Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_015287.1
Length=232878
Score E
Sequences producing significant alignments: (Bits) Value
seq89584 486 3e-132
seq2 194 2e-44
seq374 190 3e-43
seq64191 159 5e-34
>seq89584
Length=148959
Score = 486 bits (538), Expect = 3e-132
Identities = 695/979 (71%), Gaps = 0/979 (0%)
Strand=Plus/Minus
Query 215303 TGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCT 215362
||| |||| |||||| || ||| | ||| | || ||||||||||| | ||||| |||
Sbjct 1128 TGGATTACCAGTACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCT 1069
Query 215363 TGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGAT 215422
| | | || || || || ||| | || ||||| ||||| ||||| ||||||
Sbjct 1068 ACTTTATTGACCGCAACTTCTGTATTTATCATTGCCTTCATTGCTGCCCCTCCAGTCGAT 1009
Query 215423 ATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCT 215482
|| || || || | || || ||| |||| ||| || | ||||| ||||| || |||||
Sbjct 1008 ATTGATGGTATTCGTGAACCTGTTTCTGGGTCTCTACTTTATGGAAACAATATTATCTCA 949
Query 215483 GGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCA 215542
||||| || | |||| ||| || || || || || || ||||| || |||||||||
Sbjct 948 GGTGCCATTATTCCTACTTCCGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGCA 889
Query 215543 GCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTC 215602
||| | ||||| || ||| | |||||||| || |||| |||| || | | |||||
Sbjct 888 GCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTTATTGTTCTACACTTT 829
Query 215603 CTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATG 215662
| ||||| | || ||| || | ||||||||||| || | | | ||||||
Sbjct 828 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 769
Query 215663 AGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTT 215722
| |||||||| |||||| || || || ||||| | ||||| || || ||| |
Sbjct 768 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACAGCTGTTTTCTTG 709
Query 215723 GTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACA 215782
| || || | ||||| || ||||||||||| |||||| | ||||| ||||| ||
Sbjct 708 ATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACT 649
Query 215783 TTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATG 215842
||||||| |||| |||| |||||||| |||||||||||||| ||||| ||||| ||||||
Sbjct 648 TTCAACTTCATGATTGTATTCCAGGCAGAGCACAACATTCTTATGCATCCATTTCACATG 589
Query 215843 TTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTT 215902
||||| || |||||||| ||||| ||||| | ||| ||| ||||| ||||| | ||
Sbjct 588 TTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTA 529
Query 215903 ACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTC 215962
|| ||| | ||||||| || || ||||| | || ||| || | ||||||| ||
Sbjct 528 ACTTCTAGTTTAATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAGATTT 469
Query 215963 GGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATC 216022
|| |||||||| ||||| || || || ||||| || || ||||| ||||| || | |||
Sbjct 468 GGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATC 409
Query 216023 TTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCT 216082
|||||||| || ||||||||| || | | || |||||| | || || | |||
Sbjct 408 TTCCAATATGCTAGTTTCAACAATTCCCGTTCCTTGCATTTCTTCTTGGCTGCTTGGCCT 349
Query 216083 GTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGT 216142
|| | |||||||| ||||| ||||| | ||||||||||||||| | ||||||
Sbjct 348 GTAGTGGGTATCTGGTTCACTGCTTTGGGTATTAGTACTATGGCGTTCAACTTGAACGGT 289
Query 216143 TTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGAC 216202
|| || || ||||| || || || || ||| |||||| |||||||| ||
Sbjct 288 TTTAATTTTAACCAATCCGTAGTTGATAGCCAAGGTCGTGTTATTAACACTTGGGCTGAT 229
Query 216203 GTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTC 216262
| | || | || |||||||||||||||||||| || ||||| || |||||||||
Sbjct 228 ATCATAAATCGTGCTAATCTTGGTATGGAAGTAATGCATGAACGTAATGCACACAACTTC 169
Query 216263 CCATTAGACTTGGCTGCTG 216281
|| |||| | ||| |||
Sbjct 168 CCTCTAGATCTAGCTTCTG 150
>seq2
Length=81761211
Score = 194 bits (214), Expect = 2e-44
Identities = 295/420 (70%), Gaps = 0/420 (0%)
Strand=Plus/Plus
Query 215862 TCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAG 215921
|||| ||||| | ||| ||| ||||| ||||| | || || ||| | ||||||| |
Sbjct 48005766 TCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTAATCAGGG 48005825
Query 215922 AGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACAT 215981
| || ||||| | || ||| || | ||||||| || || |||||||| ||||| |
Sbjct 48005826 AAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCT 48005885
Query 215982 ACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCA 216041
| || || ||||| || || ||||| ||||| || | ||||||||||| || |||||
Sbjct 48005886 ATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCA 48005945
Query 216042 ACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAA 216101
|||| || | | || |||||| | || || | ||||| | |||||||| |
Sbjct 48005946 ACAATTCCCGTTCCTTGCATTTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGGTTCA 48006005
Query 216102 CTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTG 216161
|||| ||||| | ||||||||||||||| | |||||||| || || ||||| || |
Sbjct 48006006 CTGCTTTGGGTATTAGTACTATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAATCCG 48006065
Query 216162 TCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGAC 216221
| || || ||| |||||| |||||||| || | | || | || |
Sbjct 48006066 TAGTTGATAGCCAAGGTCGTGTTATTAACACTTGGGCTGATATCATAAATCGTGCTAATC 48006125
Query 216222 TTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTGGCTGCTG 216281
||||||||||||||||||| || ||||| || ||||||||||| |||| | ||| |||
Sbjct 48006126 TTGGTATGGAAGTAATGCATGAACGTAATGCACACAACTTCCCTCTAGATCTAGCTTCTG 48006185
>seq374
Length=1248919
Score = 190 bits (210), Expect = 3e-43
Identities = 293/418 (70%), Gaps = 0/418 (0%)
Strand=Plus/Plus
Query 215864 GGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAG 215923
|| ||||| | ||| ||| ||||| ||||| | || || ||| | ||||||| ||
Sbjct 600774 GGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTAATCAGGGAA 600833
Query 215924 ACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATAC 215983
|| ||||| | || ||| || | ||||||| || || |||||||| ||||| ||
Sbjct 600834 ACCACTGAAAATGAGTCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTAT 600893
Query 215984 AACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAAC 216043
|| || ||||| || || ||||| ||||| || | ||||||||||| || |||||||
Sbjct 600894 AATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAAC 600953
Query 216044 AACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACT 216103
|| || | | || |||||| | || || | ||||| | |||||||| |||
Sbjct 600954 AATTCCCGTTCCTTGCATTTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGGTTCACT 601013
Query 216104 GCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTC 216163
|| ||||| | ||||||||||||||| | |||||||| || || ||||| || ||
Sbjct 601014 GCTTTGGGTATTAGTACTATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAATCCGTA 601073
Query 216164 GTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTT 216223
|| || ||| |||||| |||||||| || | | || | || |||
Sbjct 601074 GTTGATAGCCAAGGTCGTGTTATTAACACTTGGGCTGATATCATAAATCGTGCTAATCTT 601133
Query 216224 GGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTGGCTGCTG 216281
||||||||||||||||| || ||||| || ||||||||||| |||| | ||| |||
Sbjct 601134 GGTATGGAAGTAATGCATGAACGTAATGCACACAACTTCCCTCTAGATCTAGCTTCTG 601191
>seq64191
Length=168564
Score = 159 bits (176), Expect = 5e-34
Identities = 298/435 (69%), Gaps = 2/435 (0%)
Strand=Plus/Plus
Query 215387 TTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTT 215446
|| ||| | || ||||| ||||| |||| | |||||| || || || | || || |||
Sbjct 58649 TTTATCATTGCCTTCATTGCTGCCTCTCCAGCCGATATTGATGGTATTCGTGAACCTGTT 58708
Query 215447 GCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTACCTAGTTCAAAC 215506
|||| ||| || | ||||| ||||| || ||||| ||| || | |||| |||
Sbjct 58709 TCTGGGTCTCTACTTTATGGAAACAATATTATCTCAAGTGTCATTATTCCTACTTCCGCA 58768
Query 215507 GCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 215566
|| || || || || || ||||| || ||||||| || | | ||||| || ||| | |||
Sbjct 58769 GCTATAGGTTTGCATTTTTACCCAATATGGGAAGTAGAATCTGTTGATGAGTGGTTATAC 58828
Query 215567 AATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATTTCTGCATACTGC 215626
|| || |||| |||| || | | |||| | ||||| | || |||
Sbjct 58829 AACAACGGTCCTTATGAACTTATTGTTCTATACTTTTTACTTGGTGTAGCTTGTTACATG 58888
Query 215627 GGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTAC 215686
|| | ||||||||||| || | | | |||||| | |||||||| |||||| ||
Sbjct 58889 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGTGCCCTTGGATTGCTGTTGCATAT 58948
Query 215687 TCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTG-TGTATCCATTCGGTCAGGGTTC 215745
|| || ||||| | ||||| | || || |||| | || || | || || ||
Sbjct 58949 TCAGCTCCTGTTGCGGCTGCTACAACTGT-TTACTTGATCTACCCTATTGGCCAAGGAAG 59007
Query 215746 TTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCA 215805
||||||||||| |||||| | ||||| ||||| | ||||||| |||| |||| | |||
Sbjct 59008 TTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAATTTCAACTTCATGATTGTATGCCA 59067
Query 215806 GGCTGAGCACAACAT 215820
| | |||||||||||
Sbjct 59068 GTCAGAGCACAACAT 59082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 744247257624320
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