Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq293 134 2e-26 seq36 98.7 2e-15 >seq293 Length=413263 Score = 134 bits (148), Expect = 2e-26 Identities = 534/834 (64%), Gaps = 10/834 (1%) Strand=Plus/Minus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 ||||||| || || || ||||| |||| || || || |||||| | | ||||| | Sbjct 227369 TCTTCTCAAAGAAATTAGTCTTACCCTGCAGCGAGATGAGTTCCATCCAATCAAATGGAT 227310 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTG-TCTGCCACAAAT 159766 || || ||| ||| | | || ||||| ||| ||| | | |||||||| ||| Sbjct 227309 TCGATACACCATACATCTTGTCATAGCCCAGAGCT-CCAACAAGCCGATCTGCCACGAAT 227251 Query 159767 TCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCC 159826 || || |||| | ||| | || ||| ||||||| || |||||| || || Sbjct 227250 TCAATATAGCGGCTCATTAGATCTGCGTTCATCCCCACAAGAGCGCAGGGGAGTGCATCA 227191 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTAC 159886 | | ||| ||||| ||||| || || || |||| ||||||| | || | || | | Sbjct 227190 CAAACAAATTCCTTTTCAATATCTACAGCATCGGCAACAATCTCCCGAACCCTCTCCTCC 227131 Query 159887 CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCC 159946 |||| | | || || |||| ||||| |||||||||||||| |||||| Sbjct 227130 GAAATCTTGTTGATCAGAAGGC---TATACAGAAGGCAAGCAAAGTCGCAGTGGAGTCCC 227074 Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006 ||||| |||||||||| |||||| || | |||| || ||||| | || ||| ||| Sbjct 227073 TCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAGACCTGGCATCAAACCGCGCTTCTTG 227014 Query 160007 AGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 ||||| || |||| |||| |||| ||| || || || || || ||| |||||| || Sbjct 227013 AGCCAGAAGATGG-CGCAGAAGCTGCCGGAGAAGAAAATACCTTCGACGCACGCAAAAGC 226955 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 | | || |||| |||| || | || |||| |||| | ||||| | ||| Sbjct 226954 GAGAATCCGCTCAGCAAATGATTCAGAGGCGTCA---ATCCAGCGCAGTGCCCACTGAGC 226898 Query 160126 CTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCAC 160185 ||| |||| ||| || | | |||| |||| ||| | || | || | Sbjct 226897 CTTACGGGCGACGCAGGGTACGGTTTCGATGGCGCGAAAAAGATTGGATTTTTCGGTGGA 226838 Query 160186 ATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGC 160245 |||||||| || | | || ||||| || | ||| | ||||||||||| Sbjct 226837 GTCCTTGATGTAGGTCTCGAGGAGAAGACTATACATCTCGGAGTGAATGTTTTCGATGGC 226778 Query 160246 CATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTG 160305 ||||| ||| |||||| ||||||| || || ||||| | |||| | | Sbjct 226777 GATCTGGAAGCCATAGAAAGCGCGCGCCTCCGGAAGTTGAACCTCTCGCATGAAGCGTCC 226718 Query 160306 ACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGAT 160365 | || || | || | || || | || || ||||| |||| |||| | ||| Sbjct 226717 GGCGAGGTTCTCCAGCACGATACCATCAGAAGCGGCGAAGAAGGCCAGGACGTAGGTGAT 226658 Query 160366 GAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCCAAATC 160425 || || | |||||| | |||| | | ||||| || |||||||| | | ||| Sbjct 226657 AAAGTGGCGCTCGTCAGAGGTGAGGGTGTGATCCCATTGCCGAACGTCTTGTGAGAGATC 226598 Query 160426 AACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 ||||||||||| |||| | |||| || | |||||||| |||| || Sbjct 226597 GACCTCTTCCGCAGTCCAGAAAGAGGCCTCTGCTTTCTTGTACATCTCCCAAAT 226544 >seq36 Length=6822877 Score = 98.7 bits (108), Expect = 2e-15 Identities = 368/570 (65%), Gaps = 13/570 (2%) Strand=Plus/Plus Query 159915 ACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACA 159974 |||| || ||||||||||| |||||||| ||||| || ||||| || | ||||||||| | Sbjct 1783595 ACAGCAGACACGCAAAGTCACAGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTGGAAA 1783654 Query 159975 TGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCA-AAAGCACCG 160033 |||| || ||||| | ||| | | || ||||| || |||| |||| ||| ||| Sbjct 1783655 AAGTGAGACCAGGCATTAGCCCTCTCTTCTTCAGCCAGAAGATGG-CGCAGAAACTACCA 1783713 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || ||||| ||||| ||| ||||| || | | | ||| ||||||| || | Sbjct 1783714 GAGAAGAAGATGCCCTCAACGCAAGCAAATGCAAGAATTCGCTCTGCAAAAGAATCGGAG 1783773 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCG 160153 | ||| | |||| | ||||| | ||||| |||| ||| || | | |||| Sbjct 1783774 GCGTC---GATCCAGCGGAGAGCCCACTGTGCCTTGCGGGCGACGCAGGGAACGGTCTCG 1783830 Query 160154 ACGGCGTTAAACAATCTGTCC---TGCTCCTTCACA-TCCTTGATCAGAGTAGCAATCAG 160209 | || | || | || | | || || | | || ||||| || | | || Sbjct 1783831 ATAGCATGGAAGA---GGTGCGATTTCT-CTGCGGAGTCTTTGATGTAGGTTTCGAGAAG 1783886 Query 160210 CTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGT 160269 | |||||| || | ||| | ||||||||||| |||||||| |||||| Sbjct 1783887 CAGGCTGTACATCTCGGAGTGGATGTTTTCGATGGCGATCTGAAATCCATAGAAAGCGCG 1783946 Query 160270 CGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCC 160329 ||||||| | ||| |||||| | |||| | | | || || | ||| | || Sbjct 1783947 CGCCTCCGGGAGCTGTACCTCCCGCATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCC 1784006 Query 160330 GTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAG 160389 ||||| || || |||||||| | ||||| | | |||||| | ||||| | |||| Sbjct 1784007 GTCGGAAGCGGCGAAGAAAGCGAGAACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAG 1784066 Query 160390 TCTCTTTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGC 160449 | | |||||| | ||||||| || |||||| ||||| || |||| | Sbjct 1784067 GGATTCATTCCAGTGGCGGAGATCTTGGGACAGATCAACTTCTTCTGCTGTCCAGAAAGA 1784126 Query 160450 AGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 || | || | |||||||| ||||||| Sbjct 1784127 GGCTTCGGCTTTCTTGTACATCTCCCAGAT 1784156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794264785207040