Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq89584 509 5e-140 seq374 235 2e-57 seq2 235 2e-57 seq64191 178 4e-40 >seq89584 Length=148959 Score = 509 bits (564), Expect = 5e-140 Identities = 708/987 (72%), Gaps = 6/987 (1%) Strand=Plus/Minus Query 41242 CTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCC 41301 |||| | ||| |||| | ||||||||||| | |||||||| || || | ||||| || Sbjct 1129 CTGGATTACCAGTACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCC 1070 Query 41302 GTGCCTCCTTG-CCGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACCACCTGTTG 41360 | | | ||| |||| || || ||||| || ||||| ||| || || || || | Sbjct 1069 -TACTTTATTGACCGCAACTTCTGTATTTATCATTGCCTTCATTGCTGCCCCTCCAGTCG 1011 Query 41361 ACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATAT 41420 | || ||||| || || ||||| || |||| || || | ||||| ||||| || || | Sbjct 1010 ATATTGATGGTATTCGTGAACCTGTTTCTGGGTCTCTACTTTATGGAAACAATATTATCT 951 Query 41421 CAGGAGCCGTCGTTCCGAG--CAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGA 41478 |||| ||| | |||| | | | | || || || | || || |||||||| ||||| Sbjct 950 CAGGTGCCATTATTCCTACTTCCGCA--GCTATAGGTTTGCATTTTTACCCAATATGGGA 893 Query 41479 AGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCA 41538 ||| || | ||||||| ||| | ||||| |||||||| | |||| | || | || Sbjct 892 AGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTTATTGTTCTACA 833 Query 41539 CTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGG 41598 ||| | |||| || | ||||||||| || |||||||||||||| | || || || Sbjct 832 CTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGG 773 Query 41599 GATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTT 41658 ||| | || ||||| |||||| || || |||||||| || ||||| || ||||| || Sbjct 772 TATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACAGCTGTTTT 713 Query 41659 CCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGG 41718 | | | || || |||| || || ||| ||||||| |||||| || || ||||| || Sbjct 712 CTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGG 653 Query 41719 CACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCA 41778 || ||||||| |||| | || |||||||| |||||||| |||||||||||||| ||||| Sbjct 652 TACTTTCAACTTCATGATTGTATTCCAGGCAGAGCACAACATTCTTATGCATCCATTTCA 593 Query 41779 CATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCT 41838 |||| | || || || || ||||| || || | ||| ||||||||| ||| | Sbjct 592 CATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTT 533 Query 41839 GGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAA 41898 ||| || || | || | || || |||||| | | || || | ||||||| Sbjct 532 GGTAACTTCTAGTTTAATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAG 473 Query 41899 GTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCT 41958 ||||||||||||||||| || || |||||||| || ||||| || |||||||| || | Sbjct 472 ATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATT 413 Query 41959 TATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTG 42018 ||||||||||||||||| || || ||||||||| | |||||||| | ||||| || Sbjct 412 GATCTTCCAATATGCTAGTTTCAACAATTCCCGTTCCTTGCATTTCTTCTTGGCTGCTTG 353 Query 42019 GCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAA 42078 |||||| || ||||| ||||| |||| | || | ||| ||||| ||||||||||| Sbjct 352 GCCTGTAGTGGGTATCTGGTTCACTGCTTTGGGTATTAGTACTATGGCGTTCAACTTGAA 293 Query 42079 TGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGC 42138 ||||| || ||||||||||| | | | | | || | || || ||||| ||||| Sbjct 292 CGGTTTTAATTTTAACCAATCCGTAGTTGATAGCCAAGGTCGTGTTATTAACACTTGGGC 233 Query 42139 TGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAA 42198 ||| || | || ||||| || ||||| | || || |||||||| || || |||||||| Sbjct 232 TGATATCATAAATCGTGCTAATCTTGGTATGGAAGTAATGCATGAACGTAATGCACACAA 173 Query 42199 CTTCCCGCTTGACCTTGCATCCGTGGA 42225 |||||| || || || || || || || Sbjct 172 CTTCCCTCTAGATCTAGCTTCTGTAGA 146 >seq374 Length=1248919 Score = 235 bits (260), Expect = 2e-57 Identities = 253/335 (76%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 ||||||| ||||||||||||||||| || || |||||||| || ||||| || |||||| Sbjct 600861 GGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 600920 Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010 || || | ||||||||||||||||| || || ||||||||| | |||||||| | Sbjct 600921 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCCCGTTCCTTGCATTTCTTCTTG 600980 Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTC 42070 ||||| |||||||| || ||||| ||||| |||| | || | ||| ||||| ||| Sbjct 600981 GCTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTGGGTATTAGTACTATGGCGTTC 601040 Query 42071 AACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAAC 42130 |||||||| ||||| || ||||||||||| | | | | | || | || || ||| Sbjct 601041 AACTTGAACGGTTTTAATTTTAACCAATCCGTAGTTGATAGCCAAGGTCGTGTTATTAAC 601100 Query 42131 ACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAAC 42190 || |||||||| || | || ||||| || ||||| | || || |||||||| || || Sbjct 601101 ACTTGGGCTGATATCATAAATCGTGCTAATCTTGGTATGGAAGTAATGCATGAACGTAAT 601160 Query 42191 GCACACAACTTCCCGCTTGACCTTGCATCCGTGGA 42225 |||||||||||||| || || || || || || || Sbjct 601161 GCACACAACTTCCCTCTAGATCTAGCTTCTGTAGA 601195 >seq2 Length=81761211 Score = 235 bits (260), Expect = 2e-57 Identities = 253/335 (76%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 ||||||| ||||||||||||||||| || || |||||||| || ||||| || |||||| Sbjct 48005855 GGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 48005914 Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010 || || | ||||||||||||||||| || || ||||||||| | |||||||| | Sbjct 48005915 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCCCGTTCCTTGCATTTCTTCTTG 48005974 Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTC 42070 ||||| |||||||| || ||||| ||||| |||| | || | ||| ||||| ||| Sbjct 48005975 GCTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTGGGTATTAGTACTATGGCGTTC 48006034 Query 42071 AACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAAC 42130 |||||||| ||||| || ||||||||||| | | | | | || | || || ||| Sbjct 48006035 AACTTGAACGGTTTTAATTTTAACCAATCCGTAGTTGATAGCCAAGGTCGTGTTATTAAC 48006094 Query 42131 ACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAAC 42190 || |||||||| || | || ||||| || ||||| | || || |||||||| || || Sbjct 48006095 ACTTGGGCTGATATCATAAATCGTGCTAATCTTGGTATGGAAGTAATGCATGAACGTAAT 48006154 Query 42191 GCACACAACTTCCCGCTTGACCTTGCATCCGTGGA 42225 |||||||||||||| || || || || || || || Sbjct 48006155 GCACACAACTTCCCTCTAGATCTAGCTTCTGTAGA 48006189 Score = 95.1 bits (104), Expect = 4e-15 Identities = 134/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 41465 TACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAA 41524 ||| |||| |||||||| | | ||||||| ||| | ||||| |||||||| | || Sbjct 22128483 TACTCAATATGGGAAGCAACATCTATTGATGAGTGGTTATACAATGGCGGTCCTTATGAA 22128542 Query 41525 CTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTT 41584 | | || | ||||| | ||||| || | ||||||||| || |||||||||||| Sbjct 22128543 ATTATTGTTCTACACTTTTTAATTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTT 22128602 Query 41585 AGCTATCGACTAGGG-ATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGC 41643 || | || | |||| ||| || ||||| ||||||| || || |||||||| || || Sbjct 22128603 AG-TTTCCATCAGGGTATGCACCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCGGC 22128661 Query 41644 TGCGAC 41649 ||| || Sbjct 22128662 TGCTAC 22128667 >seq64191 Length=168564 Score = 178 bits (196), Expect = 4e-40 Identities = 353/514 (69%), Gaps = 14/514 (3%) Strand=Plus/Plus Query 41254 TACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG- 41312 ||| || ||||||||||| | ||||| || || | | ||||| || | | | ||| Sbjct 58576 TACCAAAAACCGTCTTTACATCGGATGATTTGGTATTTTGATGATCCC-TACTTTATTGA 58634 Query 41313 CCGCTACAACTTGT---TTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATG 41369 |||| ||||| | ||||| || ||||| ||| || | || | || || |||| Sbjct 58635 CCGC---AACTTATGCATTTATCATTGCCTTCATTGCTGCCTCTCCAGCCGATATTGATG 58691 Query 41370 GAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCG 41429 | || || ||||| || |||| || || | ||||| ||||| || || ||| | | | Sbjct 58692 GTATTCGTGAACCTGTTTCTGGGTCTCTACTTTATGGAAACAATATTATCTCAAGTGTCA 58751 Query 41430 TCGTTCCGAG--CAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTAC 41487 | |||| | | | | || || || | || || |||||||| ||||||| | | Sbjct 58752 TTATTCCTACTTCCGCA--GCTATAGGTTTGCATTTTTACCCAATATGGGAAGTAGAATC 58809 Query 41488 ACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCAT 41547 ||||||| ||| | |||||| |||||| | |||| | || | |||| | | Sbjct 58810 TGTTGATGAGTGGTTATACAACAACGGTCCTTATGAACTTATTGTTCTATACTTTTTACT 58869 Query 41548 TGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCC 41607 ||| || | ||||||||| || |||||||||||||| | || || || ||| | || Sbjct 58870 TGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGTGCCC 58929 Query 41608 CTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTG-TTT 41666 ||||| |||||| || || |||||||| || ||||| || |||| || |||| | | Sbjct 58930 TTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACAACTGT-TTACTTGATCT 58988 Query 41667 ATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCA 41726 | || |||| || || ||| ||||||| |||||| || || ||||| || | |||| Sbjct 58989 ACCCTATTGGCCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAATTTCA 59048 Query 41727 ACTACATGCTGGTGTTCCAGGCTGAGCACAATAT 41760 ||| |||| | || | |||| | |||||||| || Sbjct 59049 ACTTCATGATTGTATGCCAGTCAGAGCACAACAT 59082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146058855659136