Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq277 260 1e-63 seq101 197 1e-44 seq140 113 3e-19 seq62680 109 4e-18 seq2 98.7 7e-15 seq203 93.3 3e-13 >seq277 Length=589295 Score = 260 bits (288), Expect = 1e-63 Identities = 716/1078 (66%), Gaps = 28/1078 (3%) Strand=Plus/Plus Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303 |||| |||||| | |||| ||||| ||||||||||| ||||| | || || || Sbjct 413258 GTTGTTTTATCCTCAGCAGAAACATTCAGAATACCATTAGCATCAATGTCGAAGCAAACA 413317 Query 517304 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 517363 ||| ||||| || || || |||||||||| || || | | |||| | || || Sbjct 413318 GTAATCTGAGGAACACCCCTGGGAGCAGGTGGTATGCCAGAGAGCTCAAATTTGCCGAGC 413377 Query 517364 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 517423 ||| || || | || | | ||||| || | | ||||| || ||| Sbjct 413378 AGATTGTTGTCCCTTGTTCTAGTCCTCTCACCTTCATATACCTGGATCAAGACACCAGGC 413437 Query 517424 TGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCT 517482 ||||| ||||| || || | || || ||| || || ||| || || ||||| || Sbjct 413438 TGATTGTCTGAGTAGGTCGAGAAGAC-CTGCTCCTTCTTGGTAGGGATGGTGGTGTTCCT 413496 Query 517483 ATCAAT-AATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGA 517541 ||| || | || |||| | |||||| || || || | ||||||||| |||||||| | Sbjct 413497 TGGAATCAAGACTG-TCATGACACCACCAGCAGTCTCGAGACCAAGAGAGAGAGGAGTCA 413555 Query 517542 CATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTT 517601 |||| | |||| | | |||| || || | | ||| | ||| || |||| Sbjct 413556 CATCGAGCAGGAGGAGGTCCTGAACCTTCTCGTTGCCCTCACCGCTCAAAATGGCAGCTT 413615 Query 517602 GAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTT 517659 | | ||| |||||||| |||||||| ||||| ||||| | | || || || | || Sbjct 413616 GGACAGCGGCACCATAGGCAACAGCCTCATCGGGATTGATGCTCTTGCAG--AGCTCCTT 413673 Query 517660 ACCATTGAAAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAA 517718 |||||||| || | || || | | || ||||| ||||| | || |||||||||| Sbjct 413674 CCCATTGAAGAAGTCCTGCAACA-GCTGCTGCACCTTTGGAATCCTAGTGGATCCTCCAA 413732 Query 517719 CTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCA 517777 | || || | ||||| || ||| | ||||||| |||| |||| || || || Sbjct 413733 CCAAAACCACATCATGAACA-GTGCTCTTATCCATCTTTGCATCCCTCAAGCACTTCTCC 413791 Query 517778 ACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTA 517837 || ||||| | | | || || | || ||| || ||||| | || | ||| Sbjct 413792 ACAGGTTCCATGCACTTCCTGAATAGATCCATGTTAAGCTCCTCGAACCTGGCACGAGTG 413851 Query 517838 AGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTC 517897 | ||| | ||||||| || ||| | | |||||||| ||| || || ||||||| Sbjct 413852 ATGGTGGTGTAGAAATCAATGCCCTCGTATAGAGAATCAATTTCGATGGTGGTTTGAGCA 413911 Query 517898 GAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTT 517956 | |||||||| | | || || | |||||| || ||||| | ||| | |||| ||| | Sbjct 413912 GTCGAAGATAGAGTTCTCTTTGCTCTTTCACAAGCAGTCCTCAATCTCC-TAAGAGCTCT 413970 Query 517957 TGCTGATTGATTC--AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT 518014 | ||||| | | | |||| | |||| ||| ||||| || || | |||| | | Sbjct 413971 GG--GATTGTTGCTGATATCTTTCTTATTTTTCCTCTTAAATTCCTGAACAAAGTGGTTA 414028 Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || | ||||| |||||||| ||||| || | | ||| | ||||| || || | ||| Sbjct 414029 ACCATGCGATTGTCAAAATCCTCACCACCAAGATGAGTGTCTCCTGCAGTTGCCTTGACT 414088 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | |||| || ||||| | | | |||| ||||| || ||||| |||| || Sbjct 414089 TCAAAAATACCCTCTTCGATGGTGAGGAGAGAGACATCGAAAGTCCCACCGCCCAAGTCG 414148 Query 518135 AAAATAAGTACATTCATTTCTT---TGTCTTGG-----TTTTTATCAAGACCATACGCAA 518186 ||||| || ||||| ||||| | ||| ||||| ||||| ||||| || | Sbjct 414149 AAAATGAGAACATT--TTTCTCACCTACGCTGGAAGCCTTTTTGTCAAGGCCATAGGCGA 414206 Query 518187 AAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTG 518246 ||||||||||| || ||||| || ||||||| |||||||||||| ||||| || | Sbjct 414207 TGGCAGCAGCAGTCGGCTCATTGATTATTCTCATAACATTAAGACCGGCAATGACACCAG 414266 Query 518247 CATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 |||| || |||||||| | || || || || || ||||| |||||||| | ||| || Sbjct 414267 CATCCTTTGTGGCTTGGCGCTGCGAGTCATTGAAGTATGCGGGAACAGTGACAACAGC 414324 Score = 96.9 bits (106), Expect = 3e-14 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||| | || ||| | ||||| || || | |||| ||||| ||||| || ||||| Sbjct 420111 CAAAGACGGTGTTGATGGGATTCATAGCGACCTGATTCTTGGCAGCATCGCCGATCAGCC 420170 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || || || || || | |||||| || || || || || |||||||| || || || | Sbjct 420171 GCTCGGTGTCGGTGAACGCAACATACGACGGGGTCGTACGGTTACCTTGGTCGTTTGCGA 420230 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | ||||| || | | | |||||||| || || ||| | ||||| |||| ||||| Sbjct 420231 TGATTTCGACCCGATCGTGCTGCCATACTCCGACGCAAGAGTACGTTGTACCTAGATCAA 420290 Query 518703 TACCAATAGCA 518713 ||||||| ||| Sbjct 420291 TACCAATCGCA 420301 >seq101 Length=418085 Score = 197 bits (218), Expect = 1e-44 Identities = 545/824 (66%), Gaps = 30/824 (4%) Strand=Plus/Plus Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| | |||||| || || || || || |||||||| || || || || | | | | Sbjct 197862 GTCATGACACCACCAGCAGTCTCCAAGCCTAGAGAAAGCGGGGTTACGTCCAGCAATAGA 197921 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | || || | || |||| || || |||||||||||||| | ||||||||| Sbjct 197922 AGATCCTGCACCTTCTCATTGCCTTCCCCGCTCAGAATAGCTGCTTGGACTGCAGCACCA 197981 Query 517616 TATGCAACAGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 517673 || |||||||| ||||| ||||||| | || || || | || |||||||| |||| Sbjct 197982 TAAGCAACAGCCTCATCCGGATTAATGCTCTTGCAG--AGCTCCTTTCCATTGAAGAAAT 198039 Query 517674 TTGAAAGAAGTTGTCTTA-CCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 517732 | ||| | || || | || ||||||| || | ||||| |||| ||| Sbjct 198040 CTTGAAGCAACTG-CTGATCCCTAGGAATTCGGGTGGATCC----------ACAACATCA 198088 Query 517733 TGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791 || || | | | || || | || | ||| | || || || || || | || Sbjct 198089 TGGACG-GAGCTCTTGTCTATCTTGGCATCGCGGAGGCACTTCTCCACAGGCTCCATACA 198147 Query 517792 CGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 517851 | ||| || | || || || |||||| |||| | ||| | || || | Sbjct 198148 CTTTCTGAATAGATCCATGTTGAGCTCCTCGAATCTAGCACGAGTGATTGTAGAATAGAA 198207 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 ||| |||||||| || | |||||||| ||||| || || || | | || |||| | Sbjct 198208 ATCGATTCCTTCAAAGAGAGAATCAATCTCAATGGTCGTCTGTGCAGTTGATGATAAAGT 198267 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTG--ATT 517968 || || || | || || | || || | | || |||| || ||| |||| | | Sbjct 198268 CCGCTTTGCTCTCTCGCAAGAGGTTCTCAAGCGTC-TAAGAGCCCTTG--GATTTCCACT 198324 Query 517969 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 518028 | ||| |||| | ||| |||||||| |||| |||| | | || | | ||||| Sbjct 198325 GATATCCTTTTTGTGTTTCCTCTTGAACTCTTGAACAAAGTGGCTGACCAACCTGTTATC 198384 Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088 ||||||||||||||| | | ||| | || | ||| || | || | || | || || Sbjct 198385 AAAATCTTCACCTCCAAGATGAGTGTCACCGGCCGTGGCCTTGACCTCAAAGATGCCTTC 198444 Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 ||| | | | ||||| |||||| |||||| ||||| | ||| |||||||| ||||| Sbjct 198445 TTCGATGGTGAGAAGAGAGACATCAAAGGTTCCGCCACCAAGATCGAAAATAAGAACATT 198504 Query 518149 CATTTCTTTGTCTT----GG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 518202 | | || | || |||||||| |||||||| || | ||||| ||||| || Sbjct 198505 CTTCTCGCCCACGCTAGAGGACTTTTTATCGAGACCATAGGCGATGGCAGCGGCAGTAGG 198564 Query 518203 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 518262 ||||| ||||| | || |||||||||||||| || || ||||| || |||||||| Sbjct 198565 CTCATTGATAATGCGCATGACATTAAGACCAGCGATAACCCCAGCATCCTTGGTGGCTTG 198624 Query 518263 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306 | ||||||||||| || || || |||||||||| ||| |||| Sbjct 198625 GCGCTGTGAATCGTTGAAGTAAGCGGGAACAGTAACAACAGCAT 198668 >seq140 Length=1825301 Score = 113 bits (124), Expect = 3e-19 Identities = 128/172 (74%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248 || |||||||| || ||||| || || | | ||||| | |||||||||||||| ||| Sbjct 676319 GCCGCAGCAGTCGGCTCATTGATGATCCGGAGAACATCCAATCCAGCAATTCTTCCAGCA 676378 Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCA 518308 ||||| || || |||| || | ||| |||||||| |||||||| || || ||||| | Sbjct 676379 TCTTTTGTCGCCTGTCGCTGCGCATCATTAAAATAAGCAGGAACGGTGATCACGGCTTTT 676438 Query 518309 GTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAA 518360 | ||| |||||||| |||||| || |||| |||||| || ||| || Sbjct 676439 GAAACTGATTTACCAAGATAAGCCTCAGCGGTTTCTTTCATCTTGGTTAGAA 676490 >seq62680 Length=12704 Score = 109 bits (120), Expect = 4e-18 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| | || ||||||||||||||||||||| || || ||| |||| ||| || || Sbjct 9070 CCATAAGAAAGAGCAGCAGCAGTTGGTTCATTGATGATCCTCTGGACATCAAGGCCGGCG 9129 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||||| || ||||| || || || || | || | ||| || ||||| || |||||||| Sbjct 9130 ATTCTCCCGGCATCCTTCGTCGCCTGCCGCTGAGCATCATTGAAATAAGCGGGAACAGTT 9189 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTT 518356 || ||||| | | ||| ||| |||| ||||| || |||| |||||| || | Sbjct 9190 ATCACGGCCTTTGAAACTGATTTTCCAAGGTAAGCTTCGGCAGTTTCTTTCATCTTCGTC 9249 Query 518357 AAAAT 518361 ||||| Sbjct 9250 AAAAT 9254 >seq2 Length=81761211 Score = 98.7 bits (108), Expect = 7e-15 Identities = 151/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 518072 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATA 518131 |||| |||| ||||| |||| | ||| | | |||||| ||| |||||||| | Sbjct 47322223 ACTTCAAAAACTCCATTATCAATGGTCAAGATGCTCACATCAAAGGTGCCACCACCAAGG 47322164 Query 518132 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 518191 || || | ||| | ||| | || ||| | ||||| || ||||| |||| ||| Sbjct 47322163 TCGAAGACAAGAATGTTCTTCTCCCCACCTT---TCTTATCGAGTCCATAAGCAATGGCA 47322107 Query 518192 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 518251 ||||||||||||||||| |||||||| |||||| || || ||||| ||| ||||| Sbjct 47322106 GCAGCAGTTGGTTCATTTATAATTCTGGCAACATTCAGTCCTGCAATCACTCCAGCATCC 47322047 Query 518252 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 518286 || || || || || || | ||| || || || || Sbjct 47322046 TTCGTTGCCTGCCTCTGAGCATCATTGAAGTAAGC 47322012 >seq203 Length=2940243 Score = 93.3 bits (102), Expect = 3e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 870803 GTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACT 870862 ||||||| |||||||| |||||||| |||||||||||| |||| || |||||||| || Sbjct 34787 GTCGATTTCTCTTCTCCTAATATTGCCAAAGAAATGCATGTTGGCCACTTAAGATCCACA 34846 Query 870863 ATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATT 870922 |||||||| || | ||| | | | || ||| | | || |||| ||| Sbjct 34847 ATTATTGGGGACACGCTTTCTCGAATGTTGGAATTTTCAAATGTTGAGGTTTTTCGACGA 34906 Query 870923 AATCATGTGGGTGATTGGGGAACTCA 870948 || ||||| ||||||||||||||||| Sbjct 34907 AACCATGTTGGTGATTGGGGAACTCA 34932 Score = 93.3 bits (102), Expect = 3e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 870803 GTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACT 870862 ||||||| |||||||| |||||||| |||||||||||| |||| || |||||||| || Sbjct 99458 GTCGATTTCTCTTCTCCCAATATTGCCAAAGAAATGCATGTTGGCCACTTAAGATCTACA 99517 Query 870863 ATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATT 870922 |||||||| || | ||| | | | || ||| | | || |||| ||| Sbjct 99518 ATTATTGGGGACACACTTTCTCGAATGTTGGAATTTTCAAATGTTGAGGTTTTTCGACGA 99577 Query 870923 AATCATGTGGGTGATTGGGGAACTCA 870948 || ||||| ||||||||||||||||| Sbjct 99578 AACCATGTTGGTGATTGGGGAACTCA 99603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3776376946830304