Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq36 136 1e-26
seq468 91.5 4e-13
>seq36
Length=6822877
Score = 136 bits (150), Expect = 1e-26
Identities = 308/462 (67%), Gaps = 12/462 (3%)
Strand=Plus/Minus
Query 22479 TTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGC 22538
||| || || || || || ||||||||||| ||||| ||||| ||||| |||||
Sbjct 1783767 TTCTTTTGCAGAGCGAATTCTTGCATTTGCTTGCGTTGAGGGCATCTTCTTCTCTGGTAG 1783708
Query 22539 ATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAA 22598
|| || || ||||| ||||| || || | | | ||||| ||||| || ||||| ||
Sbjct 1783707 TTTCTGCGCCATCTTCTGGCTGAAGAAGAGAGGGCTAATGCCTGGTCTCACTTTTTCCAA 1783648
Query 22599 TGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAA 22658
||| | ||| || |||||||| || || || ||||||||| |||| || |
Sbjct 1783647 CGAGCTTATTTCTCGTGATGAGGGCCTGCACTGTGACTTTGCGTGTCTGCTGTACAG--- 1783591
Query 22659 TCATATCATTCATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGA 22718
|| ||| | |||| || | | || | || || ||| || | |||| || ||
Sbjct 1783590 TCTGCTCAATAATAAGCTCTCTGAGGATAGGGTTAGAGAGATTGTTGCTGATGCTGTAGA 1783531
Query 22719 ACTTGAACGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGA 22778
| || | ||| |||| || || || ||| | || || || || ||
Sbjct 1783530 TATAGAGAGGGAGTTTGTTTGTGACGCT---CC------TCTTGTGGGGATGAACGCTGA 1783480
Query 22779 ATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGC 22838
||||||| || || | |||||||| |||||||| | | | | ||||| |
Sbjct 1783479 TCTAATGAGTCAGTACATAGAGTTTGTTGCCGATCGTCTTCTTGGTGCTTTAGGTTACGG 1783420
Query 22839 AAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAA 22898
||| || | || ||||||||||| |||||||| |||||||| ||| |||| ||
Sbjct 1783419 TAAGATGTACGAGGTATCGAATCCATTTGACTGGATGGAGCTTATTTCTCTTCAAGGGAA 1783360
Query 22899 GACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGC 22940
||| || |||||||| ||||| || ||||||||||| || ||
Sbjct 1783359 GACAAACTTCTTCGAGAAAAGGGTCGGTGAATACCAGAAGGC 1783318
>seq468
Length=902046
Score = 91.5 bits (100), Expect = 4e-13
Identities = 155/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
||||| || ||| ||| || || || | ||| ||||| ||| | || || |||| |
Sbjct 789966 ATGAAAGATGATAGCATTGATGGGATATATGATACACTGAAGGAGTGCGCAGTTATAAGC 790025
Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTTACAT 363740
||| ||| || ||||||||||| || | || || |||||| ||| | | ||||| ||
Sbjct 790026 AAGTCTGCTGGAGGAATTGGTGTCTCTGTTCATAACATTCGTGCCACCGGA-AGTTATAT 790084
Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800
||| || || ||| |||||||| | ||||||||| | ||||| ||| | | ||
Sbjct 790085 TCGTGGAACGAATGGAACATCGAATGGCATTGTTCCCATGTTGCGTGTTTTTAATGACAC 790144
Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGC 363842
|| | || || || || || || |||||| | ||||| ||
Sbjct 790145 CGCTCGATATGTTGATCAAGGGGGTGGAAAGAGGAAAGGTGC 790186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1301857617254688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |