Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq293 136 9e-27
seq36 131 4e-25
>seq293
Length=413263
Score = 136 bits (150), Expect = 9e-27
Identities = 305/457 (67%), Gaps = 6/457 (1%)
Strand=Plus/Plus
Query 243284 AATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGA 243343
|||||||||||||||| | |||| | | |||||| ||||||||| | || ||||| |
Sbjct 226932 AATCATTTGCTGAGCGGATTCTCGCTTTTGCGTGCGTCGAAGGTATTTTCTTCTCCGGCA 226991
Query 243344 GTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 243403
| |||||||||||||| ||||| ||| ||| ||||||| || ||| | | ||||
Sbjct 226992 GCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCTCACTTTTTCTA 227051
Query 243404 ACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAA 243463
||||| ||||| ||| |||||||| || ||| | || | | ||| ||||| |
Sbjct 227052 ACGAGCTCATCTCTCGTGACGAGGGACTCCACTGCGACTTTGCTTGCCTTCTGTAT---A 227108
Query 243464 AGCTCCAG---AACAAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTG 243520
|| | | |||||| | | || | ||| | || | | || || || |
Sbjct 227109 GCCTTCTGATCAACAAGATTTCGGAGGAGAGGGTTCGGGAGATTGTTGCCGATGCTGTAG 227168
Query 243521 AAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTG 243580
| | ||||||||||| |||| || || | || ||| ||| | || |||||| | |
Sbjct 227169 ATATTGAAAAGGAATTTGTTTGTGATGCACTCCCCTGCGCTCTTGTGGGGATGAACGCAG 227228
Query 243581 AACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATG 243640
| || ||| | | || || |||||||| || || || || | || || || ||||
Sbjct 227229 ATCTAATGAGCCGCTATATTGAATTCGTGGCAGATCGGCTTGTTGGAGCTCTGGGCTATG 227288
Query 243641 AGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGA 243700
| || |||| ||| || |||| | ||||| ||||| ||||| || || |
Sbjct 227289 ACAAGATGTATGGTGTATCGAATCCATTTGATTGGATGGAACTCATCTCGCTGCAGGGTA 227348
Query 243701 AAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737
| ||||| ||||| || ||| | || | || |||||
Sbjct 227349 AGACTAATTTCTTTGAGAAGAGGGTTGGGGAGTATCA 227385
>seq36
Length=6822877
Score = 131 bits (144), Expect = 4e-25
Identities = 286/425 (67%), Gaps = 15/425 (4%)
Strand=Plus/Minus
Query 243316 TGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAA 243375
|||||||| || || | || || || ||||||||||||||||| |||||| ||| | |
Sbjct 1783736 TGCGTTGAGGGCATCTTCTTCTCTGGTAGTTTCTGCGCCATCTTCTGGCTGAAGAAGAGA 1783677
Query 243376 GGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCAC 243435
|| | |||||||| ||| | | || |||||| | || ||| || |||||||| |||
Sbjct 1783676 GGGCTAATGCCTGGTCTCACTTTTTCCAACGAGCTTATTTCTCGTGATGAGGGCCTGCAC 1783617
Query 243436 CAACAGTTCG-GTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAACGGT 243494
| || | ||| || |||| |||| | || ||||| | || | |||
Sbjct 1783616 TGTGACTTTGCGTGT-CTGCTGTACAGTCTGCTCAATAATAAGCTCTCTGAGGATAGGGT 1783558
Query 243495 CAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCC 243554
| | | || | | || || || || | || | ||| || |||| |||||| ||
Sbjct 1783557 TAGAGAGATTGTTGCTGATGCTGTAGATATAGAGAGGGAGTTTGTTTGTGACGCTCCTC- 1783499
Query 243555 ATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGA 243614
|| | || |||||| |||| || ||| | |||||||| || || || |||||
Sbjct 1783498 --------TTGTGGGGATGAACGCTGATCTAATGAGTCAGTACATAGAGTTTGTTGCCGA 1783447
Query 243615 CCGCATTTTCATCGCGCTT--GGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCC 243672
|| | ||| | | |||| ||||| | || ||||| | ||| || |||| |
Sbjct 1783446 TCG--TCTTCTTGGTGCTTTAGGTTACGGTAAGATGTACGAGGTATCGAATCCATTTGAC 1783389
Query 243673 TTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGAT 243732
| |||||||| ||||| ||||||||||| || ||||||||||| || | ||| ||||
Sbjct 1783388 TGGATGGAGCTTATTTCTCTTCAAGGGAAGACAAACTTCTTCGAGAAAAGGGTCGGTGAA 1783329
Query 243733 TATCA 243737
|| ||
Sbjct 1783328 TACCA 1783324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1101614119850400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |