Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq202 122 9e-23
seq876 109 5e-19
seq640 107 2e-18
seq2 95.1 1e-14
>seq202
Length=4793652
Score = 122 bits (134), Expect = 9e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| || |||||||||||||| || | |||||| | || ||||||||||| ||
Sbjct 4328994 GTGGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGCTTCCCA 4328935
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || || | |||||||| ||||| || |||||||| || ||||| || |||
Sbjct 4328934 GCAAAGATAAGTCTTTGCTGGTCCGGAGGGATGCCTTCTTTGTCCTGTATCTTAGCCTTG 4328875
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || ||| | || ||||| | ||| | ||||||||||| | ||
Sbjct 4328874 ACATTGTCAATGGTGTCAGAGCTCTCAACTTCAAGAGTGATTGTCTTGCCGGTAAGCGTC 4328815
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||||||| |||||
Sbjct 4328814 TTCACGAAAATCTGCAT 4328798
Score = 116 bits (128), Expect = 4e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||||| || ||||| || ||||| ||||| || || | |||||| | ||
Sbjct 4329332 AGCACAAGATGAAGAGTAGATTCCTTCTGAATATTGTAGTCCGCAAGGGTGCGACCATCC 4329273
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| || ||| ||||||| ||||||||||| || ||||| || || || |||
Sbjct 4329272 TCAAGCTGCTTACCAGCAAAAATGAGGCGCTGCTGGTCCGGTGGAATCCCCTCCTTATCT 4329213
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| ||||| ||| ||| || | || || | || ||||| | || | |||
Sbjct 4329212 TGGATTTTAGCCTTAACATTGTCAATAGTGTCGGAGCTCTCAACTTCAAGTGTGATTGTC 4329153
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || || | ||||| || || || |||||
Sbjct 4329152 TTTCCAGTGAGGGTTTTCACAAATATCTGCAT 4329121
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| ||||||||||| || ||||| ||||| || | ||||| | ||
Sbjct 4329560 AGAACAAGGTGAAGTGTCGATTCTTTCTGGATGTTATAATCAGCCAGCGTGCGACCATCC 4329501
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||| ||||||||| | ||||| |||||||| || |||||||| || || || ||
Sbjct 4329500 TCGAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGATCAGGAGGAATGCCCTCCTTATCC 4329441
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | ||||||| | || || || | || | ||||
Sbjct 4329440 TGAATCTTCGCCTTCACGTTATCAATTGTATCAGAGCTTTCTACCTCAAGGGTGATGGTC 4329381
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || || | ||| || || || ||||||||
Sbjct 4329380 TTTCCAGTAAGAGTCTTCACAAAGATTTGCAT 4329349
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293
||| ||||| | || || || || |||||||| |||||||| | ||||| | || ||
Sbjct 4328779 CACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCTGCAAGTGTGCGGCCATCCTC 4328720
Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353
||||||||| || ||| |||| | || ||||||||| |||||||| |||||||| || ||
Sbjct 4328719 AAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGAGGAATGCCTTCTTTGTCCTG 4328660
Query 64354 TATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413
|| || ||| ||| || | || || | || ||||| | ||| | |||||
Sbjct 4328659 GATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCAACTTCAAGAGTGATCGTCTT 4328600
Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || | || || || ||||| |||||
Sbjct 4328599 ACCAGTTAGGGTCTTCACAAAAATCTGCAT 4328570
Score = 91.5 bits (100), Expect = 1e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || || || || |||||||| || ||||||| ||||| ||||
Sbjct 4328553 AGCACAAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCTGCGAGTGTGCGGCCGTCC 4328494
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| || ||| | || | || ||| ||||| ||||| || ||||| || |||
Sbjct 4328493 TCAAGCTGCTTCCCAGCAAAGATCAACCTCTGTTGGTCCGGAGGGATGCCTTCCTTGTCT 4328434
Query 64352 TGTATTTT 64359
|| || ||
Sbjct 4328433 TGGATCTT 4328426
>seq876
Length=1913211
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || ||||| || ||||||||||| || || | ||| || |||||
Sbjct 531074 AGAACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTACGAGCGTCC 531015
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| ||||| | || | || |||||||| || | || ||| || || ||
Sbjct 531014 TCAAGCTGCTTACCGGCGAAGATCAACCTTTGCTGGTCCGGTGAAAGTCCCTCCTTGTCC 530955
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || | ||| || || ||| | ||||| || | || | |||
Sbjct 530954 TGGATCTTCGACTTCACTATCTCGACGGTGTCAGAGCTCTCCACCTCGAGGGTAATAGTC 530895
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||||| || | ||||| || ||||| ||||||
Sbjct 530894 TTGCCAGTGAGGGTTTTGACAAAAATCTGCATT 530862
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || |||||||| || ||||| || | ||| || | ||
Sbjct 666181 AGAACAAGGTGAAGGGTGGACTCCTTTTGAATATTATAATCAGCAAGGGTTCGGCCATCC 666240
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| || |||||||||||| | || |||| |||||| || || ||||| || || || |||
Sbjct 666241 TCGAGTTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTATCT 666300
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || |||||| || | || ||| | ||||| || | || | ||||
Sbjct 666301 TGGATCTTAGCCTTTACGTTGTCGATGGTGTCAGAGCTCTCCACCTCGAGGGTGATGGTC 666360
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | || || |||||||| |||||
Sbjct 666361 TTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 666392
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || ||||| ||||| |||||||| || | || ||| || | ||
Sbjct 530846 AGAACGAGATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGGGTTCGACCATCC 530787
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| ||||| | || | || ||||||||| || || || || || || |||
Sbjct 530786 TCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCT 530727
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| ||||| || ||| || | || ||| | ||||| || | || | ||||
Sbjct 530726 TGAATTTTGGATTTGACATTTTCGATCGTGTCAGAGCTCTCCACCTCAAGCGTGATGGTC 530667
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| | || || || || || |||||
Sbjct 530666 TTGCCGGTGAGGGTCTTCACAAATATCTGCAT 530635
Score = 93.3 bits (102), Expect = 4e-14
Identities = 155/223 (70%), Gaps = 1/223 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || || ||||| || |||||||| || | || || || ||||
Sbjct 530163 AAGAACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCGGAGAGCGTTCGGCCGTC 530104
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||||| ||||| || | || |||| |||||| || || || |||||||| || ||
Sbjct 530103 CTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGATCCGGTGGGATTCCTTCCTTATC 530044
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| ||||| ||| || || | ||||| | ||||| || | |||| ||
Sbjct 530043 CTGGATTTTAGACTTAACGTTTTCAATCGTATCGGAGCTCTCCACGTCAAGGGTTATTGT 529984
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT-TTTAATAAT 64452
||||||||| | || || || || || ||||| | ||| |||
Sbjct 529983 CTTGCCGGTGAGGGTCTTGACAAATATCTGCATCTGTAACAAT 529941
Score = 86.0 bits (94), Expect = 6e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| || |||||||||||||| || | |||||| | || |||||||| || ||
Sbjct 665512 GTGGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGTTTTCCA 665571
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||||| |||||| || || || || || ||||| || || || ||| |||
Sbjct 665572 GCGAAGATGAGCCTCTGCTGATCTGGCGGTATCCCCTCTTTGTCCTGAATCTTTGCCTTC 665631
Query 64367 AC 64368
||
Sbjct 665632 AC 665633
>seq640
Length=221176
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| ||||||||| || ||||| |||||||| |||| ||| || ||||
Sbjct 161960 AGAACGAGGTGAAGCGTCGATTCCTTCTGAATATTGTAATCGGCGAGGGTACGGCCGTCC 162019
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| || ||| | || | |||||||| || || ||||| || || || ||
Sbjct 162020 TCAAGCTGCTTCCCAGCAAAGATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCC 162079
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| || || | || || || ||||| || | || | ||
Sbjct 162080 TG-AATCTTCGCTTTAACGTTGTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGT 162138
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||| || || | ||||| ||||| |||||||| ||
Sbjct 162139 CTTCCCCGTTAGGGTTTTGACGAAGATTTGCATCTT 162174
>seq2
Length=81761211
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || ||||||||||| || || | |||||| | || ||||||||||||||
Sbjct 19641495 GTTGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCA 19641554
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| |||| | || ||||| || || || || || || || || || ||||| |||
Sbjct 19641555 GCAAAAATCAACCTTTGCTGATCCGGTGGGATACCCTCCTTGTCCTGGATTTTGGCCTTA 19641614
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | |||||| | ||||| || | || | |||||||| || | |||
Sbjct 19641615 ACGTTGTCGATGGTATCAGAGCTTTCCACCTCGAGGGTGATCGTCTTGCCAGTAAGAGTC 19641674
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| ||||| || ||||| ||
Sbjct 19641675 TTCACGAAGATCTGCATCTT 19641694
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| ||||| | ||| || | || || ||||||||||||
Sbjct 19640942 GTGGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTACGACCATCCTCCAGCTGCTTGCCG 19641001
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || | || ||||| |||||||| || || ||||| || || ||||| |||
Sbjct 19641002 GCGAAGATCAACCTTTGCTGATCGGGAGGGATGCCCTCTTTATCCTGAATTTTGGCCTTC 19641061
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| | || | || || | || || |||| || | ||||| ||||| | |||
Sbjct 19641062 ACGTCGTCGATGGTGTCTGAGCTTTCAACCTCTAGGGTGATAGTCTTACCGGTGAGAGTC 19641121
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 19641122 TTCACGAAGATCTGCAT 19641138
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || || || || || ||||||||||| || | |||||| | ||
Sbjct 19641155 AGGACAAGATGGAGAGTGGACTCCTTCTGTATGTTGTAATCAGCAAGGGTGCGACCATCC 19641214
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || || | ||| || || |||||||| ||||| || ||
Sbjct 19641215 TCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAGGAATGCCTTCCTTATCC 19641274
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || ||| || || || | || ||| ||||| || | || | |||
Sbjct 19641275 TGGATCTTTGCATTCACGTTGTCGATGGTGTCAGAACTTTCCACCTCAAGGGTGATAGTC 19641334
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| | || || || || |||| |||
Sbjct 19641335 TTGCCGGTAAGAGACTTAACAAAGATTTTCAT 19641366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499085297752960
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