Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq202 89.7 4e-13 >seq202 Length=4793652 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTC 48573 ||||| | ||| || || |||||| |||||||| ||||| || || ||| || | || Sbjct 4328781 AACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCTGC-AAGTGTGCGGCCATC 4328723 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 ||| |||||||| || | ||||||| | |||||| ||| || | | ||| ||||| Sbjct 4328722 CTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGAGGAATGCCTTCTTTGTC 4328663 Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 | || || ||||| | ||||||| |||| ||| || | || || || Sbjct 4328662 CTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCAACTTCAAGAGTGATCGT 4328603 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || || ||||||||||||||||| Sbjct 4328602 CTTACCAGTTAGGGTCTTCACAAAAATCTGCAT 4328570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420791275833584