Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_016658.1
Length=47741
Score E
Sequences producing significant alignments: (Bits) Value
seq89584 583 3e-162
seq64191 233 6e-57
seq374 233 6e-57
seq2 233 6e-57
>seq89584
Length=148959
Score = 583 bits (646), Expect = 3e-162
Identities = 724/987 (73%), Gaps = 8/987 (1%)
Strand=Plus/Plus
Query 5195 GCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTG 5254
|||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||| ||
Sbjct 155 GCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATACCAAGATTA 214
Query 5255 GCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACC---GCTAGAGTCAACGACT 5311
||||| || | || ||| ||||||||| || | | ||| |||| ||||| ||
Sbjct 215 GCACGATTTATGATATCAGCCCAAGTGTTAATAACACGACCTTGGCTA---TCAACTACG 271
Query 5312 GACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTA 5371
|| || || || ||||| ||||| | || || |||||||| || |||| || ||
Sbjct 272 GATTGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAAGCAGTG 331
Query 5372 AGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTA 5431
| ||| || | || || ||||||| ||||| ||||||||| || |||| ||||||
Sbjct 332 AACCAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAATTGTTG 391
Query 5432 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 5491
|| |||||||| |||||||| | || ||||| || |||||||| || ||||| |||||
Sbjct 392 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAG 451
Query 5492 GTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCA 5551
|||||||||||||| || ||| | || || | || ||| | |||| |||||
Sbjct 452 GTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCC 511
Query 5552 CGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAAT 5611
| || | |||||| || | | |||||||||||| ||| | | || ||||||
Sbjct 512 CTGATTAAACTAGAAGTTACCAAAGAACCATGCATAGCACTGAATAGGGAACCGCCGAAT 571
Query 5612 ACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAAT 5671
|| ||||| || || | |||||| || ||||||||||| || ||||| ||||||||||||
Sbjct 572 ACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATGTTGTGCTCTGCCTGGAAT 631
Query 5672 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCC 5731
|| | ||| ||||| ||||||||||| || || | ||||||||||||| |||||||||
Sbjct 632 ACAATCATGAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCT 691
Query 5732 TGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGC 5790
|| || | |||||| | || || || | ||| || || ||||| || |||||||||||
Sbjct 692 TGACCAATAGGGTAGATCAAGAAAACAGCTGTA-GCAGCCGCAACAGGAGCTGAATATGC 750
Query 5791 TACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTA 5850
|| |||||| || ||||| || | | | ||||||||||||| | || |||| |||
Sbjct 751 AACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTA 810
Query 5851 AGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAG 5910
| || | ||||| | ||||| | || | |||| || || || |||||||| |
Sbjct 811 ACAAGCTACACCAAGTAAAAAGTGTAGAACAATAAGTTCATAAGGACCGCCATTGTATAA 870
Query 5911 CCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGA 5970
||| ||||| | | ||||||||||| || || || || || || || || || |||
Sbjct 871 CCACTCATCAACAGATGCTGCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTGCGGA 930
Query 5971 GCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGG 6030
| || | || ||| ||||| || || ||||||||||| |||||||| || | || ||
Sbjct 931 AGTAGGAATAATGGCACCTGAGATAATATTGTTTCCATAAAGTAGAGACCCAGAAACAGG 990
Query 6031 TTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGT 6090
|||||| || || || || |||||||| || ||||| | ||| || | |||||| |||
Sbjct 991 TTCACGAATACCATCAATATCGACTGGAGGGGCAGCAATGAAGGCAATGATAAATACAGA 1050
Query 6091 AGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTT 6150
||||||||| || | | || ||||| || ||||||||||| || | || || |||||
Sbjct 1051 AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTT 1110
Query 6151 GTTGGTGCTAGTAACCCAGTCACAGAA 6177
| || || |||| ||||| |||||
Sbjct 1111 TTCAGTACTGGTAATCCAGTTGCAGAA 1137
>seq64191
Length=168564
Score = 233 bits (258), Expect = 6e-57
Identities = 360/509 (71%), Gaps = 6/509 (1%)
Strand=Plus/Minus
Query 5651 ATATTGTGTTCTGCCTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGC 5710
|| ||||| |||| |||| |||| | ||| ||||| ||| ||||||| || || | ||||
Sbjct 59082 ATGTTGTGCTCTGACTGGCATACAATCATGAAGTTGAAATTACCAGATATTCCTAAAGGC 59023
Query 5711 ATACCATCACTGAAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTGA-GTAGGCTGC 5769
||||||||| ||||||||| || || | |||||| | || | || | |||| | ||
Sbjct 59022 ATACCATCAGAGAAACTTCCTTGGCCAATAGGGTAGATCAAGTAAACAGTTGTAG-CAGC 58964
Query 5770 GGCAACCGGTGCTGAATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAG 5829
||||| || ||||||||||| || |||||| || | ||| || | | | |||||||
Sbjct 58963 CGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCACATACCCAGACGGAAACTAAG 58904
Query 5830 TTCCCATTGGCGTCCCAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTG 5889
|||||| | || |||| |||| || | ||||| | |||| | || | ||||
Sbjct 58903 TTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAAAAGTATAGAACAATAAGTTC 58844
Query 5890 GTATGGTCCTCCATTGTAAAGCCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAG 5947
|| || || ||||| | ||| ||||| | |||| || ||||||| || || ||
Sbjct 58843 ATAAGGACCGTTGTTGTATAACCACTCATCAACAGATT--CTACTTCCCATATTGGGTAA 58786
Query 5948 AAGTGTAACCCAATTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCA 6007
|| || || || || || ||| | || | || | | | ||| || || |||||||||
Sbjct 58785 AAATGCAAACCTATAGCTGCGGAAGTAGGAATAATGACACTTGAGATAATATTGTTTCCA 58726
Query 6008 TAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCT 6067
|| |||||||| || | || |||||||| || || || || ||| |||| | |||||
Sbjct 58725 TAAAGTAGAGACCCAGAAACAGGTTCACGAATACCATCAATATCGGCTGGAGAGGCAGCA 58666
Query 6068 ACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCA 6127
| ||| || | ||||||||| ||||||||| || | | || ||||| || | ||||
Sbjct 58665 ATGAAGGCAATGATAAATGCATAAGTTGCGGTCAATAAAGTAGGGATCATCAAAATACCA 58606
Query 6128 AACCACCCCACATAGAGGCGGTTGTTGGT 6156
|| || || | || || ||||| |||||
Sbjct 58605 AATCATCCGATGTAAAGACGGTTTTTGGT 58577
>seq374
Length=1248919
Score = 233 bits (258), Expect = 6e-57
Identities = 250/329 (76%), Gaps = 6/329 (2%)
Strand=Plus/Minus
Query 5195 GCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTG 5254
|||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||| ||
Sbjct 601186 GCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATACCAAGATTA 601127
Query 5255 GCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACC---GCTAGAGTCAACGACT 5311
||||| || | || ||| ||||||||| || | | ||| |||| ||||| ||
Sbjct 601126 GCACGATTTATGATATCAGCCCAAGTGTTAATAACACGACCTTGGCTA---TCAACTACG 601070
Query 5312 GACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTA 5371
|| || || || ||||| ||||| | || || |||||||| || |||| || ||
Sbjct 601069 GATTGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAAGCAGTG 601010
Query 5372 AGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTA 5431
| ||| || | || || ||||||| ||||| ||||||||| || |||| ||||||
Sbjct 601009 AACCAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAATTGTTG 600950
Query 5432 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 5491
|| |||||||| |||||||| | || ||||| || |||||||| || ||||| |||||
Sbjct 600949 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAG 600890
Query 5492 GTTTCTTCCTCTTGGCCGAATTTATATCC 5520
|||||||||||||| || ||| | || ||
Sbjct 600889 GTTTCTTCCTCTTGACCAAATCTGTAACC 600861
>seq2
Length=81761211
Score = 233 bits (258), Expect = 6e-57
Identities = 250/329 (76%), Gaps = 6/329 (2%)
Strand=Plus/Minus
Query 5195 GCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTG 5254
|||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||| ||
Sbjct 48006180 GCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATACCAAGATTA 48006121
Query 5255 GCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACC---GCTAGAGTCAACGACT 5311
||||| || | || ||| ||||||||| || | | ||| |||| ||||| ||
Sbjct 48006120 GCACGATTTATGATATCAGCCCAAGTGTTAATAACACGACCTTGGCTA---TCAACTACG 48006064
Query 5312 GACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTA 5371
|| || || || ||||| ||||| | || || |||||||| || |||| || ||
Sbjct 48006063 GATTGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAAGCAGTG 48006004
Query 5372 AGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTA 5431
| ||| || | || || ||||||| ||||| ||||||||| || |||| ||||||
Sbjct 48006003 AACCAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAATTGTTG 48005944
Query 5432 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 5491
|| |||||||| |||||||| | || ||||| || |||||||| || ||||| |||||
Sbjct 48005943 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAG 48005884
Query 5492 GTTTCTTCCTCTTGGCCGAATTTATATCC 5520
|||||||||||||| || ||| | || ||
Sbjct 48005883 GTTTCTTCCTCTTGACCAAATCTGTAACC 48005855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 152487209829024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |