Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_019443.1
Length=172879
Score E
Sequences producing significant alignments: (Bits) Value
seq89584 618 5e-172
seq2 286 4e-72
seq374 282 5e-71
seq64191 223 4e-53
seq767 93.3 5e-14
>seq89584
Length=148959
Score = 618 bits (684), Expect = 5e-172
Identities = 733/990 (74%), Gaps = 10/990 (1%)
Strand=Plus/Minus
Query 162502 TGTAACTGGGTCACCTCAGT--TGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGA 162559
|| |||||| | ||| ||| ||| || || | || |||| ||||| ||||| ||||
Sbjct 1134 TGCAACTGGATTACC--AGTACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGA 1077
Query 162560 TGATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTC 162619
|||||||| || | | ||| | || || |||||||| |||||||| || ||||
Sbjct 1076 TGATCCCTACTTTATTGACCGCAACTTCTGTATTTATCATTGCCTTCATTGCTGCCCCTC 1017
Query 162620 CAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACA 162679
|||| ||||| |||||||| | ||||||||| | || || || || ||||| ||||| |
Sbjct 1016 CAGTCGATATTGATGGTATTCGTGAACCTGTTTCTGGGTCTCTACTTTATGGAAACAATA 957
Query 162680 TCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCT 162739
| ||||| ||||| | |||||| ||| ||||| ||| | || || || || || |
Sbjct 956 TTATCTCAGGTGCCATTATTCCTACTTCCGCAGCTATAGGTTTGCATTTTTACCCAATAT 897
Query 162740 GGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCT 162799
||||||||||| || ||||||||||||| || ||||| || |||| ||||| | ||
Sbjct 896 GGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTTATTGTTC 837
Query 162800 TCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCT 162859
| ||||| | | || | | ||| |||||| ||||||||||| || |||
Sbjct 836 TACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTC 777
Query 162860 TAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTG 162919
| |||||||| |||||||| ||||||||| || || || || | || || ||||
Sbjct 776 TGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACAGCTG 717
Query 162920 TGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTT 162979
| |||||| |||| ||| | |||||||| ||||||||| | |||||| | || || |
Sbjct 716 TTTTCTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATAT 657
Query 162980 CTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCT 163039
|||||||||| |||| |||| | || ||||| |||||||||||||| || ||||| || |
Sbjct 656 CTGGTACTTTCAACTTCATGATTGTATTCCAGGCAGAGCACAACATTCTTATGCATCCAT 597
Query 163040 TCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTT 163099
| || ||| | || || || ||||||||||| ||||| || || ||||||||||| ||||
Sbjct 596 TTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTT 537
Query 163100 CTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTT 163159
|| | || |||||| | | ||||| ||||| ||||| | ||||| || | ||||
Sbjct 536 CTTTGGTAACTTCTAGTTTAATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTT 477
Query 163160 ATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTC 163219
| | || || ||||| ||||| || || || ||||| || |||||||| || ||||| |
Sbjct 476 ACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTTGGCC 417
Query 163220 GCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTG 163279
| ||||||||||| ||||| ||||||||| || ||||| | || |||||| | ||||
Sbjct 416 GATTGATCTTCCAATATGCTAGTTTCAACAATTCCCGTTCCTTGCATTTCTTCTTGGCTG 357
Query 163280 CATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACC 163339
| | ||||| || | |||||||||||||| ||||| | |||||||| ||||||
Sbjct 356 CTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTGGGTATTAGTACTATGGCGTTCAACT 297
Query 163340 TTAACGGTTTCAACTTCAACCAATCCGTCGTTGA---CGCAGGTGGTAAAGTGATTCCTA 163396
| |||||||| || || ||||||||||| ||||| | |||| || || ||| |
Sbjct 296 TGAACGGTTTTAATTTTAACCAATCCGTAGTTGATAGCCAAGGTCGT---GTTATTAACA 240
Query 163397 CTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATG 163456
||||||| |||||| | || | || |||||||||||||| ||||| || |||||||
Sbjct 239 CTTGGGCTGATATCATAAATCGTGCTAATCTTGGTATGGAAGTAATGCATGAACGTAATG 180
Query 163457 CTCACAACTTCCCACTTGACCTTGCTGCTG 163486
| ||||||||||| || || || ||| |||
Sbjct 179 CACACAACTTCCCTCTAGATCTAGCTTCTG 150
>seq2
Length=81761211
Score = 286 bits (316), Expect = 4e-72
Identities = 318/423 (75%), Gaps = 6/423 (1%)
Strand=Plus/Plus
Query 163067 TCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAG 163126
|||| ||||| || || ||||||||||| |||||| | || |||||| | | ||||| |
Sbjct 48005766 TCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTAATCAGGG 48005825
Query 163127 AAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTT 163186
|||| ||||| | ||||| || | ||||| | || || ||||| ||||| || |
Sbjct 48005826 AAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCT 48005885
Query 163187 ACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCA 163246
| || ||||| || |||||||| || ||||| || ||||||||||| ||||| |||||
Sbjct 48005886 ATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCA 48005945
Query 163247 ACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCA 163306
|||| || ||||| | || |||||| | ||||| | ||||| || | ||||||||||
Sbjct 48005946 ACAATTCCCGTTCCTTGCATTTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGGTTCA 48006005
Query 163307 CTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCG 163366
|||| ||||| | |||||||| |||||| | |||||||| || || ||||||||||
Sbjct 48006006 CTGCTTTGGGTATTAGTACTATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAATCCG 48006065
Query 163367 TCGTTGA---CGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAG 163423
| ||||| | |||| || || ||| |||||||| |||||| | || | ||
Sbjct 48006066 TAGTTGATAGCCAAGGTCGT---GTTATTAACACTTGGGCTGATATCATAAATCGTGCTA 48006122
Query 163424 GACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTG 163483
|||||||||||||| ||||| || |||||||| ||||||||||| || || || |||
Sbjct 48006123 ATCTTGGTATGGAAGTAATGCATGAACGTAATGCACACAACTTCCCTCTAGATCTAGCTT 48006182
Query 163484 CTG 163486
|||
Sbjct 48006183 CTG 48006185
>seq374
Length=1248919
Score = 282 bits (312), Expect = 5e-71
Identities = 316/421 (75%), Gaps = 6/421 (1%)
Strand=Plus/Plus
Query 163069 GGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAA 163128
|| ||||| || || ||||||||||| |||||| | || |||||| | | ||||| |||
Sbjct 600774 GGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTAATCAGGGAA 600833
Query 163129 ACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTAC 163188
|| ||||| | ||||| || | ||||| | || || ||||| ||||| || ||
Sbjct 600834 ACCACTGAAAATGAGTCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTAT 600893
Query 163189 AACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAAC 163248
|| ||||| || |||||||| || ||||| || ||||||||||| ||||| |||||||
Sbjct 600894 AATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAAC 600953
Query 163249 AACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACT 163308
|| || ||||| | || |||||| | ||||| | ||||| || | ||||||||||||
Sbjct 600954 AATTCCCGTTCCTTGCATTTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGGTTCACT 601013
Query 163309 GCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTC 163368
|| ||||| | |||||||| |||||| | |||||||| || || |||||||||||
Sbjct 601014 GCTTTGGGTATTAGTACTATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAATCCGTA 601073
Query 163369 GTTGA---CGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGA 163425
||||| | |||| || || ||| |||||||| |||||| | || | ||
Sbjct 601074 GTTGATAGCCAAGGTCGT---GTTATTAACACTTGGGCTGATATCATAAATCGTGCTAAT 601130
Query 163426 CTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 163485
|||||||||||||| ||||| || |||||||| ||||||||||| || || || ||| ||
Sbjct 601131 CTTGGTATGGAAGTAATGCATGAACGTAATGCACACAACTTCCCTCTAGATCTAGCTTCT 601190
Query 163486 G 163486
|
Sbjct 601191 G 601191
>seq64191
Length=168564
Score = 223 bits (246), Expect = 4e-53
Identities = 346/490 (71%), Gaps = 6/490 (1%)
Strand=Plus/Plus
Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTT--GC-TTCA 162595
|||| || || ||| | |||||||||||| ||| | | | ||||||| || || |
Sbjct 58596 TCGGATGATTTGGTATTTTGATGATCCCTA-CTTTATTGA--CCGCAACTTATGCATTTA 58652
Query 162596 TCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAG 162655
||||||| |||||||| || |||||| ||||| |||||||| | ||||||||| | |
Sbjct 58653 TCATTGCCTTCATTGCTGCCTCTCCAGCCGATATTGATGGTATTCGTGAACCTGTTTCTG 58712
Query 162656 GTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTA 162715
| || || || ||||| ||||| || ||||| ||| | |||||| ||| ||||
Sbjct 58713 GGTCTCTACTTTATGGAAACAATATTATCTCAAGTGTCATTATTCCTACTTCCGCAGCTA 58772
Query 162716 TTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATG 162775
| ||| | || || || || || ||||||| || | || ||||||||||||| || ||
Sbjct 58773 TAGGTTTGCATTTTTACCCAATATGGGAAGTAGAATCTGTTGATGAGTGGTTATACAACA 58832
Query 162776 GTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTC 162835
|| |||| ||||| | || | |||| | | || | | ||| ||||
Sbjct 58833 ACGGTCCTTATGAACTTATTGTTCTATACTTTTTACTTGGTGTAGCTTGTTACATGGGTC 58892
Query 162836 GTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTG 162895
|| ||||||||||| || ||| | |||||| | |||||||| ||||||||| || |
Sbjct 58893 GTGAGTGGGAACTTAGTTTCCGTCTGGGTATGTGCCCTTGGATTGCTGTTGCATATTCAG 58952
Query 162896 CACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCT 162955
| || || | || || |||| | |||| |||| ||| | || ||||| |||||
Sbjct 58953 CTCCTGTTGCGGCTGCTACAACTGTTTACTTGATCTACCCTATTGGCCAAGGAAGTTTCT 59012
Query 162956 CTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAG 163015
|||| | |||||| | || || ||||||| ||| |||| |||| | || | ||| |||
Sbjct 59013 CTGATGGTATGCCTTTAGGAATATCTGGTAATTTCAACTTCATGATTGTATGCCAGTCAG 59072
Query 163016 AGCACAACAT 163025
||||||||||
Sbjct 59073 AGCACAACAT 59082
>seq767
Length=205183
Score = 93.3 bits (102), Expect = 5e-14
Identities = 120/165 (73%), Gaps = 2/165 (1%)
Strand=Plus/Plus
Query 162604 TTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTT 162663
||| |||| || |||||||||||||| |||||||| | ||| ||||| | || | |||
Sbjct 188079 TTCCTTGCTGCCCCTCCAGTTGATATTGATGGTATTCGTGAATCTGTTTCTGGGTGTCTT 188138
Query 162664 --CTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTC 162721
|| ||||| |||||||| ||||| |||| | ||| || ||| ||||| |||
Sbjct 188139 TACTTTATGGAAACAACATTATCTCAGGTGTCATTATTCTTACTTCTGCAGCTATAGGTT 188198
Query 162722 TTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGT 162766
| | || || || || || |||||| || || || ||||||||
Sbjct 188199 TGCTTTTTTACCCAATATGAGAAGCAACATCTGCTGTTGAGTGGT 188243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552465455640960
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