Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq876 96.9 2e-15 seq258 93.3 3e-14 >seq876 Length=1913211 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || |||||||| ||||| || |||||||| ||| ||| ||| |||| || | ||| Sbjct 530153 TGGAGGGTAGACTCTTTCTGGATGTTGTAGTCGGAGAGCGTTCGGCCGTCCTCAAGCTGT 530094 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||||||| | |||| | ||| || || ||| ||||||||||| || ||||| Sbjct 530093 TTGCCAGCGAAGATCAGCCTCTGCTGATCCGGTGGGATTCCTTCCTTATCCTGGATTTTA 530034 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || |||| || |||||| | || ||||| | ||| || || || || || Sbjct 530033 GACTTAACGTTTTCAATCGTATCGGAGCTCTCCACGTCAAGGGTTATTGTCTTGCCGGTG 529974 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || ||||| Sbjct 529973 AGGGTCTTGACAAATATCTGCAT 529951 >seq258 Length=1945713 Score = 93.3 bits (102), Expect = 3e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||||| | || ||||||||||| || || || || || || ||||||||||| ||| Sbjct 1660558 CCACCTCTAAGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCTGCT 1660499 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | | | |||||||| ||||| ||||| | |||||||| ||||| || ||| Sbjct 1660498 AAGG-TCCGACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGTTGTTGATCAGGTGG 1660440 Query 15069 AATTCCTTCCTTGTC 15083 ||| ||||||||||| Sbjct 1660439 AATGCCTTCCTTGTC 1660425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357001797627440