Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq2 134 2e-26
seq91 107 2e-18
seq293 98.7 1e-15
seq36 96.9 4e-15
>seq2
Length=81761211
Score = 134 bits (148), Expect = 2e-26
Identities = 337/508 (66%), Gaps = 8/508 (2%)
Strand=Plus/Minus
Query 175191 TGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATT-GTGGATTTTCTCA 175249
|||||||| ||| |||| | || |||| | | || | | | | ||||| ||||| |
Sbjct 31019193 TGATGTTGCTGGGGTTGATGAAGC-AAAGCAGGATTTCATGGAAGTAGTGGAGTTTCTTA 31019135
Query 175250 AGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGG 175309
|| |||| || || | | || ||||| || || ||| | |||||| |
Sbjct 31019134 AGAAACCAGAAAGGTTTACTGCTGTCGGTGCTCGTATACCTAAAGGTGTTCTTCTCATTG 31019075
Query 175310 GTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCC 175369
|| || ||||| |||||||| || || ||| ||||| || |||||| | ||| |
Sbjct 31019074 GTCCTCCTGGTACTGGAAAGACTCTACTTGCCAAGGCCATTGCTGGTGAAGCTGGTGTTC 31019015
Query 175370 CATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAA 175429
| || || ||| | | | ||||||||||||||||||||||| || ||| |
Sbjct 31019014 CCTTTTTCTCTATCTCAGGATCTGAGTTTGTGGAGATGTTTGTTGGTGTTGGCGCCTCAC 31018955
Query 175430 GGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATG 175489
||||||| ||||| || | | || || ||| ||| |||||||| ||| ||||||
Sbjct 31018954 GGGTTCGTGATCTTTTCAAGAAGGCTAAAGAGAATGCACCTTGTATTGTATTCGTTGATG 31018895
Query 175490 AGATTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAG 175549
| |||||||| || || | |||||| | | ||| | | ||||| || ||||
Sbjct 31018894 AAATTGATGCTGTTGGAAGGCAACGAGGAACGGGTATTGGAGGGGGGAATGATGAAAGAG 31018835
Query 175550 AACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTG 175609
||||||| | || || || | || || |||||||| ||||| | || || ||
Sbjct 31018834 AACAAACTCTGAACCAGCTTTTGACTGAAATGGATGGTTTTGAAGGAAATACAGGTATCA 31018775
Query 175610 TGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTC 175669
| ||| |||| || ||||| |||| || ||||| ||| ||| | || | || ||
Sbjct 31018774 TAGTTCTTGCAGCTACTAACCGCGCAGACATCCTGGATTCCGCTTTGCTAAGGCCTGGAA 31018715
Query 175670 GTTTTGATCGCAAGATCCAAGTGGGTCT 175697
| |||||| ||| || ||||||||
Sbjct 31018714 GGTTTGAT----AGA--CAGGTGGGTCT 31018693
>seq91
Length=344896
Score = 107 bits (118), Expect = 2e-18
Identities = 250/374 (67%), Gaps = 10/374 (3%)
Strand=Plus/Plus
Query 175222 GAACTTGAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCC 175281
|| ||| |||| | || |||||| | ||| | || || | ||| | ||||||
Sbjct 231539 GAGCTTCAAGAAGTCGTCGATTTTTTGAAGAATCCTGATAAATACACGGCTCTTGGTGCT 231598
Query 175282 AAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCC 175341
||||| ||| ||| |||| | | || ||| || || || ||||| || || ||
Sbjct 231599 AAGATTCCCAAAGGTTGCCTTTTGGTTGGGCCGCCGGGAACTGGGAAGACGCTGCTAGCT 231658
Query 175342 CGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAACTTTGTG 175401
|| || |||| || || | ||| || ||| | ||| |||| || | |||||
Sbjct 231659 CGGGCGGTCGCCGGCGAGGCTGGTGTGCCCTTCTTTTCGTGTGCTGCTTCAGAGTTTGTT 231718
Query 175402 GAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCC--GCG 175459
|| | |||||||| || || || |||||| | ||| | ||||| | || |||
Sbjct 231719 GAACTTTTTGTTGGAGTTGGAGCTTCAAGGGTGAGGGATTTGTTTGAGAAGGCAAAGGCG 231778
Query 175460 AAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCG 175519
||| || |||||||| || ||||| |||||||||||||| || | ||| | | |
Sbjct 231779 AAAGCT--CCCTGTATTGTTTTTATTGACGAGATTGATGCGGTTGGAAGGCAGAGAGGGG 231836
Query 175520 CTGG---TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCG 175576
|||| |||| | ||||| ||||||||||| || |||||||| || | || |
Sbjct 231837 CTGGGCTTGGTGGT---GGTAATGATGAGAGAGAACAGACCATTAATCAGCTCTTGACTG 231893
Query 175577 AGATGGATGGCTTT 175590
|||||||||| |||
Sbjct 231894 AGATGGATGGATTT 231907
>seq293
Length=413263
Score = 98.7 bits (108), Expect = 1e-15
Identities = 162/233 (70%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055
|||||| |||| ||||| || | | ||||| | |||||| || ||| |||||
Sbjct 226865 GCCATCGAAACCGTACCCTGCGTCGCCCGTAAGGCTCAGTGGGCACTGCGCTGGATTGAC 226924
Query 65056 ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTC 65115
| ||| || || || ||||| || | || |||||||| || || ||||| |||
Sbjct 226925 GCC---TCTGAATCATTTGCTGAGCGGATTCTCGCTTTTGCGTGCGTCGAAGGTATTTTC 226981
Query 65116 TTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTA 65175
|||||||| |||||||| || | ||| | |||||||| ||| | |||||||| ||
Sbjct 226982 TTCTCCGGCAGCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCTC 227041
Query 65176 TGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
|| || || || || || || || || ||||| |||||| || |||||
Sbjct 227042 ACTTTTTCTAACGAGCTCATCTCTCGTGACGAGGGACTCCACTGCGACTTTGC 227094
>seq36
Length=6822877
Score = 96.9 bits (106), Expect = 4e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127
|| || || ||||| || |||| ||||| || || ||||| ||||||||||| ||
Sbjct 1783766 TCTTTTGCAGAGCGAATTCTTGCATTTGCTTGCGTTGAGGGCATCTTCTTCTCTGGTAGT 1783707
Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187
|||||||| || | ||| |||||||| | || || ||||| || || || || ||
Sbjct 1783706 TTCTGCGCCATCTTCTGGCTGAAGAAGAGAGGGCTAATGCCTGGTCTCACTTTTTCCAAC 1783647
Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
|| |||||||| || |||||||| || ||| || |||||
Sbjct 1783646 GAGCTTATTTCTCGTGATGAGGGCCTGCACTGTGACTTTGC 1783606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595901561361920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |