Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq876 109 4e-19
seq202 109 4e-19
seq2 104 2e-17
seq640 91.5 1e-13
>seq876
Length=1913211
Score = 109 bits (120), Expect = 4e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||||| || ||| |||||||| || ||||| | ||| | || |||| |||
Sbjct 665728 ACCAGGTGAAGAGTAGATTCCTTCTGAATATTGTAGTCTGCCAGGGTGCGGCCATCCTCC 665787
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|| || || || ||||| || || |||||||||||| | || | |||||||||||
Sbjct 665788 AGTTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGG 665847
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|| || ||| ||| | || | ||| | ||| || || | ||| || |||||
Sbjct 665848 ATTTTGGCTTTCACGTTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGATAGTTTTC 665907
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| || ||||||||||| |||||||||
Sbjct 665908 CCCGTAAGTGTCTTCACAAATATCTGCATA 665937
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| |||||||| || | |||| | || |||| || ||||||||||| |||||
Sbjct 665973 TTCCTTCTGGATGTTATAATCAGCAAGGGTACGGCCATCCTCAAGCTGTTTTCCAGCAAA 666032
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
||| || | ||||||||| | || | ||||||||||| || || || |||
Sbjct 666033 TATCAGCCTTTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATTTTAGCCTTCACGTT 666092
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
|||| | ||| | ||| || || | ||| ||||| ||||| || || ||||| ||
Sbjct 666093 GTCTATAGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCAGTAAGGGTCTTGAC 666152
Query 34970 AAAGATCTGCAT 34981
||| ||||||||
Sbjct 666153 AAATATCTGCAT 666164
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| || || ||||| ||||| || ||| |||| |||| || ||||| |||||||| ||
Sbjct 530826 TTCCTTTTGGATGTTGTAGTCAGAGAGGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAA 530767
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| | | |||||||| | || | ||||||||||| ||| || ||||||
Sbjct 530766 GATCAACCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGAATTTTGGATTTGACATT 530707
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | |||| ||| | ||| || || | || ||||| || || ||||| ||||||||
Sbjct 530706 TTCGATCGTGTCAGAGCTCTCCACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTCAC 530647
Query 34970 AAAGATCTGCAT 34981
||| ||||||||
Sbjct 530646 AAATATCTGCAT 530635
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||||||||| || |||| |||| | || |||| || ||||||||||| || ||
Sbjct 665517 TTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGTTTTCCAGCGAA 665576
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | ||||| ||| |||| | |||||| ||||| |||||| || |||
Sbjct 665577 GATGAGCCTCTGCTGATCTGGCGGTATCCCCTCTTTGTCCTGAATCTTTGCCTTCACGTT 665636
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | || ||| || || | || || ||||| || || || || |||||
Sbjct 665637 ATCAATTGTGTCTGAACTCTCCACCTCAAGAGTGATAGTTTTCCCAGTAAGTGTTTTCAC 665696
Query 34970 AAAGATCTGCATA 34982
||| |||||||||
Sbjct 665697 AAATATCTGCATA 665709
>seq202
Length=4793652
Score = 109 bits (120), Expect = 4e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||| | ||||| ||| ||||||||| |||||||| || | || | || |||| ||
Sbjct 4329558 AACAAGGTGAAGTGTCGATTCTTTCTGGATGTTATAATCAGCCAGCGTGCGACCATCCTC 4329499
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||||| |||||||| || || || ||||| || | || | |||||||| ||
Sbjct 4329498 GAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGATCAGGAGGAATGCCCTCCTTATCCTG 4329439
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||||| || ||| | || | ||| | || || || | ||| ||||| ||
Sbjct 4329438 AATCTTCGCCTTCACGTTATCAATTGTATCAGAGCTTTCTACCTCAAGGGTGATGGTCTT 4329379
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||| || ||||||||||||||||| |||||
Sbjct 4329378 TCCAGTAAGAGTCTTCACAAAGATTTGCAT 4329349
Score = 87.8 bits (96), Expect = 1e-12
Identities = 135/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||||||||| || |||| |||| | || |||| || ||||| || || |||||
Sbjct 4328989 TTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAA 4328930
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| |||| ||||||||| | || | || || ||||| ||||| |||||
Sbjct 4328929 GATAAGTCTTTGCTGGTCCGGAGGGATGCCTTCTTTGTCCTGTATCTTAGCCTTGACATT 4328870
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | ||| | |||||| || | || || || || || || || ||||||||
Sbjct 4328869 GTCAATGGTGTCAGAGCTCTCAACTTCAAGAGTGATTGTCTTGCCGGTAAGCGTCTTCAC 4328810
Query 34970 AAAGATCTGCATA 34982
|| |||||||||
Sbjct 4328809 GAAAATCTGCATA 4328797
>seq2
Length=81761211
Score = 104 bits (114), Expect = 2e-17
Identities = 150/208 (72%), Gaps = 8/208 (4%)
Strand=Plus/Plus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| ||| || ||||| ||||| ||||||| || | || |||| || || ||
Sbjct 19640707 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGCCCATCCTCAAGTTG 19640766
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
||||||||||| || || | |||||||| | || | ||||||||||| |||||
Sbjct 19640767 CTTTCCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTT 19640826
Query 34898 CTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTC 34953
||| || | ||||||| | ||| || |||||| || | ||| ||||| || |
Sbjct 19640827 GGCTTTCAC----GTTATCGATGGTGTCCGAGCTCTCAACCTCCAAGGTAATGGTCTTCC 19640882
Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || ||||||||||| |||||||||||
Sbjct 19640883 CAGTAAGAGTCTTCACGAAGATCTGCAT 19640910
>seq640
Length=221176
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||| | ||||| || ||| |||||||| || || || | ||| | || | || ||
Sbjct 161962 AACGAGGTGAAGCGTCGATTCCTTCTGAATATTGTAATCGGCGAGGGTACGGCCGTCCTC 162021
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
||||| || || ||||| |||| || ||||| ||| | || | |||||||||||
Sbjct 162022 AAGCTGCTTCCCAGCAAAGATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTG 162081
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||||| ||| ||| | |||| || || ||| || |||| ||| || || ||
Sbjct 162082 AATCTTCGCTTTAACGTTGTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTT 162141
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
||||| || || || || ||||| ||||| ||
Sbjct 162142 CCCCGTTAGGGTTTTGACGAAGATTTGCATCTT 162174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324279163412352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |