Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq36 129 7e-25 seq293 107 2e-18 >seq36 Length=6822877 Score = 129 bits (142), Expect = 7e-25 Identities = 173/236 (73%), Gaps = 10/236 (4%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGT----CCAGGCATGAG 119563 || || || ||||| ||||| || ||||| || ||| ||||| |||||||| || Sbjct 1783618 TGCAGGCCCTCATCACGAGAAATAAGCTCGTTG--GAA--AAAGTGAGACCAGGCATTAG 1783673 Query 119564 TCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCAC 119623 ||||| ||||| ||||| |||||||| || ||||| ||||| |||||||||||||| || Sbjct 1783674 CCCTCTCTTCTTCAGCCAGAAGATGGCGCAGAAACTACCAGAGAAGAAGATGCCCTCAAC 1783733 Query 119624 ACAGGCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTCGAACCACTTGAGAG 119682 || || || || | | ||||| ||||||| ||| || ||||| ||| ||||| Sbjct 1783734 GCAAGCAAATGCAAGAATTCGCTCTGCAAAAGAATCG-GAGGCGTCGATCCAGCGGAGAG 1783792 Query 119683 CCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGC 119738 |||| | ||||| || | | |||||| || || | ||| || | ||| || ||| Sbjct 1783793 CCCACTGTGCCTTGCGGGCGACGCAGGGAACGGTCTCGATAGCATGGAAGAGGTGC 1783848 >seq293 Length=413263 Score = 107 bits (118), Expect = 2e-18 Identities = 164/230 (71%), Gaps = 9/230 (4%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGT----CCAGGCATGAG 119563 || || || || || |||||||||||||| ||| ||| ||||| || ||||| | Sbjct 227082 TGGAGTCCCTCGTCACGAGAGATGAGCTCGTTA--GAA--AAAGTGAGACCTGGCATCAA 227027 Query 119564 TCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCAC 119623 || | ||||| ||||| |||||||| || || || || || ||||| || || || || Sbjct 227026 ACCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGCCGGAGAAGAAAATACCTTCGAC 226967 Query 119624 ACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCACTTGAGAGC 119683 || || ||||||| | ||||||||||| | | ||| ||| | ||| || || Sbjct 226966 GCACGCAAAAGCGAGAATCCGCTCAGCAAATGATTCAGAGGCGTCAATCCAGCGCAGTGC 226907 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAA 119733 ||| | |||||||| | | |||||| || |||| |||||| |||||| Sbjct 226906 CCACTGAGCCTTACGGGCGACGCAGGGTACGGTTTCGATGGC-GCGAAAA 226858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588316464675200