Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq89584 479 5e-130 seq374 190 3e-43 seq2 190 3e-43 seq64191 187 4e-42 >seq89584 Length=148959 Score = 479 bits (530), Expect = 5e-130 Identities = 676/948 (71%), Gaps = 4/948 (0%) Strand=Plus/Minus Query 211612 GGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACATGCTTTATCGTA 211671 || |||||||||||| | |||||||| | | | | ||||| | |||||| | Sbjct 1095 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATCATT 1036 Query 211672 GCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTTCA 211731 || ||||| || || ||||| || ||||| || || || |||||||| || |||| || Sbjct 1035 GCCTTCATTGCTGCCCCTCCAGTCGATATTGATGGTATTCGTGAACCTGTTTCTGGGTCT 976 Query 211732 TTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGT 211791 | | ||||| ||||| || ||||| ||||| || |||| |||| || || ||| Sbjct 975 CTACTTTATGGAAACAATATTATCTCAGGTGCCATTATTCCTACTTCCGCAGCTATAGGT 916 Query 211792 TTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTGGT 211851 || || || || || || |||||||||||| || ||||||||||| | |||||||| ||| Sbjct 915 TTGCATTTTTACCCAATATGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGT 856 Query 211852 CCTTACCAGTTGGTAATCTTC--CACTTCCTTATCGGAATCTCAGCATACATGGGAAGAC 211909 ||||| | | || | ||| ||||| | | || | | |||||||| | Sbjct 855 CCTTATGAACT--TATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTG 798 Query 211910 AGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCAC 211969 ||||||||||| | |||| | |||||||| |||||||| |||||| |||||||| | Sbjct 797 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTC 738 Query 211970 CTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAG 212029 |||| | || ||| ||||| ||| | | ||||| | ||||| || ||||| | Sbjct 737 CTGTTGCGGCTGCTACAGCTGTTTTCTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTG 678 Query 212030 ACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAAC 212089 | |||||||||||||| ||||| || || |||||||||||| | |||||||| ||||| | Sbjct 677 ATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCAGAGC 618 Query 212090 ATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCAT 212149 | ||||| |||||||| ||||| || ||| ||| || || ||| | ||||| || | Sbjct 617 ACAACATTCTTATGCATCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCC 558 Query 212150 TATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTT 212209 ||||| ||||||||| |||||| | || || ||| | ||| | |||||||||| Sbjct 557 TATTCAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTAATCAGGGAAACCACTGAAA 498 Query 212210 TAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTG 212269 || || || | ||||||| || || ||||| ||||| || ||||| || || | Sbjct 497 ATGAGTCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAG 438 Query 212270 CTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAA 212329 | || ||||| || || || || | |||||||| ||||| |||||||| | | Sbjct 437 CCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCCCGTT 378 Query 212330 GTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTA 212389 || || |||||| | || | |||||||| | || | ||||| || || |||||| Sbjct 377 CCTTGCATTTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTGGGTA 318 Query 212390 TCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCAT 212449 | | || ||||| |||||| | || || || || || |||||||| || |||||| Sbjct 317 TTAGTACTATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAATCCGTAGTTGATAGCC 258 Query 212450 CAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAG 212509 |||| ||| || ||||||| |||| | | || | || || ||||||||||||| Sbjct 257 AAGGTCGTGTTATTAACACTTGGGCTGATATCATAAATCGTGCTAATCTTGGTATGGAAG 198 Query 212510 TTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGCATCTG 212557 | ||||| ||| | ||||||||||||||||| || || |||| |||| Sbjct 197 TAATGCATGAACGTAATGCACACAACTTCCCTCTAGATCTAGCTTCTG 150 >seq374 Length=1248919 Score = 190 bits (210), Expect = 3e-43 Identities = 287/408 (70%), Gaps = 0/408 (0%) Strand=Plus/Plus Query 212150 TATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTT 212209 ||||| ||||||||| |||||| | || || ||| | ||| | |||||||||| Sbjct 600784 TATTCAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTAATCAGGGAAACCACTGAAA 600843 Query 212210 TAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTG 212269 || || || | ||||||| || || ||||| ||||| || ||||| || || | Sbjct 600844 ATGAGTCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAG 600903 Query 212270 CTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAA 212329 | || ||||| || || || || | |||||||| ||||| |||||||| | | Sbjct 600904 CCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCCCGTT 600963 Query 212330 GTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTA 212389 || || |||||| | || | |||||||| | || | ||||| || || |||||| Sbjct 600964 CCTTGCATTTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTGGGTA 601023 Query 212390 TCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCAT 212449 | | || ||||| |||||| | || || || || || |||||||| || |||||| Sbjct 601024 TTAGTACTATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAATCCGTAGTTGATAGCC 601083 Query 212450 CAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAG 212509 |||| ||| || ||||||| |||| | | || | || || ||||||||||||| Sbjct 601084 AAGGTCGTGTTATTAACACTTGGGCTGATATCATAAATCGTGCTAATCTTGGTATGGAAG 601143 Query 212510 TTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGCATCTG 212557 | ||||| ||| | ||||||||||||||||| || || |||| |||| Sbjct 601144 TAATGCATGAACGTAATGCACACAACTTCCCTCTAGATCTAGCTTCTG 601191 >seq2 Length=81761211 Score = 190 bits (210), Expect = 3e-43 Identities = 287/408 (70%), Gaps = 0/408 (0%) Strand=Plus/Plus Query 212150 TATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTT 212209 ||||| ||||||||| |||||| | || || ||| | ||| | |||||||||| Sbjct 48005778 TATTCAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTAATCAGGGAAACCACTGAAA 48005837 Query 212210 TAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTG 212269 || || || | ||||||| || || ||||| ||||| || ||||| || || | Sbjct 48005838 ATGAGTCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAG 48005897 Query 212270 CTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAA 212329 | || ||||| || || || || | |||||||| ||||| |||||||| | | Sbjct 48005898 CCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCCCGTT 48005957 Query 212330 GTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTA 212389 || || |||||| | || | |||||||| | || | ||||| || || |||||| Sbjct 48005958 CCTTGCATTTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTGGGTA 48006017 Query 212390 TCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCAT 212449 | | || ||||| |||||| | || || || || || |||||||| || |||||| Sbjct 48006018 TTAGTACTATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAATCCGTAGTTGATAGCC 48006077 Query 212450 CAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAG 212509 |||| ||| || ||||||| |||| | | || | || || ||||||||||||| Sbjct 48006078 AAGGTCGTGTTATTAACACTTGGGCTGATATCATAAATCGTGCTAATCTTGGTATGGAAG 48006137 Query 212510 TTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGCATCTG 212557 | ||||| ||| | ||||||||||||||||| || || |||| |||| Sbjct 48006138 TAATGCATGAACGTAATGCACACAACTTCCCTCTAGATCTAGCTTCTG 48006185 Score = 84.2 bits (92), Expect = 4e-11 Identities = 121/169 (72%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 211807 ATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTGGTCCTTACCAGTTGGTA 211866 || ||||||||| || || ||||||||||| | |||||||| |||||||| | | || Sbjct 22128489 ATATGGGAAGCAACATCTATTGATGAGTGGTTATACAATGGCGGTCCTTATGAAAT--TA 22128546 Query 211867 ATCTTC--CACTTCCTTATCGGAATCTCAGCATACATGGGAAGACAGTGGGAACTTTCAT 211924 | ||| ||||| | || || | | |||||||| | ||||||||||| | Sbjct 22128547 TTGTTCTACACTTTTTAATTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTT 22128606 Query 211925 ACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCACCTGT 211973 || | ||||||| |||||||| |||||| |||||||| ||||| Sbjct 22128607 TCCATCAGGGTATGCACCCTTGGATTGTTGTTGCATATTCAGCTCCTGT 22128655 >seq64191 Length=168564 Score = 187 bits (206), Expect = 4e-42 Identities = 339/489 (69%), Gaps = 8/489 (2%) Strand=Plus/Plus Query 211612 GGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACATGC-TTTATCGT 211670 || || |||||| || | |||||||| | | | | ||||| |||| |||||| | Sbjct 58598 GGATGATTTGGTATTTTGATGATCCCTACTTTATTGACCGCAACTT-ATGCATTTATCAT 58656 Query 211671 AGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTTC 211730 || ||||| || || |||| | ||||| || || || |||||||| || |||| || Sbjct 58657 TGCCTTCATTGCTGCCTCTCCAGCCGATATTGATGGTATTCGTGAACCTGTTTCTGGGTC 58716 Query 211731 ATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGG 211790 | | ||||| ||||| || ||||| ||| || |||| |||| || || || Sbjct 58717 TCTACTTTATGGAAACAATATTATCTCAAGTGTCATTATTCCTACTTCCGCAGCTATAGG 58776 Query 211791 TTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTGG 211850 ||| || || || || || ||||||| || | || ||||||||||| | ||||| || Sbjct 58777 TTTGCATTTTTACCCAATATGGGAAGTAGAATCTGTTGATGAGTGGTTATACAACAACGG 58836 Query 211851 TCCTTACCAGTTGGTAATCTTCCA--CTTCCTTATCGGAATCTCAGCATACATGGGAAGA 211908 |||||| | | || | ||| | ||| | | || | | |||||||| | Sbjct 58837 TCCTTATGAACT--TATTGTTCTATACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGT 58894 Query 211909 CAGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCA 211968 ||||||||||| | |||| | |||||| | |||||||| |||||| |||||||| Sbjct 58895 GAGTGGGAACTTAGTTTCCGTCTGGGTATGTGCCCTTGGATTGCTGTTGCATATTCAGCT 58954 Query 211969 CCTGTATCAGCAGCTTTCGCTGTATTCCTTG-TTTACCCATTCGGTCAGGGTTCATTCTC 212027 ||||| | || ||| |||| || |||| | ||||| | || || || ||||| Sbjct 58955 CCTGTTGCGGCTGCTACAACTGT-TTACTTGATCTACCCTATTGGCCAAGGAAGTTTCTC 59013 Query 212028 AGACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGA 212087 || |||||||||||||| ||||| || | |||||||||||| | |||| ||| |||| Sbjct 59014 TGATGGTATGCCTTTAGGAATATCTGGTAATTTCAACTTCATGATTGTATGCCAGTCAGA 59073 Query 212088 ACATAACAT 212096 || ||||| Sbjct 59074 GCACAACAT 59082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 806650899687040