Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq36 141 1e-28
seq293 116 5e-21
>seq36
Length=6822877
Score = 141 bits (156), Expect = 1e-28
Identities = 398/596 (67%), Gaps = 19/596 (3%)
Strand=Plus/Minus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
||||||| ||| | || | | | || ||||| |||||||| || || | ||||| || |
Sbjct 1784179 TGTTTCCGATCCGCTACCCTCAGATCTGGGAGATGTACAAGAAAGCCGAAGCCTCTTTCT 1784120
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACT 125114
|||| | ||||| || ||||||||| | || || | | ||| | || || | ||
Sbjct 1784119 GGACAGCAGAAGAAGTTGATCTGTCCCAAGATCTCCGCCACTGGAATGAATCCCTCACCT 1784060
Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174
|| || || | || || | ||| || | || ||||| |||| ||||| ||||||
Sbjct 1784059 CCGAC-GAACGGCATTTCGTAACCCACGTTCTCGCTTTCTTCGCCGCTTCCGACGGAATC 1784001
Query 125175 GTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTG 125233
|| || || || | || | || ||| | ||| | | || |||| | || |
Sbjct 1784000 GTTCTAGAGAACCTCGCTGGC-CGCTTCATGCGGGAGGTACAGCTCCCGGAGGCG-CGCG 1783943
Query 125234 CTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292
|||| || ||||| || ||| || || ||| | ||||| || |||||| | |||
Sbjct 1783942 CTTTCTATGGATTTCAGATCGCCATCGAAAACATCCACTCCGAGATGTAC---AGCCTGC 1783886
Query 125293 TT---GACATGTACATTCGCGA-TCCGCAACGTAAACACATGCTCTTTAACGCAATCGAC 125348
|| || | ||||| || |||||| | || | || ||||| | || |||||
Sbjct 1783885 TTCTCGAAACCTACATCAAAGACTCCGCAGAGAAATCGCAC-CTCTTCCATGCTATCGAG 1783827
Query 125349 ACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAG 125408
|| || || | | ||||| || |||| | || |||||||| | | | |
Sbjct 1783826 ACCGTTCCCTGCGTCGCCCGCAAGGCACAGTGGGCTCTCCGCTGGATCGACGCCTCCGAT 1783767
Query 125409 TCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGT 125468
|||| || || || | | ||||| || ||| |||||||||||||| || |||
Sbjct 1783766 TCTTTT---GCAGAGCGAATTCTTGCATTTGCTTGCGTTGAGGGCATCTTCTTCTCTGGT 1783710
Query 125469 AGTTT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527
||||| |||| ||||||| ||||| |||||| | || || ||||| || || ||
Sbjct 1783709 AGTTTCTGCG-CCATCTTCTGGCTGAAGAAGAGAGGGCTAATGCCTGGTCTCACTTTTTC 1783651
Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT 125583
|||||| |||| ||||| || |||||||| |||||||||||||| ||| ||||
Sbjct 1783650 CAACGAGCTTATTTCTCGTGATGAGGGCCTGCACTGTGACTTTGCGTGTCTGCTGT 1783595
>seq293
Length=413263
Score = 116 bits (128), Expect = 5e-21
Identities = 391/590 (66%), Gaps = 29/590 (5%)
Strand=Plus/Plus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
|||| || ||| | || | | | |||||||| |||||||| || || ||||||| || |
Sbjct 226521 TGTTCCCGATCCGCTACCCTCAGATTTGGGAGATGTACAAGAAAGCAGAGGCCTCTTTCT 226580
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACG--ATTGGGAG-ACTCGTTTGA 125112
|||| | |||||||||||||| || | ||| || || | ||||| || | |
Sbjct 226581 GGACTGCGGAAGAGGTCGATCTCTCACAAGAC--GTTCGGCAATGGGATCACACCCTCAC 226638
Query 125113 CTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAA 125172
|| || ||||| | ||||| | || | |||||||||| |||| || ||||| |
Sbjct 226639 CTCTGAC-GAGCGCCACTTTATCACCTACGTCCTGGCCTTCTTCGCCGCTTCTGATGGTA 226697
Query 125173 TCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAG-TTGACCATTCCAGAGGTGTCG 125231
|||| || || || ||| ||| | |||| || | | |||| |||| | ||
Sbjct 226698 TCGTGCTGGAGAACCTCGCCGGACGCTTCATGCGAGAGGTTCAAC-TTCCGGAGGCG-CG 226755
Query 125232 TGCTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACT 125290
||||| || || ||||| ||| || || ||| | ||||| || ||||| | ||
Sbjct 226756 CGCTTTCTATGGCTTCCAGATCGCCATCGAAAACATTCACTCCGAGATGTATAGTCTTCT 226815
Query 125291 GATTGACATGTACATTCGCGATCCGCAACGTAAACAC-ATGCTCTTTAACGCAATCGACA 125349
| || | ||||| || | || || ||| | | || ||| ||| ||||| |
Sbjct 226816 CCTCGAGACCTACATCAAGGACTC-CACCGAAAAATCCAATCTTTTTCGCGCCATCGAAA 226874
Query 125350 CGGTGCCGTCTATA---CGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACA 125406
| || || | | ||||| |||||| |||| | || ||||| ||||| |
Sbjct 226875 CCGTACCCTGCGTCGCCCGTAA---GGCTCAGTGGGCACTGCGCTGGAT---TGACGCC- 226927
Query 125407 AGTCT---TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTT 125463
||| || | || || | | | || || || ||| || || || ||||| |
Sbjct 226928 --TCTGAATCATTTGCTGAGCGGATTCTCGCTTTTGCGTGCGTCGAAGGTATTTTCTTCT 226985
Query 125464 CGGGTAGTTT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACG 125522
| || || || |||| ||||||| ||||||||||||||||| | ||||| || || ||
Sbjct 226986 CCGGCAGCTTCTGCG-CCATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCTCACT 227044
Query 125523 CACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572
||||||| | || ||||| |||||||| || ||||| ||||||||
Sbjct 227045 TTTTCTAACGAGCTCATCTCTCGTGACGAGGGACTCCACTGCGACTTTGC 227094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740229361907840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |