Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq89584 511 6e-140 seq374 215 6e-51 seq2 215 6e-51 seq64191 187 3e-42 >seq89584 Length=148959 Score = 511 bits (566), Expect = 6e-140 Identities = 694/968 (72%), Gaps = 0/968 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| | || || || | ||||| | || | || ||||| ||||| ||||||||||| Sbjct 1128 TGGATTACCAGTACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCT 1069 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 | |||| | ||| | | |||||| |||| ||||| || || || || || || Sbjct 1068 ACTTTATTGACCGCAACTTCTGTATTTATCATTGCCTTCATTGCTGCCCCTCCAGTCGAT 1009 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | |||||||| | || || | | ||||| ||||| || ||||| Sbjct 1008 ATTGATGGTATTCGTGAACCTGTTTCTGGGTCTCTACTTTATGGAAACAATATTATCTCA 949 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || || ||| | || || || || || ||||||||| Sbjct 948 GGTGCCATTATTCCTACTTCCGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGCA 889 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| || | ||||||||||| || || || ||||||||| || | || | | ||||| Sbjct 888 GCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTTATTGTTCTACACTTT 829 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || ||||||||| | |||||||||| | |||| | |||||| Sbjct 828 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 769 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| ||| |||||||| ||||| || | || || ||||| ||||| Sbjct 768 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACAGCTGTTTTCTTG 709 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || ||| | ||||| ||| |||||| || || |||||| |||| || || ||||| Sbjct 708 ATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACT 649 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||||||| | |||||||| ||||||||||||||||||||||| ||||| || ||| Sbjct 648 TTCAACTTCATGATTGTATTCCAGGCAGAGCACAACATTCTTATGCATCCATTTCACATG 589 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || ||| || ||||| ||||| | ||| Sbjct 588 TTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTA 529 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | ||||||| || || || || || ||||| || | || |||| ||| Sbjct 528 ACTTCTAGTTTAATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAGATTT 469 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| |||||||| || || ||||| || || ||||| || ||||| || | ||| Sbjct 468 GGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATC 409 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || |||||| ||| | || |||||| | ||| | | ||| Sbjct 408 TTCCAATATGCTAGTTTCAACAATTCCCGTTCCTTGCATTTCTTCTTGGCTGCTTGGCCT 349 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 ||||| | |||||||| ||| | |||||||| | || ||||| || ||| | || || Sbjct 348 GTAGTGGGTATCTGGTTCACTGCTTTGGGTATTAGTACTATGGCGTTCAACTTGAACGGT 289 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 ||||| || ||||| || | || ||| | ||| || || || ||||| || Sbjct 288 TTTAATTTTAACCAATCCGTAGTTGATAGCCAAGGTCGTGTTATTAACACTTGGGCTGAT 229 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 | | || | || || || |||||||||||||||||||| |||||||||||||||||| Sbjct 228 ATCATAAATCGTGCTAATCTTGGTATGGAAGTAATGCATGAACGTAATGCACACAACTTC 169 Query 170659 CCACTTGA 170666 || || || Sbjct 168 CCTCTAGA 161 >seq374 Length=1248919 Score = 215 bits (238), Expect = 6e-51 Identities = 281/389 (72%), Gaps = 0/389 (0%) Strand=Plus/Plus Query 170278 GCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCA 170337 || ||||| ||||| | ||||| ||| | ||||||| || || || || || ||||| Sbjct 600792 GCTATGCATGGTTCTTTGGTAACTTCTAGTTTAATCAGGGAAACCACTGAAAATGAGTCT 600851 Query 170338 CAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACAT 170397 || | || |||| ||| || ||||| |||||||| || || ||||| || || ||| Sbjct 600852 GCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCAT 600911 Query 170398 GGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCAC 170457 || || ||||| || | ||||||||||||||||| || |||||| ||| | || Sbjct 600912 GGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCCCGTTCCTTGCAT 600971 Query 170458 TTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACA 170517 |||||| | ||| | | |||||||| | |||||||| ||| | |||||||| | || Sbjct 600972 TTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTGGGTATTAGTACT 601031 Query 170518 ATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAA 170577 ||||| || ||| | || || ||||| || ||||| || | || ||| | ||| Sbjct 601032 ATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAATCCGTAGTTGATAGCCAAGGTCGT 601091 Query 170578 GTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCAT 170637 || || || ||||| || | | || | || || || |||||||||||||||||| Sbjct 601092 GTTATTAACACTTGGGCTGATATCATAAATCGTGCTAATCTTGGTATGGAAGTAATGCAT 601151 Query 170638 GAGCGTAATGCACACAACTTCCCACTTGA 170666 || |||||||||||||||||||| || || Sbjct 601152 GAACGTAATGCACACAACTTCCCTCTAGA 601180 >seq2 Length=81761211 Score = 215 bits (238), Expect = 6e-51 Identities = 281/389 (72%), Gaps = 0/389 (0%) Strand=Plus/Plus Query 170278 GCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCA 170337 || ||||| ||||| | ||||| ||| | ||||||| || || || || || ||||| Sbjct 48005786 GCTATGCATGGTTCTTTGGTAACTTCTAGTTTAATCAGGGAAACCACTGAAAATGAGTCT 48005845 Query 170338 CAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACAT 170397 || | || |||| ||| || ||||| |||||||| || || ||||| || || ||| Sbjct 48005846 GCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCAT 48005905 Query 170398 GGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCAC 170457 || || ||||| || | ||||||||||||||||| || |||||| ||| | || Sbjct 48005906 GGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCCCGTTCCTTGCAT 48005965 Query 170458 TTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACA 170517 |||||| | ||| | | |||||||| | |||||||| ||| | |||||||| | || Sbjct 48005966 TTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTGGGTATTAGTACT 48006025 Query 170518 ATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAA 170577 ||||| || ||| | || || ||||| || ||||| || | || ||| | ||| Sbjct 48006026 ATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAATCCGTAGTTGATAGCCAAGGTCGT 48006085 Query 170578 GTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCAT 170637 || || || ||||| || | | || | || || || |||||||||||||||||| Sbjct 48006086 GTTATTAACACTTGGGCTGATATCATAAATCGTGCTAATCTTGGTATGGAAGTAATGCAT 48006145 Query 170638 GAGCGTAATGCACACAACTTCCCACTTGA 170666 || |||||||||||||||||||| || || Sbjct 48006146 GAACGTAATGCACACAACTTCCCTCTAGA 48006174 Score = 86.0 bits (94), Expect = 7e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 169927 ATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTT 169986 || ||||||||| || || | ||||||||||| || || || ||||||||| || | || Sbjct 22128489 ATATGGGAAGCAACATCTATTGATGAGTGGTTATACAATGGCGGTCCTTATGAAATTATT 22128548 Query 169987 ATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATAC 170046 | | ||||| | || || | || ||||||||| | |||||||||| | | Sbjct 22128549 GTTCTACACTTTTTAATTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTC 22128608 Query 170047 CGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGT 170093 | | ||||||| |||||||| ||| |||||||| ||||| || Sbjct 22128609 CATCAGGGTATGCACCCTTGGATTGTTGTTGCATATTCAGCTCCTGT 22128655 >seq64191 Length=168564 Score = 187 bits (206), Expect = 3e-42 Identities = 347/507 (68%), Gaps = 2/507 (0%) Strand=Plus/Plus Query 169711 ACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCATGTCTATTAGCA 169770 || || ||||| | || | || || || ||| | ||||||||||| | |||| | Sbjct 58577 ACCAAAAACCGTCTTTACATCGGATGATTTGGTATTTTGATGATCCCTACTTTATTGACC 58636 Query 169771 GCAGCAACCTGC-TTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAAT 169829 ||| | ||| |||||| |||| ||||| || || | || | || || ||||| || Sbjct 58637 GCAACTTA-TGCATTTATCATTGCCTTCATTGCTGCCTCTCCAGCCGATATTGATGGTAT 58695 Query 169830 CAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGT 169889 | |||||||| | || || | | ||||| ||||| || ||||| ||| || | Sbjct 58696 TCGTGAACCTGTTTCTGGGTCTCTACTTTATGGAAACAATATTATCTCAAGTGTCATTAT 58755 Query 169890 TCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTAGA 169949 ||| |||| || || ||| | || || || || || ||||||| || | || | || Sbjct 58756 TCCTACTTCCGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGTAGAATCTGTTGA 58815 Query 169950 TGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAAT 170009 ||||||||| || ||| ||||||||| || | || | | |||| | | || | Sbjct 58816 TGAGTGGTTATACAACAACGGTCCTTATGAACTTATTGTTCTATACTTTTTACTTGGTGT 58875 Query 170010 CTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGAT 170069 || ||||||||| | |||||||||| | |||| | |||||| | |||||||| Sbjct 58876 AGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGTGCCCTTGGAT 58935 Query 170070 CTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTT 170129 ||| |||||||| ||||| || | || || |||| | ||| | || ||| | Sbjct 58936 TGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACAACTGTTTACTTGATCTACCCTAT 58995 Query 170130 CGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCAT 170189 || || ||| |||||| || || |||||| |||| || || |||| || |||||||| Sbjct 58996 TGGCCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAATTTCAACTTCAT 59055 Query 170190 GTTCGTATTCCAAGCAGAGCACAACAT 170216 | | |||| ||| ||||||||||||| Sbjct 59056 GATTGTATGCCAGTCAGAGCACAACAT 59082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582195326809600