Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq876 143 2e-29 seq202 125 6e-24 seq2 120 2e-22 seq640 114 1e-20 seq921 107 2e-18 seq258 93.3 3e-14 seq700 87.8 1e-12 >seq876 Length=1913211 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| | || | ||| | ||| ||||| ||||| ||||| || ||||| || | Sbjct 530863 TTCCCCCTCTGAGGCGGAGAACGAGATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAG 530804 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 || |||| |||| || | ||||| || || || ||||| | ||| || || || | Sbjct 530803 AGAGGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGG 530744 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | ||||| || || ||||||||||| ||| ||| |||| | |||||||| | |||| Sbjct 530743 GGATGCCCTCCTTGTCTTGAATTTTGGATTTGACATTTTCGATCGTGTCAGAGCTCTCCA 530684 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | ||||| |||| || |||||||| | || || |||||||||||||| Sbjct 530683 CCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 530635 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| |||||||| || || |||||||| || || | || | | |||| |||| |||| Sbjct 665734 TGAAGAGTAGATTCCTTCTGAATATTGTAGTCTGCCAGGGTGCGGCCATCCTCCAGTTGC 665793 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| || || || || || || ||||| || || || || ||||| Sbjct 665794 TTGCCAGCAAAGATCAGCCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATTTTG 665853 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| || | || | ||| ||||| | ||||| ||||| |||| ||||| || || Sbjct 665854 GCTTTCACGTTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGATAGTTTTCCCCGTA 665913 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || |||||||||||||| Sbjct 665914 AGTGTCTTCACAAATATCTGCAT 665936 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||||||||| || || ||||||||||| || | |||| | |||| || | ||| Sbjct 666418 TGTAGGGTAGATTCCTTCTGGATATTGTAATCAGCAAGGGTTCGGCCATCCTCTAGCTGC 666477 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| | ||||||||| ||||| ||||| || || || || || || Sbjct 666478 TTTCCGGCAAAGATCAGCCTCTGTTGATCCGGCGGGATGCCCTCCTTGTCCTGTATCTTA 666537 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | || ||||| | ||||| ||||| |||| || ||||| || Sbjct 666538 GCCTTCACGTTGTCGATGGTATCAGAACTCTCCACCTCAAGGGTGATGGTCTTGCCTGTG 666597 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| || || |||||||| Sbjct 666598 AGGGTTTTGACGAAGATCTGCAT 666620 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || | ||| | ||| | || |||||||| ||||| || || ||||| |||| | Sbjct 530177 CCTCCCCTAAGACGAAGAACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCGGAG 530118 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||| | | || || | || || || || || |||| | ||| ||||| || || Sbjct 530117 AGCGTTCGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGATCCGGTGGG 530058 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| ||||| || ||||| || || |||| | || || || | ||||| Sbjct 530057 ATTCCTTCCTTATCCTGGATTTTAGACTTAACGTTTTCAATCGTATCGGAGCTCTCCACG 529998 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || | || |||||||| | || || |||||||||||||| Sbjct 529997 TCAAGGGTTATTGTCTTGCCGGTGAGGGTCTTGACAAATATCTGCAT 529951 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || | ||| | || | ||| ||||||||||| || || || || ||||| || Sbjct 665938 CCACCCCTAAGACGAAGCACGAGATGTAGGGTAGATTCCTTCTGGATGTTATAATCAGCA 665997 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || | || || || |||||||||| | || || || || ||| Sbjct 665998 AGGGTACGGCCATCCTCAAGCTGTTTTCCAGCAAATATCAGCCTTTGCTGGTCCGGGGGA 666057 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || || || || ||||| || || | |||| ||||||||| | ||||| Sbjct 666058 ATGCCCTCCTTGTCCTGGATTTTAGCCTTCACGTTGTCTATAGTGTCAGAGCTCTCCACC 666117 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| |||| || || || || | || || |||||||||||||| Sbjct 666118 TCAAGGGTGATGGTCTTTCCAGTAAGGGTCTTGACAAATATCTGCAT 666164 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| ||||| || || || |||||||| || | || | | |||| || | || Sbjct 665506 TGGAGGGTGGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGT 665565 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | | ||| ||||| ||||| || || ||||| || ||||| ||| Sbjct 665566 TTTCCAGCGAAGATGAGCCTCTGCTGATCTGGCGGTATCCCCTCTTTGTCCTGAATCTTT 665625 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| || | ||||| |||||||||| ||||| || || Sbjct 665626 GCCTTCACGTTATCAATTGTGTCTGAACTCTCCACCTCAAGAGTGATAGTTTTCCCAGTA 665685 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| |||||||||||||| Sbjct 665686 AGTGTTTTCACAAATATCTGCAT 665708 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||||||||| || || || ||||| ||||| | || | || || || | ||| Sbjct 531065 TGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTACGAGCGTCCTCAAGCTGC 531006 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| || || ||||| | || || || || | || || || || || || || || Sbjct 531005 TTACCGGCGAAGATCAACCTTTGCTGGTCCGGTGAAAGTCCCTCCTTGTCCTGGATCTTC 530946 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || || || || |||||||| | ||||| || || || | || ||||| || Sbjct 530945 GACTTCACTATCTCGACGGTGTCAGAGCTCTCCACCTCGAGGGTAATAGTCTTGCCAGTG 530886 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| ||||| |||||||| Sbjct 530885 AGGGTTTTGACAAAAATCTGCAT 530863 >seq202 Length=4793652 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || | || || || | ||| |||||||| || || || || || ||||| || Sbjct 4328796 CCTCCCCTGAGTCGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCTGCA 4328737 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || | ||||| || ||||| || || | ||| || || || ||| Sbjct 4328736 AGTGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGAGGA 4328677 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||||||||| || || || || || ||| | |||| ||||| || | || ||| Sbjct 4328676 ATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCAACT 4328617 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| ||| || || |||| || || ||||| |||||||| Sbjct 4328616 TCAAGAGTGATCGTCTTACCAGTTAGGGTCTTCACAAAAATCTGCAT 4328570 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| |||||||| || || |||||||| || || | || | |||| || | || Sbjct 4329324 ATGAAGAGTAGATTCCTTCTGAATATTGTAGTCCGCAAGGGTGCGACCATCCTCAAGCTG 4329265 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| ||||| || | ||||| || || || ||||| || || |||||||| ||||| Sbjct 4329264 CTTACCAGCAAAAATGAGGCGCTGCTGGTCCGGTGGAATCCCCTCCTTATCTTGGATTTT 4329205 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | |||||| || | || |||||||| |||| || || || || Sbjct 4329204 AGCCTTAACATTGTCAATAGTGTCGGAGCTCTCAACTTCAAGTGTGATTGTCTTTCCAGT 4329145 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||||| |||||||||||||| Sbjct 4329144 GAGGGTTTTCACAAATATCTGCAT 4329121 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| ||||| || || || |||||||| || | || | | |||| || | ||| Sbjct 4329000 TGGAGGGTGGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGC 4328941 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | | || || || || || ||||||||||| || || || || Sbjct 4328940 TTCCCAGCAAAGATAAGTCTTTGCTGGTCCGGAGGGATGCCTTCTTTGTCCTGTATCTTA 4328881 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||||| | || ||||||||||||| || |||||||| Sbjct 4328880 GCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACTTCAAGAGTGATTGTCTTGCCGGTA 4328821 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 4328820 AGCGTCTTCACGAAAATCTGCAT 4328798 >seq2 Length=81761211 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || || || || || ||||| |||||||| || | || | |||| |||| || Sbjct 19641163 ATGGAGAGTGGACTCCTTCTGTATGTTGTAATCAGCAAGGGTGCGACCATCCTCCAGCTG 19641222 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||| | ||||||||| || ||||||||||| ||||| || || || Sbjct 19641223 CTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAGGAATGCCTTCCTTATCCTGGATCTT 19641282 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | || || | || | |||||||| ||||||| ||||| |||| || |||||||| Sbjct 19641283 TGCATTCACGTTGTCGATGGTGTCAGAACTTTCCACCTCAAGGGTGATAGTCTTGCCGGT 19641342 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| || | ||| Sbjct 19641343 AAGAGACTTAACAAAGATTTTCAT 19641366 >seq640 Length=221176 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | ||||| || ||||| || || |||||||||||||||| || | | | Sbjct 161956 ACGGAGAACGAGGTGAAGCGTCGATTCCTTCTGAATATTGTAATCGGCGAGGGTACGGCC 162015 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 || || | ||||| || ||||| || || ||||| ||||| || |||||||| || || Sbjct 162016 GTCCTCAAGCTGCTTCCCAGCAAAGATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTT 162075 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || ||||| || ||| || | || | ||||| || | ||||| || || |||| Sbjct 162076 GTCCTGAATCTTCGCTTTAACGTTGTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGAT 162135 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || |||| ||||| || || || ||||| Sbjct 162136 TGTCTTCCCCGTTAGGGTTTTGACGAAGATTTGCAT 162171 >seq921 Length=516242 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || | ||| | ||| | || || ||| | || || || || ||||| || || Sbjct 186615 CCTCCCCTCAGACGGAGAACAAGGTGGAGTGTAAACTCCTTCTGGATGTTGTAGTCTGCA 186674 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| ||||| || || || ||||| | || ||||| || || Sbjct 186675 AGGGTACGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAACCTTTGCTGATCTGGAGGG 186734 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| ||||||||||||||||| || || | || | ||||| || |||| || Sbjct 186735 ATGCCCTCTTTATCTTGAATTTTGGCCTTCACTTTGTCGATGGTGTCTGAGCTTTCAACC 186794 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || || ||||| | ||| || ||||| |||||||| Sbjct 186795 TCTAGGGTGATAGTCTTACCGGTGAGAGTCTTCACAAAGATCTGCAT 186841 >seq258 Length=1945713 Score = 93.3 bits (102), Expect = 3e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| | | ||||||||||| || || || || || || || |||||||| | Sbjct 1660560 TTCCACCTCTAAGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCTG 1660501 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | || | |||| || || || || || ||||| |||||||| |||||||| || | Sbjct 1660500 CTAAGGTCCGACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGTTGTTGATCAGGTG 1660441 Query 101361 GAATGCCTTCTTTATCTTG 101379 |||||||||| || || || Sbjct 1660440 GAATGCCTTCCTTGTCCTG 1660422 >seq700 Length=617226 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || ||||| || || || | ||| | |||| || | ||| Sbjct 335071 TGGAGGGTCGACTCCTTCTGGATATTATAGTCAGCTAGAGTGCGTCCATCCTCGAGCTGC 335012 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | || || || || || ||||||||||| || || || || || Sbjct 335011 TTTCCGGCGAAGATAAGGCGTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTG 334952 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| || | ||||| || || |||| ||| || || ||| Sbjct 334951 GCCTTAACGTTGTCAATGGTGTCGGATGACTCCACCTCCAGGGTGATCGTCTTCCCCGTT 334892 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | |||||||| || |||||||| Sbjct 334891 AGGGTTTTTACGAAGATCTGCAT 334869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395845741261488