Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq293 105 8e-18
seq2 102 1e-16
seq36 98.7 1e-15
>seq293
Length=413263
Score = 105 bits (116), Expect = 8e-18
Identities = 189/273 (69%), Gaps = 5/273 (2%)
Strand=Plus/Minus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || |||||| ||||||||||| |||||||| || || || || || |||
Sbjct 227094 GCAAAGTCGCAGTGGAGTCCCTCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAGACCT 227035
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||| | ||| |||||||| | |||||| || || || || || |||||||| ||
Sbjct 227034 GGCATCAAACCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGCCGGAGAAGAAAATA 226975
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAAC 126226
|| || || ||||| || || | | ||||||||||| || || | ||||| |
Sbjct 226974 CCTTCGACGCACGCAAAAGCGAGAATCCGCTCAGCAAATGATTCAGA---GGCGTCAATC 226918
Query 126227 CACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG 126286
|| || |||||||| ||||| ||| || || ||||| | ||| || |||
Sbjct 226917 CAGCGCAGTGCCCACTGAGCCTTACGGGCGACGCAGGGTACGGTTTCGATGGCGCGAAAA 226858
Query 126287 AGTTCCTTCTTTTCTGATGGA-TCTTTGATGTA 126318
|| | ||||| | |||| || ||||||||
Sbjct 226857 AGATTGGATTTTTC-GGTGGAGTCCTTGATGTA 226826
>seq2
Length=81761211
Score = 102 bits (112), Expect = 1e-16
Identities = 226/334 (68%), Gaps = 4/334 (1%)
Strand=Plus/Plus
Query 10820 TCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAG 10879
|| ||||| || |||||| || || || | || | ||| || || | |||||
Sbjct 31018738 TCCAGGATGTCTGCGCGGTTAGTAGCTGCAAGAACTATGATACCTGTATTTCCTTCAAAA 31018797
Query 10880 CCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATA 10939
|||||||| |||||||| || || || | |||||||| | |||||||||| | |
Sbjct 31018798 CCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCATTCCCCCCTCCA 31018857
Query 10940 CCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGT 10999
||||| | |||||| | || || || ||||||||||| | ||| || ||||| |||
Sbjct 31018858 ATACCCGTTCCTCGTTGCCTTCCAACAGCATCAATTTCATCAACGAATACAATACAAGGT 31018917
Query 11000 TGATTTTC-ACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAA 11058
||| || | | ||| ||| | ||| || || | ||| || ||||| |||||
Sbjct 31018918 GCATTCTCTTTAGCCTTCTTGAAA-AGATCACGAACCCGTGAGGCGCCAACACCAACAAA 31018976
Query 11059 CATTTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGA 11117
||| |||||||| | | | | | || | || ||||| || | |||||| || |
Sbjct 31018977 CATCTCCACAAACTCAGATCCTG-AGATAGAGAAAAAGGGAACACCAGCTTCACCAGCAA 31019035
Query 11118 TGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGG 11151
|||| ||| || || ||||| || || |||||
Sbjct 31019036 TGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGG 31019069
>seq36
Length=6822877
Score = 98.7 bits (108), Expect = 1e-15
Identities = 339/522 (65%), Gaps = 14/522 (3%)
Strand=Plus/Plus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| || ||||| ||||| || || || || || || || || ||
Sbjct 1783606 GCAAAGTCACAGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTGGAAAAAGTGAGACCA 1783665
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||| || || | |||||||| |||||| || || || || ||| |||||||||||
Sbjct 1783666 GGCATTAGCCCTCTCTTCTTCAGCCAGAAGATGGCGCAGAAACTACCAGAGAAGAAGATG 1783725
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAAC 126226
||||| || || || || |||| | ||||| ||||| || || | ||| | |
Sbjct 1783726 CCCTCAACGCAAGCAAATGCAAGAATTCGCTCTGCAAAAGAATCGGA---GGCGTCGATC 1783782
Query 126227 CACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG 126286
|| | |||||||| ||||| ||| || || ||||||| ||| || | |||
Sbjct 1783783 CAGCGGAGAGCCCACTGTGCCTTGCGGGCGACGCAGGGAACGGTCTCGATAGCATGGAAG 1783842
Query 126287 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 126346
|| | | || |||| | ||||||||||| | || | || || | |||
Sbjct 1783843 AGGTGCGATTTCTCTGCGGAGTCTTTGATGTAGGTTTCGAGAAGCAGGCTGTACATCTCG 1783902
Query 126347 CCGTGGACCATTTCATTATGGC--ACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 126404
||||| |||| ||||| |||| | | ||||||| |||||| || | ||
Sbjct 1783903 GAGTGGATGTTTTC--GATGGCGATCTGAAATCCATAGAAAGCGCGCGCCTCCGGGAGCT 1783960
Query 126405 GTACCTCATCGGCA--AAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 126462
||||||| | ||| || | | || ||||| | ||| ||||| ||||| | ||
Sbjct 1783961 GTACCTC--CCGCATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCCGTCGGAAGCGGC 1784018
Query 126463 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGG--TC-TTCCA 126519
|| || || || | | ||| ||| | | |||| | | | |||| || |||||
Sbjct 1784019 GAAGAAAGCGAGAACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAGGGATTCATTCCA 1784078
Query 126520 GTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|| | ||||| | || ||||| || || || || |||||
Sbjct 1784079 GTGGCGGAGATCTTGGGACAGATCAACTTCTTCTGCTGTCCA 1784120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596684683438720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |