Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq202 100 2e-16
seq876 93.3 4e-14
seq700 93.3 4e-14
seq258 89.7 4e-13
seq2 86.0 5e-12
>seq202
Length=4793652
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | |||| ||| || | ||| | ||||| || || |||||||| |||||
Sbjct 4328799 ATACCTCCCCTGAGTCGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCT 4328740
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || ||| ||||| || || ||||| | || | | ||| |||||||||
Sbjct 4328739 GCAAGTGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGA 4328680
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||||||||| ||||| || | | || | |||||||| | ||
Sbjct 4328679 GGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCA 4328620
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | ||| || || || || || || ||||||||||||||
Sbjct 4328619 ACTTCAAGAGTGATCGTCTTACCAGTTAGGGTCTTCACAAAAATCTGCAT 4328570
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 114150 CAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAA 114209
|| ||||| ||||| || | | ||| | || | || |||||||| || ||||| |||
Sbjct 4329581 CACATACCACCACGAAGGCGGAGAACAAGGTGAAGTGTCGATTCTTTCTGGATGTTATAA 4329522
Query 114210 TCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCC 114269
|| || || ||| ||| || || ||||| || || ||||||||||||| || ||
Sbjct 4329521 TCAGCCAGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGATCA 4329462
Query 114270 GGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGAT 114329
||||||||||| || || || |||||| || | | |||| || || | | |
Sbjct 4329461 GGAGGAATGCCCTCCTTATCCTGAATCTTCGCCTTCACGTTATCAATTGTATCAGAGCTT 4329402
Query 114330 TCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || || | ||| | || || || || ||||| || ||||| || ||||||
Sbjct 4329401 TCTACCTCAAGGGTGATGGTCTTTCCAGTAAGAGTCTTCACAAAGATTTGCATG 4329348
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| ||||| || |||||||||||||| | || || ||| ||||| || || |||
Sbjct 4328994 GTGGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGCTTCCCA 4328935
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| || | || ||||||||||| |||||||||||||| ||||| ||
Sbjct 4328934 GCAAAGATAAGTCTTTGCTGGTCCGGAGGGATGCCTTCTTTGTCCTGTATCTTAGCCTTG 4328875
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| | | || || || | || | || |||||||| || ||
Sbjct 4328874 ACATTGTCAATGGTGTCAGAGCTCTCAACTTCAAGAGTGATTGTCTTGCCGGTAAGCGTC 4328815
Query 114366 TTTACAAAAATCTGCAT 114382
|| || |||||||||||
Sbjct 4328814 TTCACGAAAATCTGCAT 4328798
>seq876
Length=1913211
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|||||||| || ||||||||||| ||| | ||||||| || ||||| || |||||
Sbjct 531059 GTAGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTACGAGCGTCCTCAAGCTGCTTACCG 531000
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| | | || |||||||| | || || || ||||| ||| || | ||
Sbjct 530999 GCGAAGATCAACCTTTGCTGGTCCGGTGAAAGTCCCTCCTTGTCCTGGATC-TTCGACTT 530941
Query 114306 AGCTGT-TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
|| | || |||||||| | | || || || | ||| | || ||||| || || ||
Sbjct 530940 CACTATCTCGACGGTGTCAGAGCTCTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGGGT 530881
Query 114365 TTTTACAAAAATCTGCAT 114382
||| ||||||||||||||
Sbjct 530880 TTTGACAAAAATCTGCAT 530863
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| ||||| || |||||||||||||| | || || ||| ||||| ||||| |||
Sbjct 665512 GTGGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGTTTTCCA 665571
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| ||||||| | ||| || || || || || || |||||||| ||||||| ||
Sbjct 665572 GCGAAGATGAGCCTCTGCTGATCTGGCGGTATCCCCTCTTTGTCCTGAATCTTTGCCTTC 665631
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||||| | || || || | || | ||||| || || || |||
Sbjct 665632 ACGTTATCAATTGTGTCTGAACTCTCCACCTCAAGAGTGATAGTTTTCCCAGTAAGTGTT 665691
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 665692 TTCACAAATATCTGCAT 665708
>seq700
Length=617226
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244
|| || || || || || || || || ||| | ||| || ||| || || || || ||
Sbjct 335065 GTCGACTCCTTCTGGATATTATAGTCAGCT-AGAGTGCGTCCATCCTCGAGCTGCTTTCC 335007
Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304
||| |||| || || || |||||||| ||||||||||| ||||| ||||| ||
Sbjct 335006 GGCGAAGATAAGGCGTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT 334947
Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | |||| |||||||| || || || |||| ||| | ||| || || || || ||
Sbjct 334946 AACGTTGTCAATGGTGTCGGATGACTCCACCTCCAGGGTGATCGTCTTCCCCGTTAGGGT 334887
Query 114365 TTTTACAAAAATCTGCAT 114382
|||||| || ||||||||
Sbjct 334886 TTTTACGAAGATCTGCAT 334869
>seq258
Length=1945713
Score = 89.7 bits (98), Expect = 4e-13
Identities = 97/126 (77%), Gaps = 2/126 (2%)
Strand=Plus/Minus
Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACG 114223
|| |||||||||||||| | || || || || |||||||||||||| ||| | || ||
Sbjct 1660549 AGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCTGCTAAG-GTCCG 1660491
Query 114224 AGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTC 114283
| |||||| | ||||| ||||| | || | ||| ||||| || || |||||||||||
Sbjct 1660490 ACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGTTGTTGATCAGGTGGAATGCCTTC 1660431
Query 114284 TTTGTC 114289
|||||
Sbjct 1660430 CTTGTC 1660425
>seq2
Length=81761211
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | |||| || | || || || || || |||||||| ||
Sbjct 19640681 ATCCCACCACGAAGGCGGAGGACTAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCC 19640740
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| || ||| |||||||| || || || |||| || | ||| |||||||||
Sbjct 19640741 GCCAGAGTGCGCCCATCCTCAAGTTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCCGGA 19640800
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| ||||| ||| | | || | |||||| | | ||
Sbjct 19640801 GGGATGCCCTCCTTGTCTTGGATCTTGGCTTTCACGTTATCGATGGTGTCCGAGCTCTCA 19640860
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | || || || || ||||| || || || ||||||||
Sbjct 19640861 ACCTCCAAGGTAATGGTCTTCCCAGTAAGAGTCTTCACGAAGATCTGCAT 19640910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419675695161408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |