Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq36 140 6e-28 seq293 134 3e-26 >seq36 Length=6822877 Score = 140 bits (154), Expect = 6e-28 Identities = 378/571 (66%), Gaps = 12/571 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||||||||||||||| || || ||| |||||| || ||||| |||||||| Sbjct 1784156 ATCTGGGAGATGTACAAGAAAGCCGAAGCCTCTTTCTGGACAGCAGAAGAAGTTGATCTG 1784097 Query 25537 GCCAAGGACATGGACGGCTGGTACG---CTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 || | || | | |||| | | | || || ||||| | |||||| | | Sbjct 1784096 TCCCAAGATCTCCGCCACTGGAATGAATCCCTCACCTCCGACGAACGGCATTTCGTAACC 1784037 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || || || || || || || ||||| || | | Sbjct 1784036 CACGTTCTCGCTTTCTTCGCCGCTTCCGACGGAATCGTTCTAGAGAACCTCGCTGGCCGC 1783977 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| |||| || ||| | |||||| |||||| || || ||||| |||||| Sbjct 1783976 TTCATGCGGGAGGTACAGCTCCCGGAGGCGCGCGCTTTCTATGGATTTCAGATCGCCATC 1783917 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 ||||| | ||||| ||| |||| | |||||| || ||||| | |||| ||| Sbjct 1783916 GAAAACATCCACTCCGAGATGTACAGCCTGCTTCTCGAAACCTACATCAAAGACTCCGC- 1783858 Query 25774 GAGAGAGATCGG--CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGC 25831 ||||| |||| || || ||| |||||| | | ||| || || | ||||| | Sbjct 1783857 -AGAGAAATCGCACCTCTTCCATGCTATCGAGACCGTTCCCTGCGTCGCCCGCAAGGCAC 1783799 Query 25832 GGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCT 25891 |||||| | |||||| || ||| || | | |||| ||||| | | || | Sbjct 1783798 AGTGGGCTCTCCGCTGGATCGAC-GCCTC--CGATTCTTTTGCAGAGCGAATTCTTGCAT 1783742 Query 25892 TTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTCAAG 25950 ||||| || ||||||||||| ||| ||| || |||| ||||||||||||| ||| Sbjct 1783741 TTGCTTGCGTTGAGGGCATCTTCTTCTCTGGTAGTTTCTGCG-CCATCTTCTGGCTGAAG 1783683 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 ||| ||| ||||| || || |||||||||||||| || | || ||||| Sbjct 1783682 AAGAGAGGGCTAATGCCTGGTCTCACTTTTTCCAACGAGCTTATTTCTCGTGATGAGGGC 1783623 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 || ||| | || ||||| || ||||| |||| Sbjct 1783622 CTGCACTGTGACTTTGCGTGTCTGCTGTACA 1783592 >seq293 Length=413263 Score = 134 bits (148), Expect = 3e-26 Identities = 383/575 (67%), Gaps = 24/575 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||||||||||||||| || | ||| |||||| || |||||| | ||||| Sbjct 226544 ATTTGGGAGATGTACAAGAAAGCAGAGGCCTCTTTCTGGACTGCGGAAGAGGTCGATCTC 226603 Query 25537 GCCAAGGACATGGACGGC--TGGTA---CGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 | | ||| | |||| ||| | | | || || ||||||| || ||| ||| Sbjct 226604 TCACAAGACGTT--CGGCAATGGGATCACACCCTCACCTCTGACGAGCGCCACTTTATCA 226661 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 ||||| |||| ||||| || || ||||||||||| ||| ||||| || || Sbjct 226662 CCTACGTCCTGGCCTTCTTCGCCGCTTCTGATGGTATCGTGCTGGAGAACCTCGCCGGAC 226721 Query 25652 GATTCACCAGGGAAGTGCAGTACGT--GGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 | |||| | || || || || | |||||| |||||| || |||||||| || Sbjct 226722 GCTTCATGCGAGAGGTTCA--ACTTCCGGAGGCGCGCGCTTTCTATGGCTTCCAGATCGC 226779 Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGA 25766 ||||||||| | ||||| ||| ||||| | ||||| | ||| ||||| | || Sbjct 226780 CATCGAAAACATTCACTCCGAGATGTAT---AGTCTTCTCCTCGAGACCTACATCAAGGA 226836 Query 25767 CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 | | |||| | | || ||| | |||||||| | ||||| || || | || Sbjct 226837 CTCCACCGAAAAATCCAATCTTTTTCGCGCCATCGAAACCGTACCCTGCGTCGCCCGTAA 226896 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGT 25886 ||| | |||||| || ||||| || ||| | | |||| |||||| | | Sbjct 226897 GGCTCAGTGGGCACTGCGCTGGATTGAC-GCCTCTGAATCA--TTTGCTGAGCGGATTCT 226953 Query 25887 AGCCTTTGC-TGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGG 25944 || ||||| ||| || || || || || ||| ||| || |||| ||||||||||| Sbjct 226954 CGCTTTTGCGTGC-GTCGAAGGTATTTTCTTCTCCGGCAGCTTCTGCG-CCATCTTCTGG 227011 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| || || ||||| || || ||||| |||||||||||| | ||| Sbjct 227012 CTCAAGAAGCGCGGTTTGATGCCAGGTCTCACTTTTTCTAACGAGCTCATCTCTCGTGAC 227071 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039 ||||| |||||| | || ||||| ||||| || || Sbjct 227072 GAGGGACTCCACTGCGACTTTGCTTGCCTTCTGTA 227106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927804679592960