Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq640 131 2e-25
seq876 100 3e-16
seq202 86.0 7e-12
seq2 84.2 2e-11
>seq640
Length=221176
Score = 131 bits (144), Expect = 2e-25
Identities = 152/201 (76%), Gaps = 3/201 (1%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| |||||||||||||| || || || || |||| || |||||||| ||||| ||
Sbjct 161981 TCCTTCTGAATATTGTAATCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTCCCAGCAAAG 162040
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | |||||||| || | ||| | || |||||||||| ||| | || | || | |||
Sbjct 162041 ATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCC-TGAATCTTCGCTTTAACGTT 162099
Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | |||||| || ||||| |||| ||||| || || |||||||| || || ||
Sbjct 162100 GTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTGAC 162159
Query 42197 AAAGATTTGCAT-TTTCACGC 42216
||||||||||| ||||| ||
Sbjct 162160 GAAGATTTGCATCTTTCAGGC 162180
>seq876
Length=1913211
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 7/217 (3%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| ||||||||||| || ||||| || || | || || || ||||| ||||| ||
Sbjct 665746 TCCTTCTGAATATTGTAGTCTGCCAGGGTGCGGCCATCCTCCAGTTGCTTGCCAGCAAAG 665805
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| || || |||||||| | || | || |||||||||| |||||| ||| | |
Sbjct 665806 ATCAGCCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCTTTCACGTTA 665865
Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194
| | || || |||| ||||| || | ||||| ||||| ||||| || |||||
Sbjct 665866 TCAATAGTATCAGAGCTC---TCCACCTCAAGGGTGATAGTTTTCCCCGTAAGTGTCTTC 665922
Query 42195 ACAAAGATTTGCATTTTCACGCCGAATACAATGCACG 42231
||||| || |||| | ||| || || || | |||||
Sbjct 665923 ACAAATATCTGCA-TACCACCCCTAAGACGAAGCACG 665958
Score = 87.8 bits (96), Expect = 2e-12
Identities = 137/195 (70%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| ||||| ||||| || || || || || |||| || ||||||||||| |||||
Sbjct 531053 TCCTTCTGAATGTTGTAGTCGGCAAGGGTACGAGCGTCCTCAAGCTGCTTACCGGCGAAG 530994
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | | |||||||| | || | | |||||||||| ||| || || | ||
Sbjct 530993 ATCAACCTTTGCTGGTCCGGTGAAAGTCCCTCCTTGTCCTGGATCTTCGACTTCACTATC 530934
Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194
| || ||||| |||| ||||| |||| || || || ||||| || || || ||
Sbjct 530933 TCGACGGTGTCAGAGCTC---TCCACCTCGAGGGTAATAGTCTTGCCAGTGAGGGTTTTG 530877
Query 42195 ACAAAGATTTGCATT 42209
||||| || ||||||
Sbjct 530876 ACAAAAATCTGCATT 530862
Score = 86.0 bits (94), Expect = 7e-12
Identities = 139/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||||||||||||||| |||||||| || || || | || || || ||||| || || ||
Sbjct 666201 CTCCTTTTGAATATTATAATCAGCAAGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCAAA 666260
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || | |||||| || | || | || |||||| || ||| || || | |||
Sbjct 666261 GATCAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGGATCTTAGCCTTTA-CGT 666319
Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | ||||| |||| ||||| |||| |||||||| ||||| || || ||||
Sbjct 666320 TGTCGATGGTGTCAGAGCTC---TCCACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCT 666376
Query 42193 TTACAAAGATTTGCAT 42208
| || || || |||||
Sbjct 666377 TGACGAAAATCTGCAT 666392
>seq202
Length=4793652
Score = 86.0 bits (94), Expect = 7e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| ||||||||||| || || || || || | || || |||||||||||||| ||
Sbjct 4329311 TCCTTCTGAATATTGTAGTCCGCAAGGGTGCGACCATCCTCAAGCTGCTTACCAGCAAAA 4329252
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124
||||| ||||||||||| | ||| | | |||||| || ||||||
Sbjct 4329251 ATGAGGCGCTGCTGGTCCGGTGGAATCCCCTCCTTATCTTGGATTTT 4329205
>seq2
Length=81761211
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||||||||| || || || | || || |||||||| ||||| ||
Sbjct 19641175 CTCCTTCTGTATGTTGTAATCAGCAAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAA 19641234
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| |||| ||| || || | || | || ||||| ||| ||| ||| || | |||
Sbjct 19641235 GATCAGTCTCTGTTGATCTGGAGGAATGCCTTCCTTATCCTGGATCTTTGCATTCA-CGT 19641293
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | ||||| |||||| || | ||||| || ||||| || || | ||| |
Sbjct 19641294 TGTCGATGGTGTCAGAACTTTCCACCTCAAGGGTGATAGTCTTGCCGGTAAGAGACTTAA 19641353
Query 42196 CAAAGATTTGCAT 42208
||||||||| |||
Sbjct 19641354 CAAAGATTTTCAT 19641366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542604510306560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |