Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq64102 113 2e-20
seq871 100 1e-16
seq61 93.3 2e-14
seq547 86.0 3e-12
seq2 82.4 4e-11
>seq64102
Length=801759
Score = 113 bits (124), Expect = 2e-20
Identities = 78/89 (88%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
||||||| || || ||||||||| | | |||||||| |||||||||||||||||||||
Sbjct 583330 AATAAAACATTTAACTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 583271
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||| ||||||||||||||| ||||
Sbjct 583270 GACGCTCTAACCAACTGAGCTAATAGGCC 583242
>seq871
Length=2114560
Score = 100 bits (110), Expect = 1e-16
Identities = 70/79 (89%), Gaps = 1/79 (1%)
Strand=Plus/Minus
Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510
|||| ||||||||| | | |||||||| ||||||||||||||||||||||| ||||| |
Sbjct 1455600 AAATATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAAGCTCTAA 1455541
Query 11511 CCAACTGAGCTAATGGGCC 11529
|||||||||||||| ||||
Sbjct 1455540 CCAACTGAGCTAATAGGCC 1455522
>seq61
Length=1846253
Score = 93.3 bits (102), Expect = 2e-14
Identities = 73/87 (84%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 11447 AAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT--TAGCACGACG 11504
|||| || ||||||||| | | |||||||| ||||||| ||||||| ||||||||||
Sbjct 418741 AAATAAAGCTGGCCCATGCAGGTCTCGAACCTGCGACCTTAGCGTTATATTAGCACGACG 418682
Query 11505 CTCTRACCAACTGAGCTAATGGGCCGT 11531
| || ||||||||||||||| ||||||
Sbjct 418681 CCCTAACCAACTGAGCTAATAGGCCGT 418655
Score = 86.0 bits (94), Expect = 3e-12
Identities = 72/88 (82%), Gaps = 7/88 (8%)
Strand=Plus/Minus
Query 11449 ATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTC 11507
|||||| ||||||||| | | |||||||| |||||||||||||||||||||||||| |
Sbjct 413054 ATCAAAGCTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCAC 412995
Query 11508 TRAC------CAACTGAGCTAATGGGCC 11529
| || ||||||||||||| ||||
Sbjct 412994 TAACCAACAGCAACTGAGCTAATAGGCC 412967
>seq547
Length=160218
Score = 86.0 bits (94), Expect = 3e-12
Identities = 66/80 (83%), Gaps = 7/80 (9%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA-------CGCTC 11507
|||||||||| | | |||||||| ||||||||||||||||||||||| |||||
Sbjct 90075 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTTGACGCTC 90016
Query 11508 TRACCAACTGAGCTAATGGG 11527
| ||||||||||||||| ||
Sbjct 90015 TAACCAACTGAGCTAATAGG 89996
>seq2
Length=81761211
Score = 82.4 bits (90), Expect = 4e-11
Identities = 62/73 (85%), Gaps = 2/73 (3%)
Strand=Plus/Minus
Query 11457 GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACT 11516
|||||||| | | |||||||| | |||||| |||||||||| |||||||| |||||||
Sbjct 39892568 GGCCCATGTAGGTCTCGAACCT--GTCCTTCGTGTTATTAGCATGACGCTCTAACCAACT 39892511
Query 11517 GAGCTAATGGGCC 11529
|||||||| ||||
Sbjct 39892510 GAGCTAATAGGCC 39892498
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261205702600384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |