Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_020874.1
Length=46198
Score E
Sequences producing significant alignments: (Bits) Value
seq89584 459 8e-125
seq2 188 2e-43
seq374 187 7e-43
seq64191 159 1e-34
>seq89584
Length=148959
Score = 459 bits (508), Expect = 8e-125
Identities = 698/982 (71%), Gaps = 10/982 (1%)
Strand=Plus/Plus
Query 25874 GATGCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGG 25933
|| |||| || || || ||||| || |||||||| || ||||| ||||| | || ||
Sbjct 152 GAAGCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATACCAAGA 211
Query 25934 TTAGCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAAC-ATCTACTAC 25992
||||| || |||| | ||||||||| || | || || | | || | ||| |||||
Sbjct 212 TTAGCACGATTTATGATATCAGCCCAAGT-GTTAATAACACGACCTTGGCTATCAACTAC 270
Query 25993 TGACTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGT 26052
|| |||||||| |||||||| || | ||| || ||||| || | ||||||| || ||
Sbjct 271 GGATTGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAAGCAGT 330
Query 26053 CAGCCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATT 26112
| ||| || || || || ||||||| ||| | |||||||| | |||||| || ||
Sbjct 331 GAACCAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAATTGTT 390
Query 26113 AAAACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATA 26172
||||| ||||| || || || |||| ||||| || || || || || |||||||||||
Sbjct 391 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATA 450
Query 26173 TGTCTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTC 26232
|| ||||| ||||| ||||| | || || | ||| || | | || || |||||
Sbjct 451 GGTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTC 510
Query 26233 --TGCAATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCG 26290
|| | ||| || |||| |||||| || ||||||||| ||| || | || |||
Sbjct 511 CCTG-ATTAAACTAG-AAGTTACCAAAGAACCATGCATAGCACTGAATAGGGAACCGCCG 568
Query 26291 AAAACCCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGG 26350
|| || ||||| || || ||| || ||||| ||||| || || || || ||||| |||
Sbjct 569 AATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATGTTGTGCTCTGCCTGG 628
Query 26351 AATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTC 26410
||||| | ||| ||||| ||||||||||| || || | |||||| |||||| |||||
Sbjct 629 AATACAATCATGAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTT 688
Query 26411 CCTTGTCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATAT 26470
||||| || | ||| || | ||||| || || ||| || | | || |||| ||||
Sbjct 689 CCTTGACCAATAGGGTAGATCAAGAAAACAGCTGTAGCAGCCGCAACAGGAGCTGAATAT 748
Query 26471 GCAACAAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCA 26530
|||||| ||||| || | ||| || || | | || |||||||||| | ||
Sbjct 749 GCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATG 808
Query 26531 TATGCTGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTAT 26590
|| ||||| || | ||| ||||| | | ||| |||| ||| || ||||||||||||
Sbjct 809 TAACAAGCTACACCAAGTAAAAAGTGTAGAACAATAAGTTCATAAGGACCGCCATTGTAT 868
Query 26591 AGCCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTA 26650
| |||||| || | | | |||||||| || ||||||||||| | || || ||
Sbjct 869 AACCACTCATCAACAGATGCTGCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTGCG 928
Query 26651 GAGGAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACT 26710
|| | || | | || ||||| || ||||||||||| || | || || || |||||
Sbjct 929 GAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCCATAAAGTAGAGACCCAGAAACA 988
Query 26711 GGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACA 26769
|| ||||| || ||||| ||||| || || || || || |||||||||| ||||| |||
Sbjct 989 GGTTCACGAATACCATCAATATCGACTGGAGGGGCAGCAATGAAGGCAATGATAAATACA 1048
Query 26770 TGTAGTGGCTG-CGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGAC 26828
| ||| || | | | ||| |||| ||||| | || || |||||||| | || ||||
Sbjct 1049 -GAAGTTGCGGTCAATAAAGTAGGG-ATCATCAAAACACCAAACCATCCGATGTAAAGAC 1106
Query 26829 GGTTCTCAGTACTTGTAACCCA 26850
|||| |||||||| |||| |||
Sbjct 1107 GGTTTTCAGTACTGGTAATCCA 1128
>seq2
Length=81761211
Score = 188 bits (208), Expect = 2e-43
Identities = 298/421 (71%), Gaps = 6/421 (1%)
Strand=Plus/Minus
Query 25874 GATGCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGG 25933
|| |||| || || || ||||| || |||||||| || ||||| ||||| | || ||
Sbjct 48006183 GAAGCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATACCAAGA 48006124
Query 25934 TTAGCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAAC-ATCTACTAC 25992
||||| || |||| | ||||||||| || | || || | | || | ||| |||||
Sbjct 48006123 TTAGCACGATTTATGATATCAGCCCAAGT-GTTAATAACACGACCTTGGCTATCAACTAC 48006065
Query 25993 TGACTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGT 26052
|| |||||||| |||||||| || | ||| || ||||| || | ||||||| || ||
Sbjct 48006064 GGATTGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAAGCAGT 48006005
Query 26053 CAGCCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATT 26112
| ||| || || || || ||||||| ||| | |||||||| | |||||| || ||
Sbjct 48006004 GAACCAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAATTGTT 48005945
Query 26113 AAAACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATA 26172
||||| ||||| || || || |||| ||||| || || || || || |||||||||||
Sbjct 48005944 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATA 48005885
Query 26173 TGTCTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTT- 26231
|| ||||| ||||| ||||| | || || | ||| || | | || || ||||
Sbjct 48005884 GGTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTC 48005825
Query 26232 -CTGCAATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCG 26290
||| | ||| | ||||| |||||| || ||||||||| ||| || | || |||
Sbjct 48005824 CCTG-ATTAAACTA-GAAGTTACCAAAGAACCATGCATAGCACTGAATAGGGAACCGCCG 48005767
Query 26291 A 26291
|
Sbjct 48005766 A 48005766
>seq374
Length=1248919
Score = 187 bits (206), Expect = 7e-43
Identities = 291/410 (71%), Gaps = 6/410 (1%)
Strand=Plus/Minus
Query 25874 GATGCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGG 25933
|| |||| || || || ||||| || |||||||| || ||||| ||||| | || ||
Sbjct 601189 GAAGCTAGATCTAGAGGGAAGTTGTGTGCATTACGTTCATGCATTACTTCCATACCAAGA 601130
Query 25934 TTAGCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAAC-ATCTACTAC 25992
||||| || |||| | ||||||||| || | || || | | || | ||| |||||
Sbjct 601129 TTAGCACGATTTATGATATCAGCCCAAGT-GTTAATAACACGACCTTGGCTATCAACTAC 601071
Query 25993 TGACTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGT 26052
|| |||||||| |||||||| || | ||| || ||||| || | ||||||| || ||
Sbjct 601070 GGATTGGTTAAAATTAAAACCGTTCAAGTTGAACGCCATAGTACTAATACCCAAAGCAGT 601011
Query 26053 CAGCCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATT 26112
| ||| || || || || ||||||| ||| | |||||||| | |||||| || ||
Sbjct 601010 GAACCAGATACCCACTACAGGCCAAGCAGCCAAGAAGAAATGCAAGGAACGGGAATTGTT 600951
Query 26113 AAAACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATA 26172
||||| ||||| || || || |||| ||||| || || || || || |||||||||||
Sbjct 600950 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATA 600891
Query 26173 TGTCTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTT- 26231
|| ||||| ||||| ||||| | || || | ||| || | | || || ||||
Sbjct 600890 GGTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTC 600831
Query 26232 -CTGCAATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAG 26280
||| | ||| | ||||| |||||| || ||||||||| ||| ||
Sbjct 600830 CCTG-ATTAAACTA-GAAGTTACCAAAGAACCATGCATAGCACTGAATAG 600783
>seq64191
Length=168564
Score = 159 bits (176), Expect = 1e-34
Identities = 344/506 (68%), Gaps = 10/506 (2%)
Strand=Plus/Minus
Query 26332 TATATTATGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGG 26391
||| || || |||| ||| |||| | ||| ||||| ||| ||||||| || || | |||
Sbjct 59083 TATGTTGTGCTCTGACTGGCATACAATCATGAAGTTGAAATTACCAGATATTCCTAAAGG 59024
Query 26392 CATTCCATCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGC 26451
||| |||||| ||||| ||||| || | ||| || | ||| | || | ||| ||
Sbjct 59023 CATACCATCAGAGAAACTTCCTTGGCCAATAGGGTAGATCAAGTAAACAGTTGTAGCAGC 58964
Query 26452 GGATAGTGGTGCTGTATATGCAACAAATATCCATGGTCTCATTCCTAGTCTGTAAGATAG 26511
| | || |||| |||||||||| ||||| || | ||| || || | | || ||
Sbjct 58963 CGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCACATACCCAGACGGAAACTAAG 58904
Query 26512 TTCCCACTGTCTCCCTGCATATGCTGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTG 26571
|||||||| | || || ||||| || | ||| |||| | | ||| ||||
Sbjct 58903 TTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAAAAGTATAGAACAATAAGTTC 58844
Query 26572 ATATGGTCCGCCATTGTATAGCCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAA 26631
||| || ||| ||||||| |||||| || | | | ||||||| || ||||||||
Sbjct 58843 ATAAGGACCGTTGTTGTATAACCACTCATCAACAGATTCTACTTCCCATATTGGGTAAAA 58784
Query 26632 ATGTAGTCCGATTGCGTTAGAGGAGG--GGACGACTG-CTCCTGATATTATATTGTTTCC 26688
||| | || || || | ||| | ||| | || | | ||| || |||||||||||
Sbjct 58783 ATGCAAACCTATAGCT---GCGGAAGTAGGAATAATGACACTTGAGATAATATTGTTTCC 58727
Query 26689 GTACATTAACGAGCCGGAAACTGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGC 26748
|| | || || || ||||| || ||||| || ||||| ||||| | || | || ||
Sbjct 58726 ATAAAGTAGAGACCCAGAAACAGGTTCACGAATACCATCAATATCGGCTGGAGAGGCAGC 58667
Query 26749 GATGAAGGCAAGTATAAA-ACATGTAGTGGCTG-CGAGTAAGCAGGGTATCATAAGCACC 26806
|||||||||| ||||| ||| ||| || | | | ||| |||| ||||| | |
Sbjct 58666 AATGAAGGCAATGATAAATGCAT-AAGTTGCGGTCAATAAAGTAGGG-ATCATCAAAATA 58609
Query 26807 CCGAACCATCCCACATAGAGACGGTT 26832
|| || ||||| | || ||||||||
Sbjct 58608 CCAAATCATCCGATGTAAAGACGGTT 58583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147554862497280
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