Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq700 131 2e-25
seq640 116 4e-21
seq876 113 5e-20
seq2 86.0 7e-12
>seq700
Length=617226
Score = 131 bits (144), Expect = 2e-25
Identities = 148/196 (76%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| |||||||| ||||| | ||||||||| | || ||||||||||| ||||||||
Sbjct 335060 CTCCTTCTGGATATTATAGTCAGCTAGAGTGCGTCCATCCTCGAGCTGCTTTCCGGCGAA 335001
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||| |||||||| | || | || ||||||||| |||||| ||| | |||
Sbjct 335000 GATAAGGCGTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT-AACGT 334942
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| || ||||| |||| ||||| || || ||||| || ||||| |
Sbjct 334941 TGTCAATGGTGTCGGATGACTCCACCTCCAGGGTGATCGTCTTCCCCGTTAGGGTTTTTA 334882
Query 46581 CAAAGATTTGCATTTT 46596
| ||||| ||||| ||
Sbjct 334881 CGAAGATCTGCATCTT 334866
>seq640
Length=221176
Score = 116 bits (128), Expect = 4e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| || |||||||| |||| || || || |||| || |||||||| || || ||
Sbjct 161981 TCCTTCTGAATATTGTAATCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTCCCAGCAAAG 162040
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| ||||||||||| || | || | || |||||||||| |||||| ||| | |||
Sbjct 162041 ATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTC-GCTTTAACGTT 162099
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | |||||| || ||||| || | ||||| || || ||||| || ||||| ||
Sbjct 162100 GTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTGAC 162159
Query 46582 AAAGATTTGCATTTTGCA 46599
||||||||||| || ||
Sbjct 162160 GAAGATTTGCATCTTTCA 162177
>seq876
Length=1913211
Score = 113 bits (124), Expect = 5e-20
Identities = 142/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||||||||| |||||||| || || || || | || ||||||||||| ||||||||
Sbjct 530825 TCCTTTTGGATGTTGTAGTCAGAGAGGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAG 530766
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| | ||||||||| | || | || ||||||||| || || |||| |
Sbjct 530765 ATCAACCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGAATTTTGGATTTGACATTT 530706
Query 46523 GCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579
| | |||||| |||| ||||| || | ||||||||| ||||| || || || ||
Sbjct 530705 TCGATCGTGTCAGAGCTC---TCCACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTC 530649
Query 46580 ACAAAGATTTGCAT 46593
||||| || |||||
Sbjct 530648 ACAAATATCTGCAT 530635
Score = 111 bits (122), Expect = 2e-19
Identities = 143/196 (73%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
||| || ||||| ||||||||||| || || || |||| |||||||| || ||||||||
Sbjct 530598 CTCTTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAA 530539
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| | ||||||||| | || | || ||| |||||| ||| || ||| | |
Sbjct 530538 AATCAACCTCTGCTGGTCCGGTGGGATGCCCTCTTTGTCCTGGATTTTTGACTTAACGAT 530479
Query 46522 CGCCACCGTGTCG---CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | |||||| ||| ||||| || | || ||||| ||||| || || |||||
Sbjct 530478 TTCGATGGTGTCGGAACTC---TCCACGTCGAGAGTAATGGTCTTGCCAGTGAGGGTTTT 530422
Query 46579 AACAAAGATTTGCATT 46594
|||||||| ||||||
Sbjct 530421 GACAAAGATCTGCATT 530406
Score = 86.0 bits (94), Expect = 7e-12
Identities = 160/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || || | ||| | ||| || || | ||| ||||| ||||||||||| || |
Sbjct 666394 CCACCCCTAAGACGAAGCACAAGGTGTAGGGTAGATTCCTTCTGGATATTGTAATCAGCA 666453
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| || || | || || |||||||| ||||| || |||| | ||| || || | |||
Sbjct 666454 AGGGTTCGGCCATCCTCTAGCTGCTTTCCGGCAAAGATCAGCCTCTGTTGATCCGGCGGG 666513
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542
| || |||||||||| ||||| ||| | ||| | | | || || ||| ||
Sbjct 666514 ATGCCCTCCTTGTCCTGTATCTTAGCCTTCA-CGTTGTCGATGGTATCAGAACTC---TC 666569
Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || | |||||||| ||||| || || ||||| || ||||| |||||
Sbjct 666570 CACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTGACGAAGATCTGCAT 666620
Score = 82.4 bits (90), Expect = 9e-11
Identities = 157/230 (68%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|||||||| | ||| | || || || | || ||||| |||| |||||||||||
Sbjct 530405 CCTCCTCTGAGACGGAGAACGAGGTGAAGGGTGGATTCCTTCTGGACGTTGTAGTCGGAA 530346
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| |||| || || ||||| ||||| || |||| | ||||||||| | ||
Sbjct 530345 AGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGG 530286
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA---TTCC 46543
| | ||| |||||| ||| || |||| | || | | ||||| ||| |||
Sbjct 530285 ATCCCCTCTTTGTCCTGGATTTTGGTCTTAACGATCTCGATGGTGTC---CGAACTCTCC 530229
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | || || || || || || || || || || ||||| |||||
Sbjct 530228 ACCTCAAGGGTTATTGTCTTCCCAGTTAGAGTCTTGACGAAGATCTGCAT 530179
Score = 82.4 bits (90), Expect = 9e-11
Identities = 138/196 (70%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
||||||||| ||||| || || | || || || | || ||||| ||||||||||| ||
Sbjct 666201 CTCCTTTTGAATATTATAATCAGCAAGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCAAA 666260
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| | |||||| || | || | || |||||| || |||||| ||| | |||
Sbjct 666261 GATCAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGGATCTTAGCCTTTA-CGT 666319
Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577
| | | ||||| |||| ||||| || | |||||||| ||||| || || || |
Sbjct 666320 TGTCGATGGTGTCAGAGCTC---TCCACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCT 666376
Query 46578 TAACAAAGATTTGCAT 46593
| || || || |||||
Sbjct 666377 TGACGAAAATCTGCAT 666392
>seq2
Length=81761211
Score = 86.0 bits (94), Expect = 7e-12
Identities = 160/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| || | ||| | || || || | ||| |||||| ||||| |||||||| |
Sbjct 19640912 CCTCCCCTCAGACGTAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGCA 19640971
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| || || | || || ||||||||||||||||| ||||| | ||||| |||| ||
Sbjct 19640972 AGGGTACGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAACCTTTGCTGATCGGGAGGG 19641031
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542
| || ||| || ||| || || ||| | ||||| | | ||||| ||| |||
Sbjct 19641032 ATGCCCTCTTTATCCTGAATTTTGGCCTTCA-CGTCGTCGATGGTGTCTGAGCT---TTC 19641087
Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | ||||| || || || || || || || || ||||| |||||
Sbjct 19641088 AACCTCTAGGGTGATAGTCTTACCGGTGAGAGTCTTCACGAAGATCTGCAT 19641138
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/200 (71%), Gaps = 8/200 (4%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || |||||||||| || ||||| | || || ||||||||||| || ||
Sbjct 19641500 CTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCAAA 19641559
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| | ||||| || | || | | |||||||||| ||| || ||| | |||
Sbjct 19641560 AATCAACCTTTGCTGATCCGGTGGGATACCCTCCTTGTCCTGGATTTTGGCCTT-AACGT 19641618
Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577
| | | || || ||| |||||| || | ||||| || ||||| || || || |
Sbjct 19641619 TGTCGATGGTATCAGAGCT---TTCCACCTCGAGGGTGATCGTCTTGCCAGTAAGAGTCT 19641675
Query 46578 TAACAAAGATTTGCATTTTG 46597
| || ||||| ||||| |||
Sbjct 19641676 TCACGAAGATCTGCATCTTG 19641695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564605446039680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |