Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq700 100 3e-16 seq876 98.7 1e-15 seq2 98.7 1e-15 seq202 95.1 1e-14 seq640 82.4 8e-11 >seq700 Length=617226 Score = 100 bits (110), Expect = 3e-16 Identities = 144/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 |||||||| || || || ||||| ||| | ||| || |||||||| || || |||| Sbjct 335062 GACTCCTTCTGGATATTATAGTCAGCT-AGAGTGCGTCCATCCTCGAGCTGCTTTCCGGC 335004 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 |||| || || || |||||||| || || ||||| ||||| ||| || | |||| Sbjct 335003 GAAGATAAGGCGTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTG-GCCTTAA 334945 Query 138540 --TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| | | |||||||| ||||||||||| | || | ||| || || || || ||| Sbjct 334944 CGTTGT-CAATGGTGTCGGATGACTCCACCTCCAGGGTGATCGTCTTCCCCGTTAGGGTT 334886 Query 138598 TTTACAAAAATCTGCAT 138614 ||||| || |||||||| Sbjct 334885 TTTACGAAGATCTGCAT 334869 >seq876 Length=1913211 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| | ||| | || | | | || ||||| || | |||||||||| Sbjct 530405 CCTCCTCTGAGACGGAGAACGAGGTGAAGGGTGGATTCCTTCTGGACGTTGTAGTCGGAA 530346 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| ||||| || |||| | |||| || | ||| ||||||||||| Sbjct 530345 AGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGG 530286 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCAC 138566 || || |||||||| || |||| || |||| | || | |||||| | |||||| Sbjct 530285 ATCCCCTCTTTGTC-CTGGATTTTGGTCTTAACGATCTCGATGGTGTCCGAACTCTCCAC 530227 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || ||||| ||||| || || || |||||||| Sbjct 530226 CTCAAGGGTTATTGTCTTCCCAGTTAGAGTCTTGACGAAGATCTGCAT 530179 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || |||||||||||| | || || ||||||||| ||||| |||| Sbjct 530600 GACTCTTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCG 530541 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || | | ||| |||||||| || || || |||||||| ||||||| || | Sbjct 530540 AAAATCAACCTCTGCTGGTCCGGTGGGATGCCCTCTTTGTCCTGGATTTTTGACTTAACG 530481 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 ||| | |||||||| |||||| |||| || | || || ||||| || ||||| Sbjct 530480 ATTTCGATGGTGTCGGAACTCTCCACGTCGAGAGTAATGGTCTTGCCAGTGAGGGTTTTG 530421 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 530420 ACAAAGATCTGCAT 530407 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||||||| | ||||| | |||||| || || ||||||| Sbjct 531056 GATTCCTTCTGAATGTTGTAGTCGGCAAGGGTACGAGCGTCCTCAAGCTGCTTACCGGCG 530997 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | | || |||||||| | | || || ||||| ||| || || | | Sbjct 530996 AAGATCAACCTTTGCTGGTCCGGTGAAAGTCCCTCCTTGTCCTGGATCTTCGACTTCACT 530937 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || |||||||| | ||||||||||| || | || || ||||| || ||||| Sbjct 530936 ATCTCGACGGTGTCAGAGCTCTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGGGTTTTG 530877 Query 138601 ACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 530876 ACAAAAATCTGCAT 530863 >seq2 Length=81761211 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || ||| ||| ||||| ||||| || |||| | Sbjct 19640717 GACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGCCCATCCTCAAGTTGCTTTCCGGCA 19640776 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||||||||| || || || ||||| ||| || ||| | Sbjct 19640777 AAGATAAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCTTTCACG 19640836 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| ||||| | || | || || ||||| ||||| || Sbjct 19640837 TTATCGATGGTGTCCGAGCTCTCAACCTCCAAGGTAATGGTCTTCCCAGTAAGAGTCTTC 19640896 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 19640897 ACGAAGATCTGCAT 19640910 >seq202 Length=4793652 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 ||||| || | ||| | | | |||||||| |||||||| || || | || || Sbjct 4328784 CGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCTGCAAGTGTGCGGCCA 4328725 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| || || || || | | | |||| | ||| ||||||||||| || ||||||||| Sbjct 4328724 TCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGAGGAATGCCTTCTTTG 4328665 Query 138520 TCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 || ||| || || | ||||| | | |||||||| ||| || || | || | Sbjct 4328664 TCCTGGATCTTGGCCTTGACATTGT-CTATGGTGTCGGAGCTCTCAACTTCAAGAGTGAT 4328606 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| |||||||| || || || |||||||||||||| Sbjct 4328605 CGTCTTACCAGTTAGGGTCTTCACAAAAATCTGCAT 4328570 >seq640 Length=221176 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||| ||||| ||| | ||||| |||||| || || || || | | Sbjct 161978 GATTCCTTCTGAATATTGTAATCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTCCCAGCA 162037 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||||| ||||| || || || || || || || ||||| ||| | || | ||||| Sbjct 162038 AAGATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCC-TGAATCTTCGCTTTAAC 162096 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| | | ||||| | ||||||||||||| || | || || || || || |||| Sbjct 162097 GTTGT-CGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTT 162155 Query 138599 TTACAAAAATCTGCAT 138614 | || || || ||||| Sbjct 162156 TGACGAAGATTTGCAT 162171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495706685364480