Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq293 154 3e-32
seq36 132 9e-26
>seq293
Length=413263
Score = 154 bits (170), Expect = 3e-32
Identities = 350/523 (67%), Gaps = 10/523 (2%)
Strand=Plus/Plus
Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482
||||||||||||||||| ||||| || || || |||||||| ||| | ||||||
Sbjct 226670 CTGGCCTTCTTCGCCGCTTCTGATGGTATCGTGCTGGAGAACCTCGCCGGACGCTTCATG 226729
Query 42483 AAAGAGGTGCAGTACTTT--GAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540
|||||| || |||| ||||||||| ||||| ||||||||||| ||||| || |
Sbjct 226730 CGAGAGGTTCA--ACTTCCGGAGGCGCGCGCTTTCTATGGCTTCCAGATCGCCATCGAAA 226787
Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC 42600
|| | ||||| ||| |||| || ||| | || |||||| ||| || |||
Sbjct 226788 ACATTCACTCCGAGATGTATAGTCTTCTCCTCGAGACCTACATCAAGGACTCCACCGAAA 226847
Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660
| || || ||||| || || | |||||| || ||||| | ||||
Sbjct 226848 AATCCAATCTTTTTCGCGCCATCGAAACCGTACCCTGCGTCGCCCGTAAGGCTCAGTGGG 226907
Query 42661 CGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720
| || |||||| || | || || || | ||| || | | || ||| |
Sbjct 226908 CACTGCGCTGGATTGACGCCTCTGAATCA---TTTGCTGAGCGGATTCTCGCTTTTGCGT 226964
Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGG 42780
|||||| || || |||||||| ||| |||| | ||||||||||||||||| || |
Sbjct 226965 GCGTCGAAGGTATTTTCTTCTCCGGCAGCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCG 227024
Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840
| |||||| || ||||| || || ||||| |||||| | |||||||| || ||
Sbjct 227025 GTTTGATGCCAGGTCTCACTTTTTCTAACGAGCTCATCTCTCGTGACGAGGGACTCCACT 227084
Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGG 42900
| |||||||| ||||| ||| | |||| || | ||||| ||| ||||| |||
Sbjct 227085 GCGACTTTGCTTGCCTTCTG---TATAGCCTTCTGATCAACAAGATTTCGGAGGAGAGGG 227141
Query 42901 TCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTT 42943
| |||| || | | || || || || || || ||||| ||
Sbjct 227142 TTCGGGAGATTGTTGCCGATGCTGTAGATATTGAAAAGGAATT 227184
>seq36
Length=6822877
Score = 132 bits (146), Expect = 9e-26
Identities = 345/522 (66%), Gaps = 8/522 (2%)
Strand=Plus/Minus
Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482
|| || ||||||||||| || ||||| || || |||||||| || | | ||||||
Sbjct 1784030 CTCGCTTTCTTCGCCGCTTCCGACGGAATCGTTCTAGAGAACCTCGCTGGCCGCTTCATG 1783971
Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542
||||| ||| | ||||||||| ||||| || || ||||| ||||| || |||
Sbjct 1783970 CGGGAGGTACAGCTCCCGGAGGCGCGCGCTTTCTATGGATTTCAGATCGCCATCGAAAAC 1783911
Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602
| ||||| ||| ||||| | || ||| | || |||||| || ||| |||
Sbjct 1783910 ATCCACTCCGAGATGTACAGCCTGCTTCTCGAAACCTACATCAAAGACTCCGCAGAGAA- 1783852
Query 42603 AACGGGC-TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661
| || | | ||| | || || ||||| | |||||| || ||||| | |||||
Sbjct 1783851 ATCGCACCTCTTCCATGCTATCGAGACCGTTCCCTGCGTCGCCCGCAAGGCACAGTGGGC 1783792
Query 42662 GCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721
||| ||||||||| |||| | || | ||| | | | || ||| |
Sbjct 1783791 TCTCCGCTGGATCGACGCCTCCGATTCT---TTTGCAGAGCGAATTCTTGCATTTGCTTG 1783735
Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGT 42781
||| ||||||||||||||||| || ||| | ||||||||||||| ||| ||| |
Sbjct 1783734 CGTTGAGGGCATCTTCTTCTCTGGTAGTTTCTGCGCCATCTTCTGGCTGAAGAAGAGAGG 1783675
Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841
| ||||| || ||||| || || ||||| || || | || ||||| ||||| |
Sbjct 1783674 GCTAATGCCTGGTCTCACTTTTTCCAACGAGCTTATTTCTCGTGATGAGGGCCTGCACTG 1783615
Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGT 42901
|||||||| || || |||| | || | |||| | |||| ||| |||| ||||
Sbjct 1783614 TGACTTTGCGTGTCTGCTGTAC---AGTCTGCTCAATAATAAGCTCTCTGAGGATAGGGT 1783558
Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTT 42943
| | || | | || || || || || |||| ||||||
Sbjct 1783557 TAGAGAGATTGTTGCTGATGCTGTAGATATAGAGAGGGAGTT 1783516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943281728963840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |