Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq293 172 5e-38
seq876 136 4e-27
seq700 102 8e-17
seq2 93.3 4e-14
seq921 84.2 2e-11
>seq293
Length=413263
Score = 172 bits (190), Expect = 5e-38
Identities = 377/558 (68%), Gaps = 15/558 (3%)
Strand=Plus/Minus
Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953
||||||||||||||| || | |||||||| | || ||||| ||||| ||||| |
Sbjct 227098 GCAAGCAAAGTCGCAGTGGAGTCCCTCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAG 227039
Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013
|| ||||| | ||||| || |||||||| || |||||| ||| ||||| || |||||
Sbjct 227038 ACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGCCGGAGAAGAA 226979
Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073
| || |||||| ||| ||||| | | ||||| | || | ||| | | |
Sbjct 226978 AATACCTTCGACGCACGCAAAAGCGAGAATCCGCTCAGCAAA---TGATTCAGAGGCGTC 226922
Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTT 133133
||||||||||| ||||| | ||||| |||||| || | ||||||||||||
Sbjct 226921 AATCCAGCGCAGTGCCCACTGAGCCTTACGGGCGACGCAGGGTACGGTTTCGATGGCGCG 226862
Query 133134 CAACAAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATA 133190
|| | | | ||| ||| | ||| | | |||||| |||| ||| |||
Sbjct 226861 AAAAAGATTGGATTT---TTCGGTGGAGTCCTTGATGTAGGTCTCGAGGAGAAGACTATA 226805
Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA-AAAGCACCGCGCCTCGA 133249
||| || ||||| | ||| || |||||||| || ||||| || ||||| ||||||||
Sbjct 226804 CATCTCGGAGTGAATGTTTTCGATGGCGATCTGGAAGCCATAGAAAGC-GCGCGCCTCCG 226746
Query 133250 CCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGG 133309
| || || ||| | ||| || || | || || || ||||| || || |
Sbjct 226745 GAAGTTGAACCTCTCGCATGAAGCGTCCGGCGAGGTTCTCCAGCACGATACCATCAGAAG 226686
Query 133310 CGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA---AGCGCT 133366
||||||| |||||||| |||| |||| || |||||||||| | | | | | |
Sbjct 226685 CGGCGAAGAAGGCCAGGACGTAGGTGATAAAGTGGCGCTCGTCAGAGGTGAGGGTGTGAT 226626
Query 133367 CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGG 133426
|||| | || ||| | || || || ||||| || | ||||| || || ||||| |
Sbjct 226625 CCCATTGCCGAACGTCTTGTGAGAGATCGACCTCTTCCGCAGTCCAGAAAGAGGCCTCTG 226566
Query 133427 CTTTTTTGTACATACTCC 133444
|||| |||||||| ||||
Sbjct 226565 CTTTCTTGTACAT-CTCC 226549
>seq876
Length=1913211
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || || || ||||| ||||| ||||| ||||| || ||||||| ||| |
Sbjct 530406 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTCTCGACGTGGAGAGTTC 530465
Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
||||| | | ||| |||| |||||||| ||||||||||| || || | |||||
Sbjct 530466 CGACACCATCGAAATCGTTAAGTCAAAAATCCAGGACAAAGAGGGCATCCCACCGGACCA 530525
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | |||| ||| || |||||||| || |||| || |||||| |||||||||
Sbjct 530526 GCAGAGGTTGATTTTCGCCGGAAAACAGCTCGAGGACGGCCGAACCCTCTCCGACTACAA 530585
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| || || |||| || || | || || ||| | || || ||
Sbjct 530586 CATCCAGAAAGAGTCGACCCTCCACCTTGTTCTTCGTCTTAGGGGAGG 530633
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| ||||| || || || ||||| ||||| |||||||| | || || ||| | |
Sbjct 530635 ATGCAGATATTTGTGAAGACCCTCACCGGCAAGACCATCACGCTTGAGGTGGAGAGCTCT 530694
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | ||| | ||| ||||| | ||||| ||||| || ||| | |||||
Sbjct 530695 GACACGATCGAAAATGTCAAATCCAAAATTCAAGACAAGGAGGGCATCCCCCCGGACCAG 530754
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| || | || | ||| || || ||||| || || | || |||||| |||||||||
Sbjct 530755 CAGAGGTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGAACCCTCTCTGACTACAAC 530814
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| | || || ||| | || || || | ||||| ||
Sbjct 530815 ATCCAAAAGGAATCCACCCTCCATCTCGTTCTCCGCCTCAGAGGGGG 530861
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| ||||| || || || ||||| ||||| || || ||| | ||||| ||| | ||
Sbjct 529951 ATGCAGATATTTGTCAAGACCCTCACCGGCAAGACAATAACCCTTGACGTGGAGAGCTCC 530010
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | || ||||| |||| ||||||| || || || ||||| || | || ||
Sbjct 530011 GATACGATTGAAAACG-TTAAGTCTAAAATCCAGGATAAGGAAGGAATCCCACCGGATCA 530069
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | ||| ||||||||||| || |||| || || ||| |||||||||
Sbjct 530070 GCAGAGGCTGATCTTCGCTGGCAAACAGCTTGAGGACGGCCGAACGCTCTCCGACTACAA 530129
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| || || | || || || | || || ||| | || || ||
Sbjct 530130 CATCCAGAAAGAGTCTACCCTCCACCTTGTTCTTCGTCTTAGGGGAGG 530177
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || || || || || ||| | || || ||| |
Sbjct 530179 ATGCAGATCTTCGTCAAGACTCTAACTGGGAAGACAATAACCCTTGAGGTGGAGAGTTCG 530238
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | |||| ||||||| ||||||||||| || || | |||||
Sbjct 530239 GACACCATCGAGATCGTTAAGACCAAAATCCAGGACAAAGAGGGGATCCCTCCGGACCAG 530298
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| || | || || || || || || |||| |||||||| ||||||||||
Sbjct 530299 CAGAGGCTGATCTTTGCCGGAAAGCAACTTGAGGACGGTCGCACCCTTTCCGACTACAAC 530358
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||| |||||| | || || || | || || ||| | ||||| ||
Sbjct 530359 GTCCAGAAGGAATCCACCCTTCACCTCGTTCTCCGTCTCAGAGGAGG 530405
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || || || ||||| ||||| ||||| || || ||| |||| || ||| | |
Sbjct 530862 AATGCAGATTTTTGTCAAAACCCTCACTGGCAAGACTATTACCCTCGAGGTGGAGAGCTC 530921
Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| ||| | | | || || |||| ||||| |||||| || | | |||||
Sbjct 530922 TGACACCGTCGAGATAGTGAAGTCGAAGATCCAGGACAAGGAGGGACTTTCACCGGACCA 530981
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || | || | ||| || || ||||| || |||| || ||||| |||||||||
Sbjct 530982 GCAAAGGTTGATCTTCGCCGGTAAGCAGCTTGAGGACGCTCGTACCCTTGCCGACTACAA 531041
Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446
||| || |||||| | || || ||
Sbjct 531042 CATTCAGAAGGAATCTACCCTTCA 531065
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| ||||| || ||||| || || || ||||| ||||| | || || ||| |
Sbjct 665708 ATGCAGATATTTGTGAAAACACTTACTGGGAAAACTATCACTCTTGAGGTGGAGAGTTCA 665649
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | ||| || | ||||||||||| || || | || ||
Sbjct 665648 GACACAATTGATAACG-TGAAGGCAAAGATTCAGGACAAAGAGGGGATACCGCCAGATCA 665590
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| ||||||| | ||| || |||||||| || || | |||||||| || |||||
Sbjct 665589 GCAGAGGCTCATCTTCGCTGGAAAACAGCTTGAGGATGGCCGCACCCTTGCGGATTACAA 665530
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| || |||||| | || || || | || || |||
Sbjct 665529 CATTCAGAAGGAATCCACCCTCCACCTCGTCCTCCGT 665493
>seq700
Length=617226
Score = 102 bits (112), Expect = 8e-17
Identities = 149/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || ||||||||||| || ||||| || || |||||| | || || ||| |
Sbjct 334865 AAAGATGCAGATCTTCGTAAAAACCCTAACGGGGAAGACGATCACCCTGGAGGTGGAGTC 334924
Query 38300 CACCGACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
|||||| | || |||| |||| | || |||| ||||| || || ||||| | |
Sbjct 334925 ATCCGACACCATTGACAACG-TTAAGGCCAAGATCCAGGACAAGGAAGGCATTCCACCGG 334983
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| || || || || | ||| || || ||||| || || | ||||| || ||||
Sbjct 334984 ACCAGCAACGCCTTATCTTCGCCGGAAAGCAGCTCGAGGATGGACGCACTCTAGCTGACT 335043
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCA 38446
| || ||||| ||||| |||| || ||
Sbjct 335044 ATAATATCCAGAAGGAGTCGACCCTCCA 335071
>seq2
Length=81761211
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || || || ||||| || |||||| |||| || || |
Sbjct 19641694 AAGATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACGATCACCCTCGAGGTGGAAAGC 19641635
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| || | | | | |||| |||| | ||||||| ||||| ||||| || || | ||
Sbjct 19641634 TCTGATACCATCGACAACG-TTAAGGCCAAAATCCAGGACAAGGAGGGTATCCCACCGGA 19641576
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|| || || | |||| || ||||| ||||| || || | |||||||| ||||||
Sbjct 19641575 TCAGCAAAGGTTGATTTTTGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCCGACTA 19641516
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCAT 38447
|||||| || ||||| | || ||| ||
Sbjct 19641515 CAACATTCAGAAGGAGTCAACCCTGAAT 19641488
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || || |||||| | || || || | |
Sbjct 19641138 ATGCAGATCTTCGTGAAGACTCTCACCGGTAAGACTATCACCCTAGAGGTTGAAAGCTCA 19641079
Query 38304 GACAGCGTGCAA-ACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | ||| | || | ||||| | || |||||||| || || |||| ||
Sbjct 19641078 GACACCATCGACGACG-TGAAGGCCAAAATTCAGGATAAAGAGGGCATCCCTCCCGATCA 19641020
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || | || | ||| ||||| |||||||| || | || ||||| ||||||||
Sbjct 19641019 GCAAAGGTTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGTACCCTTGCAGACTACAA 19640960
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| | || || || | || || ||| |||| || ||
Sbjct 19640959 CATCCAGAAGGAGTCCACACTCCACCTTGTTCTACGTCTGAGGGGAGG 19640912
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || || || ||||| ||| | || || ||| | |
Sbjct 19640910 ATGCAGATCTTCGTGAAGACTCTTACTGGGAAGACCATTACCTTGGAGGTTGAGAGCTCG 19640851
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| || |||| ||||| ||||| || || | |||||
Sbjct 19640850 GACACCATCGATAACG-TGAAAGCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCA 19640792
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || || || || || || || | |||||| || ||||||||
Sbjct 19640791 GCAGAGGCTTATCTTTGCCGGAAAGCAACTTGAGGATGGGCGCACTCTGGCGGACTACAA 19640732
Query 38423 CATCCAAAAGGA 38434
|||||| |||||
Sbjct 19640731 CATCCAGAAGGA 19640720
>seq921
Length=516242
Score = 84.2 bits (92), Expect = 2e-11
Identities = 152/220 (69%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || ||||| ||||| || |||||| |||| || || |
Sbjct 187297 AAGATGCAGATCTTCGTGAAGACTCTCACAGGCAAGACAATCACCCTCGAGGTGGAAAGC 187238
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| || | | | | |||| |||| | ||||||| | ||| || | || | | ||
Sbjct 187237 TCTGATACCATCGATAACG-TTAAGGCTAAAATCCAGGGCAAGGACGATATCTCACCGGA 187179
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|| || || | |||| || ||||||||||| || || | | ||||| ||||||
Sbjct 187178 TCAGCAAAGGTTGATTTTTGCTGGCAAACAGCTTGAGGATGGTCATACCCTTGCCGACTA 187119
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| |||||||| | || || ||| | || || |||
Sbjct 187118 CAACATTCAAAAGGAGTCAACCCTACATCTTGTTCTCCGT 187079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499612706498560
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