Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq101 152 2e-31 seq277 122 3e-22 seq140 109 2e-18 seq258 107 8e-18 seq202 107 8e-18 seq2 102 3e-16 seq62680 93.3 2e-13 seq876 84.2 9e-11 >seq101 Length=418085 Score = 152 bits (168), Expect = 2e-31 Identities = 272/396 (69%), Gaps = 11/396 (3%) Strand=Plus/Minus Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276 || |||||||| |||| || ||| | || || ||||| || |||||||| | || Sbjct 198771 TACAAAGGTGAGGATAAACAGTTCGCTGCAGAGGAGATTTCCTCAATGGTTCTGATAAAG 198712 Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336 |||| || | || ||| || |||| | | | | |||| || |||||||| Sbjct 198711 ATGAGGGAGATTGCTGAAGCCTACCTTGGCACCACCATCAAGAATGCTGTTGTTACTGTT 198652 Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396 |||||||| ||||| ||| |||| || ||||| || || ||||| || ||| |||||| Sbjct 198651 CCCGCTTACTTCAACGATTCACAGCGCCAAGCCACCAAGGATGCTGGGGTTATCGCTGGT 198592 Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGA 451456 | ||||| | || ||||| ||||| ||||| || ||||| | || ||||| || | Sbjct 198591 CTTAATGTCATGCGCATTATCAATGAGCCTACTGCCGCTGCCATCGCCTATGGTCTCG-- 198534 Query 451457 AAATCAAAAG-----AAAC--AGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509 || ||||| | | | || || ||| || | | || ||| ||||||| || Sbjct 198533 --ATAAAAAGTCCTCTAGCGTGGGCGAGAAGAATGTTCTTATTTTCGATCTTGGTGGCGG 198476 Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAA 451569 ||| |||| ||| | || | || ||||| || | ||||| || ||||| || Sbjct 198475 AACCTTTGATGTCTCTCTTCTCACCATCGAAGAAGGCATCTTTGAGGTCAAGGCCACGGC 198416 Query 451570 TGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||||| |||||||| |||||||||||| ||||||| Sbjct 198415 CGGTGACACTCATCTTGGAGGTGAAGATTTTGATAA 198380 Score = 122 bits (134), Expect = 3e-22 Identities = 351/531 (66%), Gaps = 12/531 (2%) Strand=Plus/Minus Query 451967 GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTT 452026 ||||| | || || |||||| | ||||| ||||| |||||||| |||||||||||||| Sbjct 198028 GGAAAGGAGCTCTGCAAGAGCATTAATCCGGATGAGGCTGTTGCTTATGGTGCTGCAGTC 197969 Query 452027 CAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGAT 452086 |||||||||||||| | || || |||| || | ||| |||| || | || Sbjct 197968 CAAGCAGCTATTCTGAGCGGGGAAGGCAATGAGAAGGTGCAGGATCTTCTATTGCTGGAC 197909 Query 452087 GTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAA 452146 ||||| || || ||||| || | || || |||||||| | |||||| || ||| Sbjct 197908 GTAACCCCGCTTTCTCTAGGCTTGGAGACTGCTGGTGGTGTCATGACTGTCTTGATT--C 197851 Query 452147 CGAGGA--ACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGT--GATAA 452202 | |||| || ||||||| || ||| || || ||| | | | || || Sbjct 197850 CCAGGAACACCACTATTCCCACCAAGAAGGAGCAGGTCTTCTCTAC--CTACTCCGACAA 197793 Query 452203 CCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAA 452262 ||| || ||||| ||| || || | |||||| || | | | ||| ||||| || Sbjct 197792 CCAGCCGGGTGTTCTTATCCAGGTTTATGAAGGTGAGAGGACGAGGACCAAGGATAACAA 197733 Query 452263 TAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAAT 452322 || || | ||| || || |||||| || ||| ||||| ||||| || Sbjct 197732 CTTGCTTGGCAAGTTTGAGCTCTCCGGCATTCCGCCAGCCCCACGGGGAGTGCCTCAGAT 197673 Query 452323 TGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATC 452382 | || || |||| | ||||| |||||||| || ||||| || | || || | Sbjct 197672 TACGGTTTGCTTTGATATCGATGCCAATGGTATCCTGAATGTCTCCGCTGAGGATAAGAC 197613 Query 452383 ATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAA-AAACCGTTTATCTAAAGAA 452440 |||| || |||| ||||| || || || ||||| || | | ||| | ||||| Sbjct 197612 GACTGGGCAA-AAGAACAAAATCACCATCACAAATGACAAGGGAAGGCTTAGC-AAAGAT 197555 Query 452441 GATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAA 452491 || ||||| |||||||| | ||||| || || | |||| ||| |||||| Sbjct 197554 GAAATTGAGAAAATGGTGCAGGAAGCTGAGAAGTACAAGTCTGAAGATGAA 197504 >seq277 Length=589295 Score = 122 bits (134), Expect = 3e-22 Identities = 252/375 (67%), Gaps = 9/375 (2%) Strand=Plus/Minus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 ||||| |||||||||| ||||| |||||||| | ||| ||| || | || || Sbjct 414408 TTTGCAGCTGAAGAAATCTCATCAATGGTTCTAATTAAGATGCGTGAGATTGCTGAGGCC 414349 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 ||| | || || | || | | || || | ||||||||||| || |||||||| | Sbjct 414348 TATTTAGGATCCTCTGTAAAGAACGCTGTTGTCACTGTTCCCGCATACTTCAATGACTCG 414289 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 || || ||||| || || ||||| || ||||| ||| | |||||| | |||| || Sbjct 414288 CAGCGCCAAGCCACAAAGGATGCTGGTGTCATTGCCGGTCTTAATGTTATGAGAATAATC 414229 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA------TCAAAAGAAACA 451471 ||||| || || || ||||| | || ||||| || | ||| || | | | Sbjct 414228 AATGAGCCGACTGCTGCTGCCATCGCCTATGGCCTTGACAAAAAGGCTTCCAGCG---TA 414172 Query 451472 GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTT 451531 | || |||||| || | | || || || || || || ||| ||| ||| | || Sbjct 414171 GGTGAGAAAAATGTTCTCATTTTCGACTTGGGCGGTGGGACTTTCGATGTCTCTCTCCTC 414112 Query 451532 TCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGT 451591 | || ||||| || | |||||||| |||||||| || || |||||||| || ||| Sbjct 414111 ACCATCGAAGAGGGTATTTTTGAAGTCAAGGCAACTGCAGGAGACACTCATCTTGGTGGT 414052 Query 451592 GAAGATATTGATAAT 451606 || ||| |||| ||| Sbjct 414051 GAGGATTTTGACAAT 414037 >seq140 Length=1825301 Score = 109 bits (120), Expect = 2e-18 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 ||||| || || ||||||||||| || || ||| ||||| ||||| | | || Sbjct 676491 GTTCTAACCAAGATGAAAGAAACCGCTGAGGCTTATCTTGGTAAATCAGTTTCAAAAGCC 676432 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || || || ||||| |||||||| |||||||| || || || || || |||||||| ||| Sbjct 676431 GTGATCACCGTTCCTGCTTATTTTAATGATGCGCAGCGACAGGCGACAAAAGATGCTGGA 676372 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 |||||||| || ||||||| || || || ||||| || || || || || || | Sbjct 676371 AGAATTGCTGGATTGGATGTTCTCCGGATCATCAATGAGCCGACTGCTGCGGCGCTGTCC 676312 Query 451445 TATGG 451449 ||||| Sbjct 676311 TATGG 676307 >seq258 Length=1945713 Score = 107 bits (118), Expect = 8e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 391140 CAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTT 391199 || || |||||||| ||||| ||||||||||||||||| ||||| | |||||||| | Sbjct 1660422 CAGGACAAGGAAGGCATTCCACCTGATCAACAACGTTTGATTTTTGCTGGGAAACAGTTA 1660481 Query 391200 GAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTA 391259 |||||||| | || || || ||||| || ||| | ||||| |||| || || ||||| Sbjct 1660482 GAAGATGGTCGGACCTTAGCAGATTACAACATTCAGAAGGAGTCAACTCTCCATTTAGTT 1660541 Query 391260 TTAAGACTGAGAGG 391273 || || || ||||| Sbjct 1660542 TTGAGGCTTAGAGG 1660555 >seq202 Length=4793652 Score = 107 bits (118), Expect = 8e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || || || || || || ||||| ||||| || ||| ||| Sbjct 4082658 ATGCAGATTTTTGTTAAGACCCTTACAGGCAAGACAATTACACTTGAGGTCGAAAGTTCT 4082717 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | || || || || |||||||||||||| ||||| || || Sbjct 4082718 GATACCATTGACAACGTCAAGGCCAAGATCCAGGATAAGGAAGGAATCCCTCCGGACCAG 4082777 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || ||||| | |||||||| ||||| ||||| | || ||||| || ||||| Sbjct 4082778 CAGAGGTTGATTTTTGCTGGGAAACAGCTTGAGGATGGCCGCACCTTGGCTGACTATAAC 4082837 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | || || | || || ||| Sbjct 4082838 ATTCAGAAAGAGTCTACCCTCCAC 4082861 Score = 98.7 bits (108), Expect = 4e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || ||||| || || || || ||||| || ||| ||| Sbjct 4329349 ATGCAAATCTTTGTGAAGACTCTTACTGGAAAGACCATCACCCTTGAGGTAGAAAGCTCT 4329408 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | || || ||||| |||||||| || |||||||||||||| Sbjct 4329409 GATACAATTGATAACGTGAAGGCGAAGATTCAGGATAAGGAGGGCATTCCTCCTGATCAG 4329468 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || ||||| || || ||||| | || |||| |||||||| Sbjct 4329469 CAGCGTCTCATCTTTGCCGGCAAACAGCTCGAGGATGGTCGCACGCTGGCTGATTATAAC 4329528 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | || || | ||||||||| Sbjct 4329529 ATCCAGAAAGAATCGACACTTCAC 4329552 Score = 91.5 bits (100), Expect = 6e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| || ||||| || || || || ||||| ||||| || Sbjct 4329121 ATGCAGATATTTGTGAAAACCCTCACTGGAAAGACAATCACACTTGAAGTTGAGAGCTCC 4329180 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | |||| ||||| ||||||||||| || ||||| || || || Sbjct 4329181 GACACTATTGACAATGTTAAGGCTAAAATCCAAGATAAGGAGGGGATTCCACCGGACCAG 4329240 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | ||||| | || || || ||||| ||||| | || | ||||| || ||| Sbjct 4329241 CAGCGCCTCATTTTTGCTGGTAAGCAGCTTGAGGATGGTCGCACCCTTGCGGACTACAAT 4329300 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | || ||||| Sbjct 4329301 ATTCAGAAGGAATCTACTCTTCA 4329323 Score = 89.7 bits (98), Expect = 2e-12 Identities = 109/147 (74%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 364661 TCAATTAGCAGGTTTTGTATCTGACCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAAT 364720 |||||| || |||| ||| ||||| | |||||| ||||| ||||| |||| | Sbjct 1523156 TCAATTTGCTGGTTATGTTTCTGAGCATTCAGCTTACCATCATGGTGAACAAAGTCTC-- 1523213 Query 364721 GGGAGCA--ATAATTGGAATGGCACAAAATTTTGTTGGAAGTAATAATGTAAATTTACTA 364778 | | || |||||||||||||| ||| |||| || ||||| |||||| | ||| | || Sbjct 1523214 GCCACCACTATAATTGGAATGGCTCAAGATTTCGTAGGAAGCAATAATATCAATCTTCTG 1523273 Query 364779 GAACCAAAAGGACAATTTGGAAGTCGA 364805 | ||||| || |||||||||| |||| Sbjct 1523274 CAGCCAAATGGTCAATTTGGAACTCGA 1523300 >seq2 Length=81761211 Score = 102 bits (112), Expect = 3e-16 Identities = 178/255 (70%), Gaps = 12/255 (5%) Strand=Plus/Plus Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399 ||||| ||||||||||| || |||| ||||| || ||||| ||| ||||| || | Sbjct 47322012 GCTTACTTCAATGATGCTCAGAGGCAGGCAACGAAGGATGCTGGAGTGATTGCAGGACTG 47322071 Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459 |||||| ||||||| |||||||| || || ||||| | || |||||||| | Sbjct 47322072 AATGTTGCCAGAATTATAAATGAACCAACTGCTGCTGCCATTGCTTATGGACTCG----- 47322126 Query 451460 TCAAAAGAAA-CAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGA 451518 | |||||| | || || || ||| | || || || ||||||| || || ||| Sbjct 47322127 --ATAAGAAAGGTGGGGAGAAGAACATTCTTGTCTTCGACCTTGGTGGTGGCACCTTTGA 47322184 Query 451519 TACTTCTGTA-CTT-TCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGAT 451576 | | | | ||| | ||||| |||| || |||||||| ||| || ||||| || Sbjct 47322185 T--GTGAGCATCTTGACCATTGATAATGGAGTTTTTGAAGTCTTGGCTACAAATGGCGAC 47322242 Query 451577 ACTCATCTAGGAGGT 451591 |||||||| |||||| Sbjct 47322243 ACTCATCTTGGAGGT 47322257 Score = 86.0 bits (94), Expect = 2e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| ||||||||||| ||||| | || ||||| || || ||| | ||| ||||| Sbjct 47321411 ATTGGGATTGATCTTGGCACCACGTACTCCTGTGTTGGCGTCTACAAGGGTGGTCATGTA 47321470 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGT 451023 ||||||||||||||||| ||||| || | |||||||| ||||| Sbjct 47321471 GAAATTATAGCAAATGATCAAGGTAACCGTATCACTCCTTCTTGGGT 47321517 >seq62680 Length=12704 Score = 93.3 bits (102), Expect = 2e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 || || ||||||||||| || ||| || |||| ||||| | | || || || Sbjct 9248 ACGAAGATGAAAGAAACTGCCGAAGCTTACCTTGGAAAATCAGTTTCAAAGGCCGTGATA 9189 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 |||||||||||||||||||||||||| || ||||| || || || ||||| || || Sbjct 9188 ACTGTTCCCGCTTATTTCAATGATGCTCAGCGGCAGGCGACGAAGGATGCCGGGAGAATC 9129 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 || || | |||| | | || || |||||||| || || |||||||| | ||||| Sbjct 9128 GCCGGCCTTGATGTCCAGAGGATCATCAATGAACCAACTGCTGCTGCTCTTTCTTATGG 9070 >seq876 Length=1913211 Score = 84.2 bits (92), Expect = 9e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || ||||| || || || || || || || || ||| Sbjct 666392 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGAGCTCT 666333 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || || || ||||||||||| || ||||| || ||||| Sbjct 666332 GACACCATCGACAACGTAAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCGGATCAG 666273 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || ||||| || ||||| |||| | || ||||||||| Sbjct 666272 CAGAGGCTGATCTTTGCCGGCAAGCAACTCGAGGATGGCCGAACCCTTGCTGATTATAAT 666213 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| | || |||||| Sbjct 666212 ATTCAAAAGGAGTCCACCCTTCAC 666189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1973450680299072