Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq36 136 1e-26 seq468 91.5 4e-13 >seq36 Length=6822877 Score = 136 bits (150), Expect = 1e-26 Identities = 308/462 (67%), Gaps = 12/462 (3%) Strand=Plus/Minus Query 22479 TTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGC 22538 ||| || || || || || ||||||||||| ||||| ||||| ||||| ||||| Sbjct 1783767 TTCTTTTGCAGAGCGAATTCTTGCATTTGCTTGCGTTGAGGGCATCTTCTTCTCTGGTAG 1783708 Query 22539 ATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAA 22598 || || || ||||| ||||| || || | | | ||||| ||||| || ||||| || Sbjct 1783707 TTTCTGCGCCATCTTCTGGCTGAAGAAGAGAGGGCTAATGCCTGGTCTCACTTTTTCCAA 1783648 Query 22599 TGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAA 22658 ||| | ||| || |||||||| || || || ||||||||| |||| || | Sbjct 1783647 CGAGCTTATTTCTCGTGATGAGGGCCTGCACTGTGACTTTGCGTGTCTGCTGTACAG--- 1783591 Query 22659 TCATATCATTCATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGA 22718 || ||| | |||| || | | || | || || ||| || | |||| || || Sbjct 1783590 TCTGCTCAATAATAAGCTCTCTGAGGATAGGGTTAGAGAGATTGTTGCTGATGCTGTAGA 1783531 Query 22719 ACTTGAACGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGA 22778 | || | ||| |||| || || || ||| | || || || || || Sbjct 1783530 TATAGAGAGGGAGTTTGTTTGTGACGCT---CC------TCTTGTGGGGATGAACGCTGA 1783480 Query 22779 ATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGC 22838 ||||||| || || | |||||||| |||||||| | | | | ||||| | Sbjct 1783479 TCTAATGAGTCAGTACATAGAGTTTGTTGCCGATCGTCTTCTTGGTGCTTTAGGTTACGG 1783420 Query 22839 AAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAA 22898 ||| || | || ||||||||||| |||||||| |||||||| ||| |||| || Sbjct 1783419 TAAGATGTACGAGGTATCGAATCCATTTGACTGGATGGAGCTTATTTCTCTTCAAGGGAA 1783360 Query 22899 GACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGC 22940 ||| || |||||||| ||||| || ||||||||||| || || Sbjct 1783359 GACAAACTTCTTCGAGAAAAGGGTCGGTGAATACCAGAAGGC 1783318 >seq468 Length=902046 Score = 91.5 bits (100), Expect = 4e-13 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| ||| || || || | ||| ||||| ||| | || || |||| | Sbjct 789966 ATGAAAGATGATAGCATTGATGGGATATATGATACACTGAAGGAGTGCGCAGTTATAAGC 790025 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTTACAT 363740 ||| ||| || ||||||||||| || | || || |||||| ||| | | ||||| || Sbjct 790026 AAGTCTGCTGGAGGAATTGGTGTCTCTGTTCATAACATTCGTGCCACCGGA-AGTTATAT 790084 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || || ||| |||||||| | ||||||||| | ||||| ||| | | || Sbjct 790085 TCGTGGAACGAATGGAACATCGAATGGCATTGTTCCCATGTTGCGTGTTTTTAATGACAC 790144 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGC 363842 || | || || || || || || |||||| | ||||| || Sbjct 790145 CGCTCGATATGTTGATCAAGGGGGTGGAAAGAGGAAAGGTGC 790186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301857617254688