Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq36 140 6e-28
seq293 134 3e-26
>seq36
Length=6822877
Score = 140 bits (154), Expect = 6e-28
Identities = 378/571 (66%), Gaps = 12/571 (2%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||||||||||||||||| || || ||| |||||| || ||||| ||||||||
Sbjct 1784156 ATCTGGGAGATGTACAAGAAAGCCGAAGCCTCTTTCTGGACAGCAGAAGAAGTTGATCTG 1784097
Query 25537 GCCAAGGACATGGACGGCTGGTACG---CTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593
|| | || | | |||| | | | || || ||||| | |||||| | |
Sbjct 1784096 TCCCAAGATCTCCGCCACTGGAATGAATCCCTCACCTCCGACGAACGGCATTTCGTAACC 1784037
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| | || ||||| || || || || || || || ||||| || | |
Sbjct 1784036 CACGTTCTCGCTTTCTTCGCCGCTTCCGACGGAATCGTTCTAGAGAACCTCGCTGGCCGC 1783977
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| |||| || ||| | |||||| |||||| || || ||||| ||||||
Sbjct 1783976 TTCATGCGGGAGGTACAGCTCCCGGAGGCGCGCGCTTTCTATGGATTTCAGATCGCCATC 1783917
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773
||||| | ||||| ||| |||| | |||||| || ||||| | |||| |||
Sbjct 1783916 GAAAACATCCACTCCGAGATGTACAGCCTGCTTCTCGAAACCTACATCAAAGACTCCGC- 1783858
Query 25774 GAGAGAGATCGG--CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGC 25831
||||| |||| || || ||| |||||| | | ||| || || | ||||| |
Sbjct 1783857 -AGAGAAATCGCACCTCTTCCATGCTATCGAGACCGTTCCCTGCGTCGCCCGCAAGGCAC 1783799
Query 25832 GGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCT 25891
|||||| | |||||| || ||| || | | |||| ||||| | | || |
Sbjct 1783798 AGTGGGCTCTCCGCTGGATCGAC-GCCTC--CGATTCTTTTGCAGAGCGAATTCTTGCAT 1783742
Query 25892 TTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTCAAG 25950
||||| || ||||||||||| ||| ||| || |||| ||||||||||||| |||
Sbjct 1783741 TTGCTTGCGTTGAGGGCATCTTCTTCTCTGGTAGTTTCTGCG-CCATCTTCTGGCTGAAG 1783683
Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010
||| ||| ||||| || || |||||||||||||| || | || |||||
Sbjct 1783682 AAGAGAGGGCTAATGCCTGGTCTCACTTTTTCCAACGAGCTTATTTCTCGTGATGAGGGC 1783623
Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041
|| ||| | || ||||| || ||||| ||||
Sbjct 1783622 CTGCACTGTGACTTTGCGTGTCTGCTGTACA 1783592
>seq293
Length=413263
Score = 134 bits (148), Expect = 3e-26
Identities = 383/575 (67%), Gaps = 24/575 (4%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||||||||||||||||| || | ||| |||||| || |||||| | |||||
Sbjct 226544 ATTTGGGAGATGTACAAGAAAGCAGAGGCCTCTTTCTGGACTGCGGAAGAGGTCGATCTC 226603
Query 25537 GCCAAGGACATGGACGGC--TGGTA---CGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591
| | ||| | |||| ||| | | | || || ||||||| || ||| |||
Sbjct 226604 TCACAAGACGTT--CGGCAATGGGATCACACCCTCACCTCTGACGAGCGCCACTTTATCA 226661
Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651
||||| |||| ||||| || || ||||||||||| ||| ||||| || ||
Sbjct 226662 CCTACGTCCTGGCCTTCTTCGCCGCTTCTGATGGTATCGTGCTGGAGAACCTCGCCGGAC 226721
Query 25652 GATTCACCAGGGAAGTGCAGTACGT--GGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709
| |||| | || || || || | |||||| |||||| || |||||||| ||
Sbjct 226722 GCTTCATGCGAGAGGTTCA--ACTTCCGGAGGCGCGCGCTTTCTATGGCTTCCAGATCGC 226779
Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGA 25766
||||||||| | ||||| ||| ||||| | ||||| | ||| ||||| | ||
Sbjct 226780 CATCGAAAACATTCACTCCGAGATGTAT---AGTCTTCTCCTCGAGACCTACATCAAGGA 226836
Query 25767 CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826
| | |||| | | || ||| | |||||||| | ||||| || || | ||
Sbjct 226837 CTCCACCGAAAAATCCAATCTTTTTCGCGCCATCGAAACCGTACCCTGCGTCGCCCGTAA 226896
Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGT 25886
||| | |||||| || ||||| || ||| | | |||| |||||| | |
Sbjct 226897 GGCTCAGTGGGCACTGCGCTGGATTGAC-GCCTCTGAATCA--TTTGCTGAGCGGATTCT 226953
Query 25887 AGCCTTTGC-TGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGG 25944
|| ||||| ||| || || || || || ||| ||| || |||| |||||||||||
Sbjct 226954 CGCTTTTGCGTGC-GTCGAAGGTATTTTCTTCTCCGGCAGCTTCTGCG-CCATCTTCTGG 227011
Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004
|||||| || || ||||| || || ||||| |||||||||||| | |||
Sbjct 227012 CTCAAGAAGCGCGGTTTGATGCCAGGTCTCACTTTTTCTAACGAGCTCATCTCTCGTGAC 227071
Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039
||||| |||||| | || ||||| ||||| || ||
Sbjct 227072 GAGGGACTCCACTGCGACTTTGCTTGCCTTCTGTA 227106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 927804679592960
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