Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq64102 113 2e-20 seq871 100 1e-16 seq61 93.3 2e-14 seq547 86.0 3e-12 seq2 82.4 4e-11 >seq64102 Length=801759 Score = 113 bits (124), Expect = 2e-20 Identities = 78/89 (88%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||| || || ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 583330 AATAAAACATTTAACTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 583271 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||| |||| Sbjct 583270 GACGCTCTAACCAACTGAGCTAATAGGCC 583242 >seq871 Length=2114560 Score = 100 bits (110), Expect = 1e-16 Identities = 70/79 (89%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||||||| | | |||||||| ||||||||||||||||||||||| ||||| | Sbjct 1455600 AAATATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAAGCTCTAA 1455541 Query 11511 CCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||| Sbjct 1455540 CCAACTGAGCTAATAGGCC 1455522 >seq61 Length=1846253 Score = 93.3 bits (102), Expect = 2e-14 Identities = 73/87 (84%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 11447 AAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT--TAGCACGACG 11504 |||| || ||||||||| | | |||||||| ||||||| ||||||| |||||||||| Sbjct 418741 AAATAAAGCTGGCCCATGCAGGTCTCGAACCTGCGACCTTAGCGTTATATTAGCACGACG 418682 Query 11505 CTCTRACCAACTGAGCTAATGGGCCGT 11531 | || ||||||||||||||| |||||| Sbjct 418681 CCCTAACCAACTGAGCTAATAGGCCGT 418655 Score = 86.0 bits (94), Expect = 3e-12 Identities = 72/88 (82%), Gaps = 7/88 (8%) Strand=Plus/Minus Query 11449 ATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTC 11507 |||||| ||||||||| | | |||||||| |||||||||||||||||||||||||| | Sbjct 413054 ATCAAAGCTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCAC 412995 Query 11508 TRAC------CAACTGAGCTAATGGGCC 11529 | || ||||||||||||| |||| Sbjct 412994 TAACCAACAGCAACTGAGCTAATAGGCC 412967 >seq547 Length=160218 Score = 86.0 bits (94), Expect = 3e-12 Identities = 66/80 (83%), Gaps = 7/80 (9%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA-------CGCTC 11507 |||||||||| | | |||||||| ||||||||||||||||||||||| ||||| Sbjct 90075 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTTGACGCTC 90016 Query 11508 TRACCAACTGAGCTAATGGG 11527 | ||||||||||||||| || Sbjct 90015 TAACCAACTGAGCTAATAGG 89996 >seq2 Length=81761211 Score = 82.4 bits (90), Expect = 4e-11 Identities = 62/73 (85%), Gaps = 2/73 (3%) Strand=Plus/Minus Query 11457 GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACT 11516 |||||||| | | |||||||| | |||||| |||||||||| |||||||| ||||||| Sbjct 39892568 GGCCCATGTAGGTCTCGAACCT--GTCCTTCGTGTTATTAGCATGACGCTCTAACCAACT 39892511 Query 11517 GAGCTAATGGGCC 11529 |||||||| |||| Sbjct 39892510 GAGCTAATAGGCC 39892498 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261205702600384