Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq89584 551 2e-152 seq64191 251 2e-62 seq374 194 5e-45 seq2 194 5e-45 >seq89584 Length=148959 Score = 551 bits (610), Expect = 2e-152 Identities = 710/977 (73%), Gaps = 2/977 (0%) Strand=Plus/Plus Query 35973 GCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 36032 ||||| || || |||||||||||||| ||||| |||||||| |||||||| || | | Sbjct 155 GCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATACCAAGATTA 214 Query 36033 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 36092 ||||| || | || ||||||||||| | || | || | | |||||| || || Sbjct 215 GCACGATTTATGATATCAGCCCAAGTGTTAATAACACGACCTTGGCTATCAACTACGGAT 274 Query 36093 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 36152 || || || ||||| ||||| | || || |||||||| | |||| ||| || | | Sbjct 275 TGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAAGCAGTGAAC 334 Query 36153 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAG 36212 || || | || ||||||||||||| ||||||||| || ||| ||| || || Sbjct 335 CAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAATTGTTGAAA 394 Query 36213 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 36272 |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| || Sbjct 395 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAGGTT 454 Query 36273 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCAC-G 36331 ||||| ||||| || ||| | || || | || ||| ||| |||| ||||| | | Sbjct 455 TCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCTG 514 Query 36332 AATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATAC 36391 | ||| | ||||| || | | || ||||||||| ||||| | || |||||||| Sbjct 515 ATTAAACTA-GAAGTTACCAAAGAACCATGCATAGCACTGAATAGGGAACCGCCGAATAC 573 Query 36392 CCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGAC 36451 || || || || | ||| || || ||||||||||| || ||||| |||||||| || || Sbjct 574 ACCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATGTTGTGCTCTGCCTGGAATAC 633 Query 36452 AAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTG 36511 || ||| || |||||||| || || || || | ||||||||||||||||||||| ||||| Sbjct 634 AATCATGAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTG 693 Query 36512 TCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTAC 36571 |||| |||||||| ||||| ||||| || || |||||||| |||||||| || || Sbjct 694 ACCAATAGGGTAGATCAAGAAAACAGCTGTAGCAGCCGCAACAGGAGCTGAATATGCAAC 753 Query 36572 ACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGC 36631 | ||||| || | |||||| || | ||||||||||||| | || |||| |||| Sbjct 754 AGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACA 813 Query 36632 TGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCA 36691 | | ||||| | |||||| | ||||| |||| ||| || || || || |||||||| Sbjct 814 AGCTACACCAAGTAAAAAGTGTAGAACAATAAGTTCATAAGGACCGCCATTGTATAACCA 873 Query 36692 CTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGA 36751 ||| || | | ||| |||||||| |||||||| || || | ||| || || || | Sbjct 874 CTCATCAACAGATGCTGCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTGCGGAAGT 933 Query 36752 TGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTC 36811 || | || || || ||||| || ||||||||||| |||| | || || ||||| || Sbjct 934 AGGAATAATGGCACCTGAGATAATATTGTTTCCATAAAGTAGAGACCCAGAAACAGGTTC 993 Query 36812 ACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCAC 36871 |||||||||||| ||||| || ||||| ||||||| || ||||| | |||| | | Sbjct 994 ACGAATACCATCAATATCGACTGGAGGGGCAGCAATGAAGGCAATGATAAATACAGAAGT 1053 Query 36872 TGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTT 36931 ||| || || | | ||||||||| | || |||||||| || | || || ||||| | Sbjct 1054 TGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTTC 1113 Query 36932 TGTACTTGTAACCCAGT 36948 ||||| |||| ||||| Sbjct 1114 AGTACTGGTAATCCAGT 1130 >seq64191 Length=168564 Score = 251 bits (278), Expect = 2e-62 Identities = 360/507 (71%), Gaps = 0/507 (0%) Strand=Plus/Minus Query 36429 ATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGC 36488 || ||||| |||| ||| | |||| ||| || |||||| | || || || || | |||| Sbjct 59082 ATGTTGTGCTCTGACTGGCATACAATCATGAAGTTGAAATTACCAGATATTCCTAAAGGC 59023 Query 36489 ATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCT 36548 ||||||||||||||||| ||||| |||| |||||||| ||| | |||| || || Sbjct 59022 ATACCATCAGAGAAACTTCCTTGGCCAATAGGGTAGATCAAGTAAACAGTTGTAGCAGCC 58963 Query 36549 GCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGT 36608 |||||||| |||||||| || ||| ||||| || | |||||| || | |||||||| Sbjct 58962 GCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCACATACCCAGACGGAAACTAAGT 58903 Query 36609 TCCCATTGTCGTCCCAAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGA 36668 ||||| | || |||| |||| | | ||||| | ||||| | ||||| |||| | Sbjct 58902 TCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAAAAGTATAGAACAATAAGTTCA 58843 Query 36669 TATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAG 36728 || || || ||| ||||||||||| || | | | | ||||||| |||||||| || Sbjct 58842 TAAGGACCGTTGTTGTATAACCACTCATCAACAGATTCTACTTCCCATATTGGGTAAAAA 58783 Query 36729 TGAAGACCGATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAG 36788 || | ||| || || || | || | || | | ||||| || ||||||||||| Sbjct 58782 TGCAAACCTATAGCTGCGGAAGTAGGAATAATGACACTTGAGATAATATTGTTTCCATAA 58723 Query 36789 AGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACA 36848 |||| | || || ||||| |||||||||||||| ||||| | |||| ||||||| Sbjct 58722 AGTAGAGACCCAGAAACAGGTTCACGAATACCATCAATATCGGCTGGAGAGGCAGCAATG 58663 Query 36849 AATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAAC 36908 || ||||| | |||||| ||| || || | | ||||||||| | | ||||| Sbjct 58662 AAGGCAATGATAAATGCATAAGTTGCGGTCAATAAAGTAGGGATCATCAAAATACCAAAT 58603 Query 36909 CACCCCACATAGAGGCGGTTGTTTGTA 36935 || || | || || ||||| || ||| Sbjct 58602 CATCCGATGTAAAGACGGTTTTTGGTA 58576 >seq374 Length=1248919 Score = 194 bits (214), Expect = 5e-45 Identities = 287/404 (71%), Gaps = 2/404 (0%) Strand=Plus/Minus Query 35973 GCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 36032 ||||| || || |||||||||||||| ||||| |||||||| |||||||| || | | Sbjct 601186 GCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATACCAAGATTA 601127 Query 36033 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 36092 ||||| || | || ||||||||||| | || | || | | |||||| || || Sbjct 601126 GCACGATTTATGATATCAGCCCAAGTGTTAATAACACGACCTTGGCTATCAACTACGGAT 601067 Query 36093 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 36152 || || || ||||| ||||| | || || |||||||| | |||| ||| || | | Sbjct 601066 TGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAAGCAGTGAAC 601007 Query 36153 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAG 36212 || || | || ||||||||||||| ||||||||| || ||| ||| || || Sbjct 601006 CAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAATTGTTGAAA 600947 Query 36213 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 36272 |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| || Sbjct 600946 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAGGTT 600887 Query 36273 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCAC-G 36331 ||||| ||||| || ||| | || || | || ||| ||| |||| ||||| | | Sbjct 600886 TCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCTG 600827 Query 36332 AATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATA 36375 | ||| | ||||| || | | || ||||||||| ||||| Sbjct 600826 ATTAAACTA-GAAGTTACCAAAGAACCATGCATAGCACTGAATA 600784 >seq2 Length=81761211 Score = 194 bits (214), Expect = 5e-45 Identities = 287/404 (71%), Gaps = 2/404 (0%) Strand=Plus/Minus Query 35973 GCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 36032 ||||| || || |||||||||||||| ||||| |||||||| |||||||| || | | Sbjct 48006180 GCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATACCAAGATTA 48006121 Query 36033 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 36092 ||||| || | || ||||||||||| | || | || | | |||||| || || Sbjct 48006120 GCACGATTTATGATATCAGCCCAAGTGTTAATAACACGACCTTGGCTATCAACTACGGAT 48006061 Query 36093 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 36152 || || || ||||| ||||| | || || |||||||| | |||| ||| || | | Sbjct 48006060 TGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAAGCAGTGAAC 48006001 Query 36153 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAG 36212 || || | || ||||||||||||| ||||||||| || ||| ||| || || Sbjct 48006000 CAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAATTGTTGAAA 48005941 Query 36213 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 36272 |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| || Sbjct 48005940 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAGGTT 48005881 Query 36273 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCAC-G 36331 ||||| ||||| || ||| | || || | || ||| ||| |||| ||||| | | Sbjct 48005880 TCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCTG 48005821 Query 36332 AATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATA 36375 | ||| | ||||| || | | || ||||||||| ||||| Sbjct 48005820 ATTAAACTA-GAAGTTACCAAAGAACCATGCATAGCACTGAATA 48005778 Score = 95.1 bits (104), Expect = 4e-15 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 36543 GCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAA 36602 || || |||||||| |||||||| || ||| ||||| || |||||| | || Sbjct 22128664 GCAGCCGCAACAGGAGCTGAATATGCAACAACAATCCAAGGGTGCATACCCTGATGGAAA 22128605 Query 36603 CTAAGTTCCCATTGTCGTCCCAAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATG 36662 ||||||||||| | || |||| |||| | | |||||| | |||||| | ||||| Sbjct 22128604 CTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAATTAAAAAGTGTAGAACAATA 22128545 Query 36663 AGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGG 36722 | || ||| || || || || ||||||||||| || | | || |||||||| |||| | Sbjct 22128544 ATTTCATAAGGACCGCCATTGTATAACCACTCATCAATAGATGTTGCTTCCCATATTGAG 22128485 Query 36723 TA 36724 || Sbjct 22128484 TA 22128483 Score = 82.4 bits (90), Expect = 2e-11 Identities = 195/292 (67%), Gaps = 2/292 (1%) Strand=Plus/Plus Query 36658 CAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGA 36717 |||| |||| ||| || | || ||||| || || || | | || |||||||| | Sbjct 9670958 CAATAAGTTCATAAGGATTGTCATTGTATAATCATTCATCAACAGATGATGCTTCCCATA 9671017 Query 36718 TTGGGTAGAAGTGAAGACCGATTGCGTTCGATGATGGGACGATTGCC-CCAGAGATGATG 36776 ||||||| || | | | | || || | || || ||| | || | || ||||| || Sbjct 9671018 TTGGGTAAAAATACAAAGCTATAGC-TGCGGAAATAGGAATAATGACACCTGAGATAATA 9671076 Query 36777 TTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGA 36836 || ||| |||| | ||| | | || | | | ||| |||||||||| ||||| | || Sbjct 9671077 TTATTTTCATAAAATAAAGACCTAGAAATAAGTTCATGAATACCATCAATATCGATTAGA 9671136 Query 36837 GGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATT 36896 || ||||||| || |||| | |||| | | | ||| || || | | |||||||||| Sbjct 9671137 GGGGCAGCAATGAAGACAATGATAAATACAGATATTGCAGTCAATAAAGTAGGGATCATT 9671196 Query 36897 AGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAGT 36948 | || ||||| || || | || ||||| | ||||| ||| ||||| Sbjct 9671197 AAAACACCAAATCATCCGATGTACGTACGGTTTTCAGTACTGATAATCCAGT 9671248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150294345104736