Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq876 114 1e-20 seq202 111 1e-19 seq700 102 7e-17 >seq876 Length=1913211 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | ||| | | || ||||| || || |||||||||||||| || || || Sbjct 530864 ATTCCCCCTCTGAGGCGGAGAACGAGATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCA 530805 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || |||| | ||| || | || ||||| ||| | ||||| | ||||||||||| Sbjct 530804 GAGAGGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGG 530745 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || ||||| || || ||||||||||| ||||| ||| | ||||| || ||| Sbjct 530744 GGGATGCCCTCCTTGTCTTGAATTTTGGATTTGACATTTTCGATCGTGTCAGAGCTCTCC 530685 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || | || |||||||| || || || ||||| || |||||| Sbjct 530684 ACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCATC 530634 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || || || ||||| || || ||| || |||| || || Sbjct 530615 ACAAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 530556 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | |||||||| ||| | ||||| | ||||||||||| || ||||| ||||| || || Sbjct 530555 AGCTGTTTTCCGGCGAAAATCAACCTCTGCTGGTCCGGTGGGATGCCCTCTTTGTCCTGG 530496 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 |||||| || | ||| | |||||||||| ||| || |||||||||| || ||| Sbjct 530495 ATTTTTGACTTAACGATTTCGATGGTGTCGGAACTCTCCACGTCGAGAGTAATGGTCTTG 530436 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||| ||||| || ||||| Sbjct 530435 CCAGTGAGGGTTTTGACAAAGATCTGCAT 530407 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| ||||| || || |||||||| ||||| |||||||| | ||| ||| || Sbjct 665955 CACGAGATGTAGGGTAGATTCCTTCTGGATGTTATAATCAGCAAGGGTACGGCCATCCTC 666014 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | |||||||| || |||||| | |||||||||||| |||||||| || || || || Sbjct 666015 AAGCTGTTTTCCAGCAAATATCAGCCTTTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 666074 Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 ||||| || | || | |||| ||||| || ||| || || || || | || | Sbjct 666075 GATTTTAGCCTTCA-CGTTGTCTATAGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCT 666133 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 | || || || || || ||||| || |||||| Sbjct 666134 TTCCAGTAAGGGTCTTGACAAATATCTGCATC 666165 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || |||||||| ||||||||||| | |||| ||| || Sbjct 666184 ACAAGGTGAAGGGTGGACTCCTTTTGAATATTATAATCAGCAAGGGTTCGGCCATCCTCG 666243 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| || || || | |||| | ||||| ||||| |||||||| || |||||||| Sbjct 666244 AGTTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGG 666303 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || || | || | || | |||||| || ||| || ||||| || | || || Sbjct 666304 ATCTTAGCCTTTA-CGTTGTCGATGGTGTCAGAGCTCTCCACCTCGAGGGTGATGGTCTT 666362 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| || || || || || ||||| |||||| Sbjct 666363 GCCAGTGAGGGTCTTGACGAAAATCTGCATC 666393 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | ||| | | || || || || || |||||||| |||| || || ||| Sbjct 530408 ATTCCTCCTCTGAGACGGAGAACGAGGTGAAGGGTGGATTCCTTCTGGACGTTGTAGTCG 530349 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || || | ||| ||||| || | |||| | ||||||||||| Sbjct 530348 GAAAGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCCGGA 530289 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || || ||||| || || | |||| || | | || | || | |||||| ||| ||| Sbjct 530288 GGGATCCCCTCTTTGTCCTGGA-TTTTGGTCTTAACGATCTCGATGGTGTCCGAACTCTC 530230 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || | || || || |||||||| || || || || |||||| Sbjct 530229 CACCTCAAGGGTTATTGTCTTCCCAGTTAGAGTCTTGACGAAGATCTGCATC 530178 >seq202 Length=4793652 Score = 111 bits (122), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | ||| | |||||| ||||| || || || ||||| || || |||||||| Sbjct 4328799 ATACCTCCCCTGAGTCGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATC- 4328741 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 || || | | ||| || | || || || || | || || | |||||||||| Sbjct 4328740 -TGCAAGTGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCG 4328682 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | |||||||||||||| || || || || |||| |||| ||||||||| || Sbjct 4328681 GAGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCT 4328622 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| ||||| | ||| || || ||||| || || |||||||| ||||| Sbjct 4328621 CAACTTCAAGAGTGATCGTCTTACCAGTTAGGGTCTTCACAAAAATCTGCAT 4328570 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | ||| | | ||| || || || || || || || || || ||||| || Sbjct 4082887 ATTCCTCCCCTGAGACGGAGCACAAGGTGGAGGGTAGACTCTTTCTGAATGTTATAGTCA 4082828 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | ||||| || || | ||||| | ||||||||||| Sbjct 4082827 GCCAAGGTGCGGCCATCCTCAAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCCGGA 4082768 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| ||||| || || || |||| || | || | ||| || ||| || Sbjct 4082767 GGGATTCCTTCCTTATCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTATCAGAACTTTC 4082709 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| || || |||| || ||||| || || || || |||||||| |||||| Sbjct 4082708 GACCTCAAGTGTAATTGTCTTGCCTGTAAGGGTCTTAACAAAAATCTGCATC 4082657 >seq700 Length=617226 Score = 102 bits (112), Expect = 7e-17 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCTGACGGTTTTAGAATCGTC 45190 || || || || || || ||||| ||||||||||| || ||| | || ||| || Sbjct 335077 ACGAGGTGGAGGGTCGACTCCTTCTGGATATTATAGTCAGCT-AGAGTGCGTCCATCCTC 335019 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | || ||||| ||| | || | |||||||||||||| ||||||||||| || || || Sbjct 335018 GAGCTGCTTTCCGGCGAAGATAAGGCGTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTG 334959 Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 | | || | | | || | || | ||||||||| ||||| || || || || | ||| | Sbjct 334958 GA-TCTTGGCCTTAACGTTGTCAATGGTGTCGGATGACTCCACCTCCAGGGTGATCGTCT 334900 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 | || ||||| |||||||| || || |||||| Sbjct 334899 TCCCCGTTAGGGTTTTTACGAAGATCTGCATC 334868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451497046816640