800585600