Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_020835.1
Length=47325
Score E
Sequences producing significant alignments: (Bits) Value
seq89584 542 9e-150
seq64191 248 3e-61
seq374 190 6e-44
seq2 190 6e-44
seq767 80.6 8e-11
>seq89584
Length=148959
Score = 542 bits (600), Expect = 9e-150
Identities = 712/981 (73%), Gaps = 4/981 (0%)
Strand=Plus/Plus
Query 17832 GAAGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGG 17891
||||||| |||||| |||||||| || |||||||| || ||||| ||||| | |||||
Sbjct 152 GAAGCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATACCAAGA 211
Query 17892 TTAGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTG-CTACAAT 17950
||||| | || | | |||||||| || | || | ||| ||| | || |
Sbjct 212 TTAGCACGATTTATGATATCAGCCCAAGTGTTAATAACACGACCTTG-GCTATCAACTAC 270
Query 17951 GGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 18010
||||||||| || || || || || | || || |||||||| || |||| || ||
Sbjct 271 GGATTGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAAGCAGT 330
Query 18011 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTT 18070
| ||| || | || ||||||||||||||||||||||| | | | ||||||
Sbjct 331 GAACCAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAATTGTT 390
Query 18071 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATA 18130
|| |||||||| |||||||| | || ||||| || |||||||| || |||||||||||
Sbjct 391 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATA 450
Query 18131 CGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTC 18190
|| ||||| ||||| |||||| | || || | || ||||||| ||||| |||||
Sbjct 451 GGTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTC 510
Query 18191 TCTAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAA 18250
|| || | ||||| || | | || ||||||||| ||||| | || |||||
Sbjct 511 CCTGATTAAACTAGAAGTTACCAAAGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 570
Query 18251 TACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAA 18310
||| || || || || | ||| || || ||||||||||| || ||||| || || |||||
Sbjct 571 TACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATGTTGTGCTCTGCCTGGAA 630
Query 18311 TACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCC 18370
||| | |||||| ||||||||||| || || | ||||||||||||||||||||| ||
Sbjct 631 TACAATCATGAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 690
Query 18371 TTGTCCAAAAGGATA-AACGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGAATAAG 18429
||| |||| ||| || | | ||||| || | ||||| || || || || ||||| |
Sbjct 691 TTGACCAATAGGGTAGATCAAGAAA-ACAGCTGTAGCAGCCGCAACAGGAGCTGAATATG 749
Query 18430 CAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGT 18489
||||| |||||| ||||||||||| || | ||||||||||||| | || |||||||
Sbjct 750 CAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGT 809
Query 18490 AAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATA 18549
|| || | || | | |||||| | ||||| |||| ||| || || || || ||||
Sbjct 810 AACAAGCTACACCAAGTAAAAAGTGTAGAACAATAAGTTCATAAGGACCGCCATTGTATA 869
Query 18550 ACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAG 18609
||||||| || | | ||| |||||||| |||||||| || || | ||| || || |
Sbjct 870 ACCACTCATCAACAGATGCTGCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTGCGG 929
Query 18610 ATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAG 18669
| | || | || || ||||| || || ||||||||||| |||| | || || ||||
Sbjct 930 AAGTAGGAATAATGGCACCTGAGATAATATTGTTTCCATAAAGTAGAGACCCAGAAACAG 989
Query 18670 GCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTG 18729
| |||||||||||||| || || || ||||| ||||||| || ||||| | |||| | |
Sbjct 990 GTTCACGAATACCATCAATATCGACTGGAGGGGCAGCAATGAAGGCAATGATAAATACAG 1049
Query 18730 TAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGT 18789
|| |||||| || | | ||||||||| | || |||||||| || | ||| || ||||
Sbjct 1050 AAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGT 1109
Query 18790 TGTTTGTACTCGTAACCCAGT 18810
| | ||||| |||| |||||
Sbjct 1110 TTTCAGTACTGGTAATCCAGT 1130
>seq64191
Length=168564
Score = 248 bits (274), Expect = 3e-61
Identities = 363/511 (71%), Gaps = 2/511 (0%)
Strand=Plus/Minus
Query 18291 ATATTGTGTTCGGCTTGGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGC 18350
|| ||||| || | ||| |||| | |||||| |||||| |||| || || | ||||
Sbjct 59082 ATGTTGTGCTCTGACTGGCATACAATCATGAAGTTGAAATTACCAGATATTCCTAAAGGC 59023
Query 18351 ATACCATCAGAGAAACTCCCTTGTCCAAAAGGATAAA-CGAGAAATACTGAGAAGGCAGC 18409
||||||||||||||||| ||||| |||| ||| || | | || || || | |||||
Sbjct 59022 ATACCATCAGAGAAACTTCCTTGGCCAATAGGGTAGATCAAGTAA-ACAGTTGTAGCAGC 58964
Query 18410 TGCTACTGGTGCGGAATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAG 18469
|| || || || ||||| |||||| |||||| |||| |||||| || | |||||||
Sbjct 58963 CGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCACATACCCAGACGGAAACTAAG 58904
Query 18470 TTCCCATTGTCGTCCCATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTG 18529
|||||| | || ||||||||| || | || | | ||||| | ||||| ||||
Sbjct 58903 TTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAAAAGTATAGAACAATAAGTTC 58844
Query 18530 ATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAA 18589
||| || || ||| ||||||||||| || | | | | ||||||| |||||||| ||
Sbjct 58843 ATAAGGACCGTTGTTGTATAACCACTCATCAACAGATTCTACTTCCCATATTGGGTAAAA 58784
Query 18590 GTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATA 18649
|| | ||| || || || | || | || | | ||| || || |||||||||||
Sbjct 58783 ATGCAAACCTATAGCTGCGGAAGTAGGAATAATGACACTTGAGATAATATTGTTTCCATA 58724
Query 18650 GAGTAAGGCTCCTGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAAC 18709
|||| | || || ||||| |||||||||||||| || || | |||| |||||||
Sbjct 58723 AAGTAGAGACCCAGAAACAGGTTCACGAATACCATCAATATCGGCTGGAGAGGCAGCAAT 58664
Query 18710 AAATGCAATCAAAAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAA 18769
|| ||||| | |||||| || |||||| || | | ||||||||| | | |||||
Sbjct 58663 GAAGGCAATGATAAATGCATAAGTTGCGGTCAATAAAGTAGGGATCATCAAAATACCAAA 58604
Query 18770 CCACCCCACGTAGAGGCGGTTGTTTGTACTC 18800
|| || | ||| || ||||| || ||| ||
Sbjct 58603 TCATCCGATGTAAAGACGGTTTTTGGTAATC 58573
>seq374
Length=1248919
Score = 190 bits (210), Expect = 6e-44
Identities = 288/407 (71%), Gaps = 2/407 (0%)
Strand=Plus/Minus
Query 17832 GAAGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGG 17891
||||||| |||||| |||||||| || |||||||| || ||||| ||||| | |||||
Sbjct 601189 GAAGCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATACCAAGA 601130
Query 17892 TTAGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTG-CTACAAT 17950
||||| | || | | |||||||| || | || | ||| ||| | || |
Sbjct 601129 TTAGCACGATTTATGATATCAGCCCAAGTGTTAATAACACGACCTTG-GCTATCAACTAC 601071
Query 17951 GGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 18010
||||||||| || || || || || | || || |||||||| || |||| || ||
Sbjct 601070 GGATTGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAAGCAGT 601011
Query 18011 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTT 18070
| ||| || | || ||||||||||||||||||||||| | | | ||||||
Sbjct 601010 GAACCAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAATTGTT 600951
Query 18071 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATA 18130
|| |||||||| |||||||| | || ||||| || |||||||| || |||||||||||
Sbjct 600950 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATA 600891
Query 18131 CGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTC 18190
|| ||||| ||||| |||||| | || || | || ||||||| ||||| |||||
Sbjct 600890 GGTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTC 600831
Query 18191 TCTAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATA 18237
|| || | ||||| || | | || ||||||||| |||||
Sbjct 600830 CCTGATTAAACTAGAAGTTACCAAAGAACCATGCATAGCACTGAATA 600784
>seq2
Length=81761211
Score = 190 bits (210), Expect = 6e-44
Identities = 288/407 (71%), Gaps = 2/407 (0%)
Strand=Plus/Minus
Query 17832 GAAGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGG 17891
||||||| |||||| |||||||| || |||||||| || ||||| ||||| | |||||
Sbjct 48006183 GAAGCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATACCAAGA 48006124
Query 17892 TTAGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTG-CTACAAT 17950
||||| | || | | |||||||| || | || | ||| ||| | || |
Sbjct 48006123 TTAGCACGATTTATGATATCAGCCCAAGTGTTAATAACACGACCTTG-GCTATCAACTAC 48006065
Query 17951 GGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 18010
||||||||| || || || || || | || || |||||||| || |||| || ||
Sbjct 48006064 GGATTGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAAGCAGT 48006005
Query 18011 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTT 18070
| ||| || | || ||||||||||||||||||||||| | | | ||||||
Sbjct 48006004 GAACCAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAATTGTT 48005945
Query 18071 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATA 18130
|| |||||||| |||||||| | || ||||| || |||||||| || |||||||||||
Sbjct 48005944 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATA 48005885
Query 18131 CGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTC 18190
|| ||||| ||||| |||||| | || || | || ||||||| ||||| |||||
Sbjct 48005884 GGTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTC 48005825
Query 18191 TCTAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATA 18237
|| || | ||||| || | | || ||||||||| |||||
Sbjct 48005824 CCTGATTAAACTAGAAGTTACCAAAGAACCATGCATAGCACTGAATA 48005778
Score = 104 bits (114), Expect = 7e-18
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 18405 GCAGCTGCTACTGGTGCGGAATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAA 18464
||||| || || || || ||||| |||||| |||||| ||| ||||||| | ||
Sbjct 22128664 GCAGCCGCAACAGGAGCTGAATATGCAACAACAATCCAAGGGTGCATACCCTGATGGAAA 22128605
Query 18465 CTAAGTTCCCATTGTCGTCCCATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATG 18524
||||||||||| | || ||||||||| || | || || | |||||| | |||||
Sbjct 22128604 CTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAATTAAAAAGTGTAGAACAATA 22128545
Query 18525 AGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGG 18584
| || ||| || || || || ||||||||||| || | | || |||||||| |||| |
Sbjct 22128544 ATTTCATAAGGACCGCCATTGTATAACCACTCATCAATAGATGTTGCTTCCCATATTGAG 22128485
Query 18585 TA 18586
||
Sbjct 22128484 TA 22128483
>seq767
Length=205183
Score = 80.6 bits (88), Expect = 8e-11
Identities = 103/141 (73%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 18570 GCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCT 18629
||||| || |||||||| || | | ||| || || ||| | | | || | |||
Sbjct 188223 GCTTCTCATATTGGGTAAAAAAGCAAACCTATAGCTGCAGAAGTAAGAATAATGACACCT 188164
Query 18630 GATATGATGTTGTTTCCATAGAGTAAGGCT--CCTGAGACAGGCTCACGAATACCATCTA 18687
|| || |||||||||||||| ||||| | || || |||| |||||||||||||| |
Sbjct 188163 GAGATAATGTTGTTTCCATAAAGTAAAGACACCCAGAAACAGATTCACGAATACCATCAA 188104
Query 18688 TGTCAACGGGAGGAGCAGCAA 18708
| ||||| ||||| |||||||
Sbjct 188103 TATCAACTGGAGGGGCAGCAA 188083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151157425972896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |