Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq258 114 1e-20
seq202 114 1e-20
seq876 111 1e-19
seq640 100 2e-16
seq2 87.8 2e-12
>seq258
Length=1945713
Score = 114 bits (126), Expect = 1e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151
||||| ||||| ||||||||||| ||||| || | |||||||| || ||||| ||||||
Sbjct 1660425 GACAAGGAAGGCATTCCACCTGATCAACAACGTTTGATTTTTGCTGGGAAACAGTTAGAA 1660484
Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211
|||| ||| || | | |||||||| ||||| || || || || || |||||||| |
Sbjct 1660485 GATGGTCGGACCTTAGCAGATTACAACATTCAGAAGGAGTCAACTCTCCATTTAGTTTTG 1660544
Query 25212 AGGCTAAGAGGAGGAA 25227
||||| ||||| ||||
Sbjct 1660545 AGGCTTAGAGGTGGAA 1660560
>seq202
Length=4793652
Score = 114 bits (126), Expect = 1e-20
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| |||||||| || || | || || || | |||||| | ||||| ||| ||
Sbjct 4329121 ATGCAGATATTTGTGAAAACCCTCACTGGAAAGACAATCACACTTGAAGTTGAGAGCTCC 4329180
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| |||||| || || || ||||||||||| ||||
Sbjct 4329181 GACACTATTGA--CAATGTTAAGGCTAAAATCCAAGATAAGGAGGGGATTCCACCGGACC 4329238
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||||| | |||||||| || || || | || |||| |||||| | | || ||||
Sbjct 4329239 AGCAGCGCCTCATTTTTGCTGGTAAGCAGCTTGAGGATGGTCGCACCCTTGCGGACTACA 4329298
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||||| || ||||| || || ||| | |||||
Sbjct 4329299 ATATTCAGAAGGAATCTACTCTTCATCTTGTGCT 4329332
Score = 104 bits (114), Expect = 2e-17
Identities = 149/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| |||||| | || || || ||||||| | || || || |||
Sbjct 4329349 ATGCAAATCTTTGTGAAGACTCTTACTGGAAAGACCATCACCCTTGAGGTAGAAAGCTCT 4329408
Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| || || || | || ||||| | || | ||| || || || || ||||| ||||| |
Sbjct 4329409 GATACAATTGA-TAACGTGAAGGCGAAGATTCAG-GATAAGGAGGGCATTCCTCCTGATC 4329466
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||||| | || |||||||||||||| | || |||| |||||| ||| ||||| |
Sbjct 4329467 AGCAGCGTCTCATCTTTGCCGGCAAACAGCTCGAGGATGGTCGCACGCTGGCTGATTATA 4329526
Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201
| || || |||||||| || || ||
Sbjct 4329527 ACATCCAGAAAGAATCGACACTTCA 4329551
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | || ||||| | ||||| | ||||| ||| ||
Sbjct 4328570 ATGCAGATTTTTGTGAAGACCCTAACTGGTAAGACGATCACTCTTGAAGTTGAGAGCTCC 4328629
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| || ||| ||||||||||| ||||| || ||||
Sbjct 4328630 GACACCATAGA--CAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCGGACC 4328687
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | |||||||| || || || | || |||| ||||| | | ||||| |
Sbjct 4328688 AGCAGAGGTTAATTTTTGCTGGGAAGCAGCTTGAGGATGGCCGCACACTTGCAGATTATA 4328747
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| ||||| || || || || || ||| | ||| | | || || |||||
Sbjct 4328748 ACATTCAGAAGGAGTCTACCCTCCATCTTGTGTTGCGACTCAGGGGAGG 4328796
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/205 (70%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | ||||| || | ||||| | ||||| ||| |||
Sbjct 4328798 ATGCAGATTTTCGTGAAGACGCTTACCGGCAAGACAATCACTCTTGAAGTTGAGAGCTCT 4328857
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| || || ||||||||||| || || || ||||
Sbjct 4328858 GACACCATTGA--CAATGTCAAGGCTAAGATACAGGACAAAGAAGGCATCCCTCCGGACC 4328915
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || | |||| ||||| || || || | || |||| ||||| | | |||||||
Sbjct 4328916 AGCAAAGACTTATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTTGCGGATTACA 4328975
Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201
| ||||| || |||||||| || ||
Sbjct 4328976 ACATTCAGAAGGAATCCACCCTCCA 4329000
>seq876
Length=1913211
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| |||||||| ||||| | || || ||| | ||||| | || |||||| |||
Sbjct 665936 ATGCAGATATTTGTGAAGACACTTACGGGGAAAACTATCACCCTTGAGGTGGAGAGCTCT 665877
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| ||||| || | || |||| |||||| ||||| || || || || || |||||
Sbjct 665876 GATACTATTGA-TAACGTGAAAGCCAAAATCCAGGACAAGGAGGGCATCCCTCCAGACCA 665818
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|| ||| | || ||||| ||||| ||| | || |||| ||||| ||| || |||||
Sbjct 665817 GCAACGGCTGATCTTTGCTGGCAAGCAACTGGAGGATGGCCGCACCCTGGCAGACTACAA 665758
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||| || ||||| || || || | |||||
Sbjct 665757 TATTCAGAAGGAATCTACTCTTCACCTGGTGCT 665725
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| |||||||| ||||| | || || || ||||||| | || |||||| |||
Sbjct 666164 ATGCAGATATTTGTCAAGACCCTTACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 666105
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || ||||| |||||| ||||| || || ||||| || |||||
Sbjct 666104 GACACTATAGACAACGTGAAGGCTAAAATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 666045
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | || ||||| || ||||| | || |||| || || | | ||||| ||
Sbjct 666044 CAAAGGCTGATATTTGCTGGAAAACAGCTTGAGGATGGCCGTACCCTTGCTGATTATAAC 665985
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || ||||| || |||||| | |||||
Sbjct 665984 ATCCAGAAGGAATCTACCCTACATCTCGTGCT 665953
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || ||||||| |||| |||||| |||
Sbjct 666392 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGAGCTCT 666333
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| || ||| || || || || ||||| || || ||
Sbjct 666332 GACACCATCGACAACGTAAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCGGATCAG 666273
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || ||||||||||| ||| | || |||| || || | | ||||| |||
Sbjct 666272 CAGAGGCTGATCTTTGCCGGCAAGCAACTCGAGGATGGCCGAACCCTTGCTGATTATAAT 666213
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|||||||| || ||||| || ||
Sbjct 666212 ATTCAAAAGGAGTCCACCCTTCA 666190
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || | || || || ||||||| | || |||||| |||
Sbjct 666620 ATGCAGATCTTCGTCAAAACCCTCACAGGCAAGACCATCACCCTTGAGGTGGAGAGTTCT 666561
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| || ||||| ||||| || || ||||| || || || || || || |||
Sbjct 666560 GATACCATCGACAACGTGAAGGCTAAGATACAGGACAAGGAGGGCATCCCGCCGGATCAA 666501
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || |||||||| || || |||| |||| || || | | |||||||||
Sbjct 666500 CAGAGGCTGATCTTTGCCGGAAAGCAGCTAGAGGATGGCCGAACCCTTGCTGATTACAAT 666441
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || ||||| || ||||| | |||||
Sbjct 666440 ATCCAGAAGGAATCTACCCTACACCTTGTGCT 666409
>seq640
Length=221176
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || | || || || | ||||| |||| |||||||| ||
Sbjct 162171 ATGCAAATCTTCGTCAAAACCCTAACGGGGAAGACAATCACCCTCGAGGTGGAGTCCTCG 162112
Query 25059 GACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| | | |||| || | ||| ||||| || || |||||||| || ||
Sbjct 162111 GACACGATCGACAACGTTAAAGCGAAGATTCAG-GACAAGGAGGGCATTCCACCAGATCA 162053
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || ||||| || || || | || || | || || | | |||||||||
Sbjct 162052 GCAGCGCTTAATCTTTGCTGGGAAGCAGCTTGAGGACGGCCGTACCCTCGCCGATTACAA 161993
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
|||||| || ||||| ||||| ||
Sbjct 161992 TATTCAGAAGGAATCGACGCTTCA 161969
>seq2
Length=81761211
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| |||||||| || ||| | || | ||| | || || | || |||||| ||
Sbjct 19640682 ATGCAGATATTTGTGAAAACTCTTACTGAAAAAACTATTACCTTGGAGGTGGAGAGCTCG 19640623
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| ||| ||| ||||| ||||||||||||| |||||
Sbjct 19640622 GACACAATTGACAACATGAAGGTAAAGATCTAAGACAAGGAAGGGATTCCACAGGACCAG 19640563
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || |||| |||| || || || | || |||| |||||| | | || | |||
Sbjct 19640562 CAGAGGCTTATCTTTGTCGATAAGCAGCTTGAGGATGGTCGCACCCTTGCAGACTCTAAT 19640503
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || || || ||||| || ||
Sbjct 19640502 ATCCAGAAGGAGTCCACACTCCA 19640480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 432854890322960
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