Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq36 111 2e-19
seq293 107 2e-18
seq2 96.9 4e-15
>seq36
Length=6822877
Score = 111 bits (122), Expect = 2e-19
Identities = 342/522 (66%), Gaps = 14/522 (3%)
Strand=Plus/Plus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| || ||||| ||||| || || || || || || || |||||
Sbjct 1783606 GCAAAGTCACAGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTGGAAAAAGTGAGACCA 1783665
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||| || || | |||||||| |||||| || || || || ||||||||||||||
Sbjct 1783666 GGCATTAGCCCTCTCTTCTTCAGCCAGAAGATGGCGCAGAAACTACCAGAGAAGAAGATG 1783725
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAAC 127699
||||| || || || || |||| | ||||| ||||| || ||| | || | |
Sbjct 1783726 CCCTCAACGCAAGCAAATGCAAGAATTCGCTCTGCAAAAGAATCGGA---GGCGTCGATC 1783782
Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG 127759
|| | |||||||||||||| ||| || || ||||||| ||| || | |||
Sbjct 1783783 CAGCGGAGAGCCCACTGTGCCTTGCGGGCGACGCAGGGAACGGTCTCGATAGCATGGAAG 1783842
Query 127760 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 127819
|| | | || |||| | ||||||||||| | || | || || | |||
Sbjct 1783843 AGGTGCGATTTCTCTGCGGAGTCTTTGATGTAGGTTTCGAGAAGCAGGCTGTACATCTCG 1783902
Query 127820 CCGTGGACCATTTCATTATGGC--ACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 127877
||||| |||| ||||| |||| | | ||||||| |||||| || | ||
Sbjct 1783903 GAGTGGATGTTTTC--GATGGCGATCTGAAATCCATAGAAAGCGCGCGCCTCCGGGAGCT 1783960
Query 127878 GTACCTCATCGGCA--AAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 127935
||||||| | ||| || | | || ||||| | ||| ||||| ||||| | ||
Sbjct 1783961 GTACCTC--CCGCATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCCGTCGGAAGCGGC 1784018
Query 127936 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGG--TC-TTCCA 127992
|| || || || | | ||| ||| | | |||| | | | |||| || |||||
Sbjct 1784019 GAAGAAAGCGAGAACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAGGGATTCATTCCA 1784078
Query 127993 GTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|| | |||||| | || ||||| || || || || |||||
Sbjct 1784079 GTGGCGGAGATCTTGGGACAGATCAACTTCTTCTGCTGTCCA 1784120
>seq293
Length=413263
Score = 107 bits (118), Expect = 2e-18
Identities = 121/162 (75%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || |||||| ||||||||||| |||||||| || || || || |||||
Sbjct 227095 AGCAAAGTCGCAGTGGAGTCCCTCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAGACC 227036
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
|||||| | ||| |||||||| | |||||| || || || || ||| |||||||| ||
Sbjct 227035 TGGCATCAAACCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGCCGGAGAAGAAAAT 226976
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGA 127680
|| || || ||||| || || | | ||||| ||||| ||
Sbjct 226975 ACCTTCGACGCACGCAAAAGCGAGAATCCGCTCAGCAAATGA 226934
>seq2
Length=81761211
Score = 96.9 bits (106), Expect = 4e-15
Identities = 225/334 (67%), Gaps = 4/334 (1%)
Strand=Plus/Plus
Query 12735 TCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCGAAG 12794
|| ||||| || |||||| || || || | || | ||| || || | || ||
Sbjct 31018738 TCCAGGATGTCTGCGCGGTTAGTAGCTGCAAGAACTATGATACCTGTATTTCCTTCAAAA 31018797
Query 12795 CCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGCATA 12854
|||||||| |||||||| || || || | |||||||| | |||||||||| | |
Sbjct 31018798 CCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCATTCCCCCCTCCA 31018857
Query 12855 CCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT 12914
||||| | |||||| | || || || |||||||| |||| ||| || ||||| |||
Sbjct 31018858 ATACCCGTTCCTCGTTGCCTTCCAACAGCATCAATTTCATCAACGAATACAATACAAGGT 31018917
Query 12915 TGATTTTCACGGGCAA-CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAA 12973
||| || || ||| ||| | ||| || || | ||| || ||||| |||||
Sbjct 31018918 GCATTCTCTTTAGCCTTCTTGAAA-AGATCACGAACCCGTGAGGCGCCAACACCAACAAA 31018976
Query 12974 CATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGA 13032
|||||||||||| | | | | | || | || ||||| || | |||||| || |
Sbjct 31018977 CATCTCCACAAACTCAGATCCTG-AGATAGAGAAAAAGGGAACACCAGCTTCACCAGCAA 31019035
Query 13033 TGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 13066
|||| ||| || || ||||| || || || ||
Sbjct 31019036 TGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGG 31019069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 612820194637440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |