Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq202 100 2e-16 seq876 93.3 4e-14 seq700 93.3 4e-14 seq258 89.7 4e-13 seq2 86.0 5e-12 >seq202 Length=4793652 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | |||| ||| || | ||| | ||||| || || |||||||| ||||| Sbjct 4328799 ATACCTCCCCTGAGTCGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCT 4328740 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| ||||| || || ||||| | || | | ||| ||||||||| Sbjct 4328739 GCAAGTGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGA 4328680 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| ||||| || | | || | |||||||| | || Sbjct 4328679 GGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCA 4328620 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| || || || || || || |||||||||||||| Sbjct 4328619 ACTTCAAGAGTGATCGTCTTACCAGTTAGGGTCTTCACAAAAATCTGCAT 4328570 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 114150 CAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAA 114209 || ||||| ||||| || | | ||| | || | || |||||||| || ||||| ||| Sbjct 4329581 CACATACCACCACGAAGGCGGAGAACAAGGTGAAGTGTCGATTCTTTCTGGATGTTATAA 4329522 Query 114210 TCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCC 114269 || || || ||| ||| || || ||||| || || ||||||||||||| || || Sbjct 4329521 TCAGCCAGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGATCA 4329462 Query 114270 GGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGAT 114329 ||||||||||| || || || |||||| || | | |||| || || | | | Sbjct 4329461 GGAGGAATGCCCTCCTTATCCTGAATCTTCGCCTTCACGTTATCAATTGTATCAGAGCTT 4329402 Query 114330 TCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || || | ||| | || || || || ||||| || ||||| || |||||| Sbjct 4329401 TCTACCTCAAGGGTGATGGTCTTTCCAGTAAGAGTCTTCACAAAGATTTGCATG 4329348 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || |||||||||||||| | || || ||| ||||| || || ||| Sbjct 4328994 GTGGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGCTTCCCA 4328935 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | || ||||||||||| |||||||||||||| ||||| || Sbjct 4328934 GCAAAGATAAGTCTTTGCTGGTCCGGAGGGATGCCTTCTTTGTCCTGTATCTTAGCCTTG 4328875 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | || || || | || | || |||||||| || || Sbjct 4328874 ACATTGTCAATGGTGTCAGAGCTCTCAACTTCAAGAGTGATTGTCTTGCCGGTAAGCGTC 4328815 Query 114366 TTTACAAAAATCTGCAT 114382 || || ||||||||||| Sbjct 4328814 TTCACGAAAATCTGCAT 4328798 >seq876 Length=1913211 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 |||||||| || ||||||||||| ||| | ||||||| || ||||| || ||||| Sbjct 531059 GTAGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTACGAGCGTCCTCAAGCTGCTTACCG 531000 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | | || |||||||| | || || || ||||| ||| || | || Sbjct 530999 GCGAAGATCAACCTTTGCTGGTCCGGTGAAAGTCCCTCCTTGTCCTGGATC-TTCGACTT 530941 Query 114306 AGCTGT-TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 || | || |||||||| | | || || || | ||| | || ||||| || || || Sbjct 530940 CACTATCTCGACGGTGTCAGAGCTCTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGGGT 530881 Query 114365 TTTTACAAAAATCTGCAT 114382 ||| |||||||||||||| Sbjct 530880 TTTGACAAAAATCTGCAT 530863 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || |||||||||||||| | || || ||| ||||| ||||| ||| Sbjct 665512 GTGGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGTTTTCCA 665571 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| | ||| || || || || || || |||||||| ||||||| || Sbjct 665572 GCGAAGATGAGCCTCTGCTGATCTGGCGGTATCCCCTCTTTGTCCTGAATCTTTGCCTTC 665631 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||| | || || || | || | ||||| || || || ||| Sbjct 665632 ACGTTATCAATTGTGTCTGAACTCTCCACCTCAAGAGTGATAGTTTTCCCAGTAAGTGTT 665691 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 665692 TTCACAAATATCTGCAT 665708 >seq700 Length=617226 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 || || || || || || || || || ||| | ||| || ||| || || || || || Sbjct 335065 GTCGACTCCTTCTGGATATTATAGTCAGCT-AGAGTGCGTCCATCCTCGAGCTGCTTTCC 335007 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| |||| || || || |||||||| ||||||||||| ||||| ||||| || Sbjct 335006 GGCGAAGATAAGGCGTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT 334947 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | |||| |||||||| || || || |||| ||| | ||| || || || || || Sbjct 334946 AACGTTGTCAATGGTGTCGGATGACTCCACCTCCAGGGTGATCGTCTTCCCCGTTAGGGT 334887 Query 114365 TTTTACAAAAATCTGCAT 114382 |||||| || |||||||| Sbjct 334886 TTTTACGAAGATCTGCAT 334869 >seq258 Length=1945713 Score = 89.7 bits (98), Expect = 4e-13 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACG 114223 || |||||||||||||| | || || || || |||||||||||||| ||| | || || Sbjct 1660549 AGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCTGCTAAG-GTCCG 1660491 Query 114224 AGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTC 114283 | |||||| | ||||| ||||| | || | ||| ||||| || || ||||||||||| Sbjct 1660490 ACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGTTGTTGATCAGGTGGAATGCCTTC 1660431 Query 114284 TTTGTC 114289 ||||| Sbjct 1660430 CTTGTC 1660425 >seq2 Length=81761211 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | |||| || | || || || || || |||||||| || Sbjct 19640681 ATCCCACCACGAAGGCGGAGGACTAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCC 19640740 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| || ||| |||||||| || || || |||| || | ||| ||||||||| Sbjct 19640741 GCCAGAGTGCGCCCATCCTCAAGTTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCCGGA 19640800 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| ||| | | || | |||||| | | || Sbjct 19640801 GGGATGCCCTCCTTGTCTTGGATCTTGGCTTTCACGTTATCGATGGTGTCCGAGCTCTCA 19640860 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || || || ||||| || || || |||||||| Sbjct 19640861 ACCTCCAAGGTAATGGTCTTCCCAGTAAGAGTCTTCACGAAGATCTGCAT 19640910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419675695161408