Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq36 152 1e-31 seq293 104 4e-17 >seq36 Length=6822877 Score = 152 bits (168), Expect = 1e-31 Identities = 426/649 (66%), Gaps = 11/649 (2%) Strand=Plus/Plus Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGG 48099 ||||||| ||||||| | || || || | ||||||| |||| | ||| ||| | Sbjct 1783515 AAACTCCCTCTCTATATCTACAGCATCAGCAACAATCTCTCTAACCCTATCCTCAGAGAG 1783574 Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 || || || | || || |||| || |||||||| | ||||| ||| || || Sbjct 1783575 CTTATTATTGAGCAGACTG---TACAGCAGACACGCAAAGTCACAGTGCAGGCCCTCATC 1783631 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 || || ||| ||||||| || |||||||||||| | ||| |||| || ||||| Sbjct 1783632 ACGAGAAATAAGCTCGTTGGAAAAAGTGAGACCAGGCATTAGCCCTCTCTTCTTCAGCCA 1783691 Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279 ||| || || |||| |||||||||||||||||||| || || || || | Sbjct 1783692 GAAGATGGCGCAGAAACTACCAGAGAAGAAGATGCCCTCAACGCAAGCAAATGCAAGAAT 1783751 Query 48280 CCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 | |||| | |||||| || ||| ||||||| || ||||| | |||||| Sbjct 1783752 TCGCTCTGCAAAAGAATCGGAGGCGTC---GATCCAGCGGAGAGCCCACTGTGCCTTGCG 1783808 Query 48340 CTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGC 48399 || ||| || | ||||| || || ||||||| | | ||| | | ||| Sbjct 1783809 GGCGACGCAGGGAACGGTCTCGATAGCATGGAAGAGGTGCGATTTCTCTGCGGAGTCTTT 1783868 Query 48400 AACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTG 48459 | ||||| ||| ||| ||||||||| ||||| | || || || |||||||| Sbjct 1783869 GATGTAGGTTTCGAGAAGCAGGCTGTACATCTCGGAGTGGATGTTTTCGATGGCGATCTG 1783928 Query 48460 GAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-A 48518 || || ||||| || | ||||| | ||| || || ||| | ||||| | Sbjct 1783929 AAATCCATAGAAAGCGCGCGCCTCCGGGAGCTGTACCTCCCGCATGAAGC-GGCCAGCGA 1783987 Query 48519 GATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAAT 48578 | ||||| || || || || ||||| || ||||| || || || || | | ||||| Sbjct 1783988 GGTTCTCTAGAACGATTCCGTCGGAAGCGGCGAAGAAAGCGAGAACGTGGGTTACGAAAT 1784047 Query 48579 GGCGCTCGTTGTGGGTGAGAG---CATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTT 48635 | || |||| | |||||| | |||||||| | | |||| | ||| || |||| Sbjct 1784048 GCCGTTCGTCGGAGGTGAGGGATTCATTCCAGTGGCGGAGATCTTGGGACAGATCAACTT 1784107 Query 48636 CTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 |||| | |||||||| || || ||||| |||||||| |||| || Sbjct 1784108 CTTCTGCTGTCCAGAAAGAGGCTTCGGCTTTCTTGTACATCTCCCAGAT 1784156 >seq293 Length=413263 Score = 104 bits (114), Expect = 4e-17 Identities = 366/568 (64%), Gaps = 8/568 (1%) Strand=Plus/Minus Query 48121 ATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGA 48180 ||| || | ||| |||||||| | ||| | || ||||| || ||||||| |||| || Sbjct 227107 ATACAGAAGGCAAGCAAAGTCGCAGTGGAGTCCCTCGTCACGAGAGATGAGCTCGTTAGA 227048 Query 48181 GAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCC 48240 || |||||| ||||| | || | || ||||||||||| || || ||| ||| Sbjct 227047 AAAAGTGAGACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGCC 226988 Query 48241 AGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTT 48300 |||||||| || || || || ||| || ||| | || ||| | || || | Sbjct 226987 GGAGAAGAAAATACCTTCGACGCACGCAAAAGCGAGAATCCGCTCAGCAAATGATTCAGA 226928 Query 48301 CTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360 ||| |||||| || ||||| | ||||| || ||| || | || || Sbjct 226927 GGCGTCA---ATCCAGCGCAGTGCCCACTGAGCCTTACGGGCGACGCAGGGTACGGTTTC 226871 Query 48361 TATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTT 48420 ||||| || || || || || | |||| | ||||| ||| || Sbjct 226870 GATGGCGCGAAAAAGATTGGATTTTTCGGTGGAGTCCTTGATGTAGGTCTCGAGGAGAAG 226811 Query 48421 TGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGC 48480 |||||||| ||||| | || || || ||||||||||| || ||||| || | || Sbjct 226810 ACTATACATCTCGGAGTGAATGTTTTCGATGGCGATCTGGAAGCCATAGAAAGCGCGCGC 226751 Query 48481 CTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCAT 48539 ||| | || || ||| ||| | ||| || || ||||| || || |||| Sbjct 226750 CTCCGGAAGTTGAACCTCTCGCATGAAGC-GTCCGGCGAGGTTCTCCAGCACGATACCAT 226692 Query 48540 CTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAG 48599 | ||||| || |||||||| ||||| | | | || |||||||||| |||||| | Sbjct 226691 CAGAAGCGGCGAAGAAGGCCAGGACGTAGGTGATAAAGTGGCGCTCGTCAGAGGTGAGGG 226632 Query 48600 ---CATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG 48656 || ||| | | ||||||| || || || |||||| |||||||||| || | Sbjct 226631 TGTGATCCCATTGCCGAACGTCTTGTGAGAGATCGACCTCTTCCGCAGTCCAGAAAGAGG 226572 Query 48657 CGAGTGCTTTTTTGTACATGCCCCATAT 48684 | |||||| |||||||| |||| || Sbjct 226571 CCTCTGCTTTCTTGTACATCTCCCAAAT 226544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930489669570560