Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq876 143 2e-29
seq202 125 6e-24
seq2 120 2e-22
seq640 114 1e-20
seq921 107 2e-18
seq258 93.3 3e-14
seq700 87.8 1e-12
>seq876
Length=1913211
Score = 143 bits (158), Expect = 2e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| ||||| | || | ||| | ||| ||||| ||||| ||||| || ||||| || |
Sbjct 530863 TTCCCCCTCTGAGGCGGAGAACGAGATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAG 530804
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
|| |||| |||| || | ||||| || || || ||||| | ||| || || || |
Sbjct 530803 AGAGGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGG 530744
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
| ||||| || || ||||||||||| ||| ||| |||| | |||||||| | ||||
Sbjct 530743 GGATGCCCTCCTTGTCTTGAATTTTGGATTTGACATTTTCGATCGTGTCAGAGCTCTCCA 530684
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
| ||||| |||| || |||||||| | || || ||||||||||||||
Sbjct 530683 CCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 530635
Score = 123 bits (136), Expect = 2e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||| |||||||| || || |||||||| || || | || | | |||| |||| ||||
Sbjct 665734 TGAAGAGTAGATTCCTTCTGAATATTGTAGTCTGCCAGGGTGCGGCCATCCTCCAGTTGC 665793
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| |||| || || || || || || ||||| || || || || |||||
Sbjct 665794 TTGCCAGCAAAGATCAGCCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATTTTG 665853
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| || | || | ||| ||||| | ||||| ||||| |||| ||||| || ||
Sbjct 665854 GCTTTCACGTTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGATAGTTTTCCCCGTA 665913
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || ||||||||||||||
Sbjct 665914 AGTGTCTTCACAAATATCTGCAT 665936
Score = 118 bits (130), Expect = 8e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||||||||| || || ||||||||||| || | |||| | |||| || | |||
Sbjct 666418 TGTAGGGTAGATTCCTTCTGGATATTGTAATCAGCAAGGGTTCGGCCATCCTCTAGCTGC 666477
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| |||| | ||||||||| ||||| ||||| || || || || || ||
Sbjct 666478 TTTCCGGCAAAGATCAGCCTCTGTTGATCCGGCGGGATGCCCTCCTTGTCCTGTATCTTA 666537
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | || ||||| | ||||| ||||| |||| || ||||| ||
Sbjct 666538 GCCTTCACGTTGTCGATGGTATCAGAACTCTCCACCTCAAGGGTGATGGTCTTGCCTGTG 666597
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| || || ||||||||
Sbjct 666598 AGGGTTTTGACGAAGATCTGCAT 666620
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| || | ||| | ||| | || |||||||| ||||| || || ||||| |||| |
Sbjct 530177 CCTCCCCTAAGACGAAGAACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCGGAG 530118
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||| | | || || | || || || || || |||| | ||| ||||| || ||
Sbjct 530117 AGCGTTCGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGATCCGGTGGG 530058
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| ||||| || ||||| || || |||| | || || || | |||||
Sbjct 530057 ATTCCTTCCTTATCCTGGATTTTAGACTTAACGTTTTCAATCGTATCGGAGCTCTCCACG 529998
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || | || |||||||| | || || ||||||||||||||
Sbjct 529997 TCAAGGGTTATTGTCTTGCCGGTGAGGGTCTTGACAAATATCTGCAT 529951
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || || | ||| | || | ||| ||||||||||| || || || || ||||| ||
Sbjct 665938 CCACCCCTAAGACGAAGCACGAGATGTAGGGTAGATTCCTTCTGGATGTTATAATCAGCA 665997
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| || | || || || |||||||||| | || || || || |||
Sbjct 665998 AGGGTACGGCCATCCTCAAGCTGTTTTCCAGCAAATATCAGCCTTTGCTGGTCCGGGGGA 666057
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||| || || || || ||||| || || | |||| ||||||||| | |||||
Sbjct 666058 ATGCCCTCCTTGTCCTGGATTTTAGCCTTCACGTTGTCTATAGTGTCAGAGCTCTCCACC 666117
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| |||| || || || || | || || ||||||||||||||
Sbjct 666118 TCAAGGGTGATGGTCTTTCCAGTAAGGGTCTTGACAAATATCTGCAT 666164
Score = 109 bits (120), Expect = 4e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| ||||| || || || |||||||| || | || | | |||| || | ||
Sbjct 665506 TGGAGGGTGGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGT 665565
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || || | | ||| ||||| ||||| || || ||||| || ||||| |||
Sbjct 665566 TTTCCAGCGAAGATGAGCCTCTGCTGATCTGGCGGTATCCCCTCTTTGTCCTGAATCTTT 665625
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| || | ||||| |||||||||| ||||| || ||
Sbjct 665626 GCCTTCACGTTATCAATTGTGTCTGAACTCTCCACCTCAAGAGTGATAGTTTTCCCAGTA 665685
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| ||||||||||||||
Sbjct 665686 AGTGTTTTCACAAATATCTGCAT 665708
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|||||||||||||| || || || ||||| ||||| | || | || || || | |||
Sbjct 531065 TGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTACGAGCGTCCTCAAGCTGC 531006
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| || || ||||| | || || || || | || || || || || || || ||
Sbjct 531005 TTACCGGCGAAGATCAACCTTTGCTGGTCCGGTGAAAGTCCCTCCTTGTCCTGGATCTTC 530946
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || || || || |||||||| | ||||| || || || | || ||||| ||
Sbjct 530945 GACTTCACTATCTCGACGGTGTCAGAGCTCTCCACCTCGAGGGTAATAGTCTTGCCAGTG 530886
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| ||||| ||||||||
Sbjct 530885 AGGGTTTTGACAAAAATCTGCAT 530863
>seq202
Length=4793652
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| || | || || || | ||| |||||||| || || || || || ||||| ||
Sbjct 4328796 CCTCCCCTGAGTCGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCTGCA 4328737
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| || | ||||| || ||||| || || | ||| || || || |||
Sbjct 4328736 AGTGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGAGGA 4328677
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||||||||| || || || || || ||| | |||| ||||| || | || |||
Sbjct 4328676 ATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCAACT 4328617
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||||||||| ||| || || |||| || || ||||| ||||||||
Sbjct 4328616 TCAAGAGTGATCGTCTTACCAGTTAGGGTCTTCACAAAAATCTGCAT 4328570
Score = 125 bits (138), Expect = 6e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
|||||| |||||||| || || |||||||| || || | || | |||| || | ||
Sbjct 4329324 ATGAAGAGTAGATTCCTTCTGAATATTGTAGTCCGCAAGGGTGCGACCATCCTCAAGCTG 4329265
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|||||| ||||| || | ||||| || || || ||||| || || |||||||| |||||
Sbjct 4329264 CTTACCAGCAAAAATGAGGCGCTGCTGGTCCGGTGGAATCCCCTCCTTATCTTGGATTTT 4329205
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| | || | |||||| || | || |||||||| |||| || || || ||
Sbjct 4329204 AGCCTTAACATTGTCAATAGTGTCGGAGCTCTCAACTTCAAGTGTGATTGTCTTTCCAGT 4329145
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| ||||| ||||||||||||||
Sbjct 4329144 GAGGGTTTTCACAAATATCTGCAT 4329121
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| ||||| || || || |||||||| || | || | | |||| || | |||
Sbjct 4329000 TGGAGGGTGGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGC 4328941
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| || | | || || || || || ||||||||||| || || || ||
Sbjct 4328940 TTCCCAGCAAAGATAAGTCTTTGCTGGTCCGGAGGGATGCCTTCTTTGTCCTGTATCTTA 4328881
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | |||||||| | || ||||||||||||| || ||||||||
Sbjct 4328880 GCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACTTCAAGAGTGATTGTCTTGCCGGTA 4328821
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || || || ||||||||
Sbjct 4328820 AGCGTCTTCACGAAAATCTGCAT 4328798
>seq2
Length=81761211
Score = 120 bits (132), Expect = 2e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || || || || || ||||| |||||||| || | || | |||| |||| ||
Sbjct 19641163 ATGGAGAGTGGACTCCTTCTGTATGTTGTAATCAGCAAGGGTGCGACCATCCTCCAGCTG 19641222
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || ||||| |||| | ||||||||| || ||||||||||| ||||| || || ||
Sbjct 19641223 CTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAGGAATGCCTTCCTTATCCTGGATCTT 19641282
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
| || || | || | |||||||| ||||||| ||||| |||| || ||||||||
Sbjct 19641283 TGCATTCACGTTGTCGATGGTGTCAGAACTTTCCACCTCAAGGGTGATAGTCTTGCCGGT 19641342
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| || || ||||| || | |||
Sbjct 19641343 AAGAGACTTAACAAAGATTTTCAT 19641366
>seq640
Length=221176
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| | ||||| || ||||| || || |||||||||||||||| || | | |
Sbjct 161956 ACGGAGAACGAGGTGAAGCGTCGATTCCTTCTGAATATTGTAATCGGCGAGGGTACGGCC 162015
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | ||||| || ||||| || || ||||| ||||| || |||||||| || ||
Sbjct 162016 GTCCTCAAGCTGCTTCCCAGCAAAGATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTT 162075
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| ||||| || ||| || | || | ||||| || | ||||| || || ||||
Sbjct 162076 GTCCTGAATCTTCGCTTTAACGTTGTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGAT 162135
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || |||| ||||| || || || |||||
Sbjct 162136 TGTCTTCCCCGTTAGGGTTTTGACGAAGATTTGCAT 162171
>seq921
Length=516242
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| || | ||| | ||| | || || ||| | || || || || ||||| || ||
Sbjct 186615 CCTCCCCTCAGACGGAGAACAAGGTGGAGTGTAAACTCCTTCTGGATGTTGTAGTCTGCA 186674
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| |||| ||||| || || || ||||| | || ||||| || ||
Sbjct 186675 AGGGTACGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAACCTTTGCTGATCTGGAGGG 186734
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||| ||||||||||||||||| || || | || | ||||| || |||| ||
Sbjct 186735 ATGCCCTCTTTATCTTGAATTTTGGCCTTCACTTTGTCGATGGTGTCTGAGCTTTCAACC 186794
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||| || || ||||| | ||| || ||||| ||||||||
Sbjct 186795 TCTAGGGTGATAGTCTTACCGGTGAGAGTCTTCACAAAGATCTGCAT 186841
>seq258
Length=1945713
Score = 93.3 bits (102), Expect = 3e-14
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| ||||| | | ||||||||||| || || || || || || || |||||||| |
Sbjct 1660560 TTCCACCTCTAAGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCTG 1660501
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| | || | |||| || || || || || ||||| |||||||| |||||||| || |
Sbjct 1660500 CTAAGGTCCGACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGTTGTTGATCAGGTG 1660441
Query 101361 GAATGCCTTCTTTATCTTG 101379
|||||||||| || || ||
Sbjct 1660440 GAATGCCTTCCTTGTCCTG 1660422
>seq700
Length=617226
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || || || || ||||| || || || | ||| | |||| || | |||
Sbjct 335071 TGGAGGGTCGACTCCTTCTGGATATTATAGTCAGCTAGAGTGCGTCCATCCTCGAGCTGC 335012
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || || | || || || || || ||||||||||| || || || || ||
Sbjct 335011 TTTCCGGCGAAGATAAGGCGTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTG 334952
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| || | ||||| || || |||| ||| || || |||
Sbjct 334951 GCCTTAACGTTGTCAATGGTGTCGGATGACTCCACCTCCAGGGTGATCGTCTTCCCCGTT 334892
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| |||||||| || ||||||||
Sbjct 334891 AGGGTTTTTACGAAGATCTGCAT 334869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395845741261488
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