Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq876 87.8 1e-12
seq2 82.4 6e-11
>seq876
Length=1913211
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/227 (69%), Gaps = 18/227 (8%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| || |||||||| ||||| || ||||||||||| ||||| ||||||| ||
Sbjct 665719 AGGCGGAGCACCAGGTGAAGAGTAGATTCCTTCTGAATATTGTAGTCTGCCAGGGTGCGG 665778
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
| || |||| ||||||||| ||||| ||||| || ||||| || || | || |||
Sbjct 665779 CCATCCTCCAGTTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCTGGAGGGATGCCCTCC 665838
Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTC---GCATTCGACC 34086
|||||| | |||| |||| |||| ||||| ||| || || || |||
Sbjct 665839 TTGTCC-TGGATTTTGGCTT--------TCACGTTATCAATAGTATCAGAGCTCTCCACC 665889
Query 34087 ------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| || ||||| || || ||||| |||||||| || |||||
Sbjct 665890 TCAAGGGTGATAGTTTTCCCCGTAAGTGTCTTCACAAATATCTGCAT 665936
>seq2
Length=81761211
Score = 82.4 bits (90), Expect = 6e-11
Identities = 106/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
||||| ||||| || || || || || || ||| ||||||||| |||||||| |||||
Sbjct 19640912 CCTCCCCTCAGACGTAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGC- 19640970
Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
|| || || | || |||| ||||||||||| || |||| | |||||||| ||
Sbjct 19640971 AAGGGTACGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAACCTTTGCTGATCGGGAGG 19641030
Query 34020 CACGCTCTCTTTGTCCATAATTTT 34043
| || |||||| ||| ||||||
Sbjct 19641031 GATGCCCTCTTTATCCTGAATTTT 19641054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396628885286368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |