Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_020838.1
Length=45728
Score E
Sequences producing significant alignments: (Bits) Value
seq89584 509 5e-140
seq374 235 2e-57
seq2 235 2e-57
seq64191 178 4e-40
>seq89584
Length=148959
Score = 509 bits (564), Expect = 5e-140
Identities = 708/987 (72%), Gaps = 6/987 (1%)
Strand=Plus/Plus
Query 21462 TCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAG 21521
|| || || || || || || |||||||||||||| || || |||||||| || || |
Sbjct 146 TCTACAGAAGCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATA 205
Query 21522 CCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCT 21581
||||| || ||||| || | || |||||||| ||||| || || | || | | |
Sbjct 206 CCAAGATTAGCACGATTTATGATATCAGCCCAAGTGTTAATAACACGACCTTGGCTATCA 265
Query 21582 AGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGC 21641
| | ||||||||||| || ||||| ||||||||||| ||||| ||| | || |
Sbjct 266 ACTACGGATTGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAA 325
Query 21642 GCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAA 21701
|||| ||||| ||||| || |||||||| ||||| | |||||||| | |||||||
Sbjct 326 GCAGTGAACCAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAA 385
Query 21702 TTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATA 21761
|| || || ||||||||||||||||| | || |||||||| || ||||| || ||||||
Sbjct 386 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATA 445
Query 21762 TTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTC 21821
|| || || ||||||||||||||||| ||||||| | || || | | ||||||
Sbjct 446 TTATAGGTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGACTCATTTTCAGTG 505
Query 21822 GTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCA 21881
|| || | || | || || |||| ||| ||||||||| ||| | ||
Sbjct 506 GTTTCCCTGATTAAACTAGAAGTTACCAAAGAACCATGCATAGCACTGAATAGGGAACCG 565
Query 21882 CCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCC 21941
|| ||||| || || || || | ||||||||| |||||||||||||| |||||||| |||
Sbjct 566 CCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATGTTGTGCTCTGCC 625
Query 21942 TGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAA 22001
||||| || | |||| ||||||| || || ||||| || || |||||| ||||||| |||
Sbjct 626 TGGAATACAATCATGAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAA 685
Query 22002 GAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAG 22061
|| || |||| || || | | ||| ||||| || ||||| || |||||||| ||
Sbjct 686 CTTCCTTGACCAATAGGGTAGATCAAGAAAACAGCTGTAGCAGCCGCAACAGGAGCTGAA 745
Query 22062 TACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCC 22121
|| |||||| ||||| || | ||| || || || | |||||||||||||| || |||
Sbjct 746 TATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 805
Query 22122 ATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTG 22181
|||||| | || |||| | ||||| | || | |||| | |||||||| |||
Sbjct 806 ATGTAACAAGCTACACCAAGTAAAAAGTGTAGAACAATAAGTTCATAAGGACCGCCATTG 865
Query 22182 TACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCA 22241
|| | ||| ||||||| | || |||||||| |||||||| || || | || || ||
Sbjct 866 TATAACCACTCATCAACAGATGCTGCTTCCCATATTGGGTAAAAATGCAAACCTATAGC- 924
Query 22242 TTACTG--CTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAG 22299
| | | | |||| | ||| ||||| || || ||||| ||||| | || || ||||
Sbjct 925 -TGCGGAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCCATAAAGTAGAGACCCAG 983
Query 22300 CGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAA 22359
|| ||||| || || ||||| || || || || || || ||| ||||| || ||||
Sbjct 984 AAACAGGTTCACGAATACCATCAATATCGACTGGAGGGGCAGCAATGAAGGCAATGATAA 1043
Query 22360 AACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAA 22418
| || || |||| ||| | | | || ||||| | || || |||||||| | |||
Sbjct 1044 ATACAGAAGTTGCGGTCAATAAAGTA-GGGATCATCAAAACACCAAACCATCCGATGTAA 1102
Query 22419 AGACGGTTATTAGTAGAGGTGACCCAG 22445
|||||||| | |||| ||| | ||||
Sbjct 1103 AGACGGTTTTCAGTACTGGTAATCCAG 1129
>seq374
Length=1248919
Score = 235 bits (260), Expect = 2e-57
Identities = 253/335 (76%), Gaps = 0/335 (0%)
Strand=Plus/Minus
Query 21462 TCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAG 21521
|| || || || || || || |||||||||||||| || || |||||||| || || |
Sbjct 601195 TCTACAGAAGCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATA 601136
Query 21522 CCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCT 21581
||||| || ||||| || | || |||||||| ||||| || || | || | | |
Sbjct 601135 CCAAGATTAGCACGATTTATGATATCAGCCCAAGTGTTAATAACACGACCTTGGCTATCA 601076
Query 21582 AGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGC 21641
| | ||||||||||| || ||||| ||||||||||| ||||| ||| | || |
Sbjct 601075 ACTACGGATTGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAA 601016
Query 21642 GCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAA 21701
|||| ||||| ||||| || |||||||| ||||| | |||||||| | |||||||
Sbjct 601015 GCAGTGAACCAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAA 600956
Query 21702 TTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATA 21761
|| || || ||||||||||||||||| | || |||||||| || ||||| || ||||||
Sbjct 600955 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATA 600896
Query 21762 TTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACC 21796
|| || || ||||||||||||||||| |||||||
Sbjct 600895 TTATAGGTTTCTTCCTCTTGACCAAATCTGTAACC 600861
>seq2
Length=81761211
Score = 235 bits (260), Expect = 2e-57
Identities = 253/335 (76%), Gaps = 0/335 (0%)
Strand=Plus/Minus
Query 21462 TCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAG 21521
|| || || || || || || |||||||||||||| || || |||||||| || || |
Sbjct 48006189 TCTACAGAAGCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATA 48006130
Query 21522 CCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCT 21581
||||| || ||||| || | || |||||||| ||||| || || | || | | |
Sbjct 48006129 CCAAGATTAGCACGATTTATGATATCAGCCCAAGTGTTAATAACACGACCTTGGCTATCA 48006070
Query 21582 AGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGC 21641
| | ||||||||||| || ||||| ||||||||||| ||||| ||| | || |
Sbjct 48006069 ACTACGGATTGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAA 48006010
Query 21642 GCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAA 21701
|||| ||||| ||||| || |||||||| ||||| | |||||||| | |||||||
Sbjct 48006009 GCAGTGAACCAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAA 48005950
Query 21702 TTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATA 21761
|| || || ||||||||||||||||| | || |||||||| || ||||| || ||||||
Sbjct 48005949 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATA 48005890
Query 21762 TTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACC 21796
|| || || ||||||||||||||||| |||||||
Sbjct 48005889 TTATAGGTTTCTTCCTCTTGACCAAATCTGTAACC 48005855
Score = 95.1 bits (104), Expect = 4e-15
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 22038 GTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAGATCCAGGGCCTCAT-CCCTAGTCG 22096
|| ||||| || |||||||| || || ||||||| ||||| || ||| |||| | |
Sbjct 22128667 GTAGCAGCCGCAACAGGAGCTGAATATGCAACAACAATCCAAGGGTGCATACCCTGATGG 22128608
Query 22097 ATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATAC 22156
| | |||||||||||||| || ||||||||| | || ||||| | ||||| | ||
Sbjct 22128607 AAA-CTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAATTAAAAAGTGTAGAAC 22128549
Query 22157 GGTGAGTTGGAATGGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAAT 22216
| | || | |||||||| ||||| | ||| ||||||| | | |||||||| ||
Sbjct 22128548 AATAATTTCATAAGGACCGCCATTGTATAACCACTCATCAATAGATGTTGCTTCCCATAT 22128489
Query 22217 TGGGTA 22222
|| |||
Sbjct 22128488 TGAGTA 22128483
>seq64191
Length=168564
Score = 178 bits (196), Expect = 4e-40
Identities = 353/514 (69%), Gaps = 14/514 (3%)
Strand=Plus/Minus
Query 21927 ATATTGTGCTCAGCCTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGC 21986
|| |||||||| | |||| | || | |||| ||||||| | || ||||| || || |||
Sbjct 59082 ATGTTGTGCTCTGACTGGCATACAATCATGAAGTTGAAATTACCAGATATTCCTAAAGGC 59023
Query 21987 ATAGCATCAGAAAAAGAGCCCTGTCCAAACGGATAAA-CAAGGAACACAGCAGTCGCAGC 22045
||| ||||||| ||| || || |||| || || | |||| || |||| || |||||
Sbjct 59022 ATACCATCAGAGAAACTTCCTTGGCCAATAGGGTAGATCAAGTAA-ACAGTTGTAGCAGC 58964
Query 22046 GGCGACAGGAGCAGAGTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAG 22105
|| |||||||| || || |||||| ||||| || | ||| || || || | |||||
Sbjct 58963 CGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCACATACCCAGACGGAAACTAAG 58904
Query 22106 TTCCCACTCTCGTCCCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTG 22165
||||||||| || ||||||||| | || |||| | |||| | || | ||||
Sbjct 58903 TTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAAAAGTATAGAACAATAAGTTC 58844
Query 22166 GAATGGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAA 22225
| |||||| |||||| | ||| ||||||| | | ||||||| |||||||| ||
Sbjct 58843 ATAAGGACCGTTGTTGTATAACCACTCATCAACAGATTCTACTTCCCATATTGGGTAAAA 58784
Query 22226 GTGTAGTCCGATGGCATTACTG--CTCGGAACGACGGCTCCTGATATGATGTTGTTACCA 22283
|| | || || || | | | | |||| | | | | ||| || || ||||| |||
Sbjct 58783 ATGCAAACCTATAGC--TGCGGAAGTAGGAATAATGACACTTGAGATAATATTGTTTCCA 58726
Query 22284 TACAACAGGGAGCCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCA 22343
|| | || || |||| || ||||| || || ||||| || || | || | || ||
Sbjct 58725 TAAAGTAGAGACCCAGAAACAGGTTCACGAATACCATCAATATCGGCTGGAGAGGCAGCA 58666
Query 22344 ACAAAGGCGATAATAAA---ACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGAC 22399
| ||||| || ||||| | ||||| |||| ||| | | | || ||||| | |
Sbjct 58665 ATGAAGGCAATGATAAATGCATAAGTT---GCGGTCAATAAAGTA-GGGATCATCAAAAT 58610
Query 22400 TCCGAACCATCCTACATAAAGACGGTTATTAGTA 22433
|| || ||||| | ||||||||||| || |||
Sbjct 58609 ACCAAATCATCCGATGTAAAGACGGTTTTTGGTA 58576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146052462467520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |