Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq2 174 2e-38
seq293 150 2e-31
seq36 145 9e-30
seq91 98.7 1e-15
>seq2
Length=81761211
Score = 174 bits (192), Expect = 2e-38
Identities = 245/337 (73%), Gaps = 8/337 (2%)
Strand=Plus/Plus
Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGT--TTCGTTATCA 15974
||| ||||| || |||| || || || || | || | |||||||| ||| || ||
Sbjct 31018737 ATCCAGGATGTCTGCGCGGTTAGTAGCTGCAAGAACTATGATACCTGTATTTCCTT--CA 31018794
Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034
||||||||||| || |||||||||||||| | ||||||||| | |||||||||| |
Sbjct 31018795 AAACCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCATTCCCCCCT 31018854
Query 16035 ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094
| ||| | | |||||| |||| || |||||||| ||||||| ||| || || ||
Sbjct 31018855 CCAATACCCGTTCCTCGTTGCCTTCCAACAGCATCAATTTCATCAACGAATACAATACAA 31018914
Query 16095 GGTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 16153
||| ||| || || | ||| ||| ||||| || || || |||||| ||||||||
Sbjct 31018915 GGTGCATTCTCTTTAGCCTTCTTGAAA-AGATCACGAACCCGTGAGGCGCCAACACCAAC 31018973
Query 16154 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 16212
||||||||||||||| | | | | | || | || ||||| ||| || |||||| |
Sbjct 31018974 AAACATCTCCACAAACTCAGATCCTG-AGATAGAGAAAAAGGGAACACCAGCTTCACCAG 31019032
Query 16213 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249
||||||| ||| || |||||||| || ||||| ||
Sbjct 31019033 CAATGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGG 31019069
>seq293
Length=413263
Score = 150 bits (166), Expect = 2e-31
Identities = 130/161 (81%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230
|| ||||||||||| | |||| |||||||| || || ||||| |||||||| || |
Sbjct 226934 TCATTTGCTGAGCGGATTCTCGCTTTTGCGTGCGTCGAAGGTATTTTCTTCTCCGGCAGC 226993
Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290
|||||||| || | |||||||||||||| ||| | |||||||||||| || || |||
Sbjct 226994 TTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCTCACTTTTTCTAAC 227053
Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||| |||||||||||||||||||||||| || |||||
Sbjct 227054 GAGCTCATCTCTCGTGACGAGGGACTCCACTGCGACTTTGC 227094
>seq36
Length=6822877
Score = 145 bits (160), Expect = 9e-30
Identities = 130/163 (80%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229
||| ||||| |||||| | | |||||||| || |||||||| |||||||||||||||
Sbjct 1783767 TTCTTTTGCAGAGCGAATTCTTGCATTTGCTTGCGTTGAGGGCATCTTCTTCTCTGGTAG 1783708
Query 102230 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 102289
|||||||| || | ||||| |||||| |||| || ||||| |||||| || |||||
Sbjct 1783707 TTTCTGCGCCATCTTCTGGCTGAAGAAGAGAGGGCTAATGCCTGGTCTCACTTTTTCCAA 1783648
Query 102290 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 102332
||||||||| |||||||| ||||| || ||| || ||||||
Sbjct 1783647 CGAGCTTATTTCTCGTGATGAGGGCCTGCACTGTGACTTTGCG 1783605
>seq91
Length=344896
Score = 98.7 bits (108), Expect = 1e-15
Identities = 246/368 (67%), Gaps = 12/368 (3%)
Strand=Plus/Minus
Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 16031
||| ||||||||||| ||||| ||||| ||||| || ||||| | |||||||| | |
Sbjct 231907 AAATCCATCCATCTCAGTCAAGAGCTGATTAATGGTCTGTTCTCTCTCATCATTACCACC 231848
Query 16032 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091
|| | ||||| | | ||| |||| || ||||||||||| ||||| || || ||
Sbjct 231847 ACCAAGC--CCAGCCCCTCTCTGCCTTCCAACCGCATCAATCTCGTCAATAAAAACAATA 231790
Query 16092 CATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTG--GCGCCCAC 16147
|| || |||||| | || ||||| | ||||| ||| |||| || || ||
Sbjct 231789 CAGGG--AGCTTTCGCCTTTGCCTTCTCAAACAAATCCC--TCACCCTTGAAGCTCCAAC 231734
Query 16148 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 16207
|||||||| | || ||||| | || || | ||| | |||||| ||| || ||
Sbjct 231733 TCCAACAAAAAGTTCAACAAACTCTGAAGCAGCACACGAAAAGAAGGGCACACCAGCCTC 231674
Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267
|| || | || || || || || ||||| || || || ||| || | | |||
Sbjct 231673 GCCGGCGACCGCCCGAGCTAGCAGCGTCTTCCCAGTTCCCGGCGGCCCAACCAAAAGGCA 231614
Query 16268 ACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 16327
|||| |||||||| || ||| | |||| | ||||| | ||| | |||||| ||
Sbjct 231613 ACCTTTGGGAATCTTAGCACCAAGAGCCGTGTATTTATCAGGATTCTTCAAAAAATCGAC 231554
Query 16328 AATCTCTT 16335
| ||||
Sbjct 231553 GACTTCTT 231546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620047292660480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |