Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq89584 563 1e-155 seq2 239 5e-58 seq374 235 6e-57 seq64191 206 3e-48 seq767 98.7 1e-15 >seq89584 Length=148959 Score = 563 bits (624), Expect = 1e-155 Identities = 722/991 (73%), Gaps = 8/991 (1%) Strand=Plus/Minus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 ||||| | ||| | || | |||| ||||| | || |||| ||||| |||||| | | Sbjct 1136 TCTGCAACTGGATTACCAGTACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGA 1077 Query 155030 TGATCCCTTGCCTCCT---CGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCAC 155086 |||||||| | | ||| || || || |||||| ||||||||||||| | Sbjct 1076 TGATCCCTACTTTATTGACCGCAACTTCTGTATTTATCATTG---CCTTCATTGCTGCCC 1020 Query 155087 CTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACA 155146 |||| || || |||||||||||||||||||| || |||| ||| || | ||||| |||| Sbjct 1019 CTCCAGTCGATATTGATGGTATTCGTGAACCTGTTTCTGGGTCTCTACTTTATGGAAACA 960 Query 155147 ACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTA 155206 | || ||||| ||||| || | |||| ||| || || ||| | || || || || | Sbjct 959 ATATTATCTCAGGTGCCATTATTCCTACTTCCGCAGCTATAGGTTTGCATTTTTACCCAA 900 Query 155207 TTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAG 155266 | |||||||||||| || ||||||||||||| |||||||| ||||||| ||||| | | Sbjct 899 TATGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTTATTG 840 Query 155267 TCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACC 155326 | | ||||| | | || | | ||| |||||| ||||||||||| || || Sbjct 839 TTCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCC 780 Query 155327 GTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCG 155386 |||| || ||||| |||||||| ||||||||| || || || || | ||||| | Sbjct 779 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACAG 720 Query 155387 CTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTA 155446 |||| ||| | | || ||| | |||||||| ||||||||||| |||||| | || | Sbjct 719 CTGTTTTCTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 660 Query 155447 TCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACC 155506 | ||||||||||| |||| ||| | || ||||| ||||| ||||| || |||||||| | Sbjct 659 TATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCAGAGCACAACATTCTTATGCATC 600 Query 155507 CCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACG 155566 | || |||||| | || ||||| ||||| ||||| || || || ||| ||||||||| | Sbjct 599 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 540 Query 155567 GTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATG 155626 |||| ||||| || ||| ||||| | ||||| ||||| | |||||| || | | Sbjct 539 GTTCTTTGGTAACTTCTAGTTTAATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAG 480 Query 155627 GTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCG 155686 |||||| || || ||||| |||||||| ||||| ||||| || |||||||| || || | Sbjct 479 GTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTTG 420 Query 155687 GTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTG 155746 | || | |||||||| ||||| |||||||| || | | || |||||| | | Sbjct 419 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCCCGTTCCTTGCATTTCTTCTTGG 360 Query 155747 CTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCA 155806 |||| |||||||| || | |||||| |||||| ||||| | || ||||| |||| Sbjct 359 CTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTGGGTATTAGTACTATGGCGTTCA 300 Query 155807 ACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGA-CGCTAGTGGTAAAGTCATCCCT 155865 || | |||||||| || || ||||| || ||||| || || | ||| || || Sbjct 299 ACTTGAACGGTTTTAATTTTAACCAATCCGTAGTTGATAGCCA-AGGTCGTGTTATTAAC 241 Query 155866 ACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAAC 155925 || ||||| || || | || || ||| ||||||||||||||||||||| || ||||| Sbjct 240 ACTTGGGCTGATATCATAAATCGTGCTAATCTTGGTATGGAAGTAATGCATGAACGTAAT 181 Query 155926 GCTCACAACTTCCCTCTTGACCTTGCTGCTG 155956 || |||||||||||||| || || ||| ||| Sbjct 180 GCACACAACTTCCCTCTAGATCTAGCTTCTG 150 >seq2 Length=81761211 Score = 239 bits (264), Expect = 5e-58 Identities = 307/421 (73%), Gaps = 2/421 (0%) Strand=Plus/Plus Query 155537 TCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTG 155596 |||| || || || ||| ||||||||| ||||| ||||| || ||| ||||| | | Sbjct 48005766 TCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTAATCAGGG 48005825 Query 155597 AAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTT 155656 |||| ||||| | |||||| || | ||||||| || || ||||| |||||||| | Sbjct 48005826 AAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCT 48005885 Query 155657 ATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCA 155716 |||| ||||| || |||||||| || || || || | |||||||| ||||| |||| Sbjct 48005886 ATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCA 48005945 Query 155717 ACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAA 155776 |||| || | | || |||||| | ||||| |||||||| || | |||||| | Sbjct 48005946 ACAATTCCCGTTCCTTGCATTTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGGTTCA 48006005 Query 155777 CTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTG 155836 ||||| ||||| | || ||||| |||||| | |||||||| || || ||||| || | Sbjct 48006006 CTGCTTTGGGTATTAGTACTATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAATCCG 48006065 Query 155837 TAGTAGAC-GCTAGTGGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGT 155895 |||| || || | ||| || || || ||||| || || | || || ||| | Sbjct 48006066 TAGTTGATAGCCAA-GGTCGTGTTATTAACACTTGGGCTGATATCATAAATCGTGCTAAT 48006124 Query 155896 CTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCT 155955 |||||||||||||||||||| || ||||| || |||||||||||||| || || ||| || Sbjct 48006125 CTTGGTATGGAAGTAATGCATGAACGTAATGCACACAACTTCCCTCTAGATCTAGCTTCT 48006184 Query 155956 G 155956 | Sbjct 48006185 G 48006185 Score = 96.9 bits (106), Expect = 4e-15 Identities = 177/258 (69%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| ||||| | || |||| || || |||||| | ||||||||| | | ||| Sbjct 9671233 CTGAAAACCGTACGTACATCGGATGATTTGGTGTTTTAATGATCCCTACTTTATTGACTG 9671174 Query 155051 CTG---CTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTA 155107 | || || |||||||| ||||||||||| |||| | || |||||||||| Sbjct 9671173 CAATATCTGTATTTATCATTGTC---TTCATTGCTGCCCCTCTAATCGATATTGATGGTA 9671117 Query 155108 TTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTG 155167 ||| ||||| | || | |||||| | |||| || || || ||||| |||| || Sbjct 9671116 TTCATGAACTTATTTCTAGGTCTTTATTTTATGAAAATAATATTATCTCAGGTGTCATTA 9671057 Query 155168 TCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTG 155227 | |||| ||| || || | | | | || || || || ||||||||| || || ||| Sbjct 9671056 TTCCTATTTCCGCAGCTATAGCTTTGTATTTTTACCCAATATGGGAAGCATCATCTGTTG 9670997 Query 155228 ATGAGTGGTTGTACAATG 155245 |||| || || ||||||| Sbjct 9670996 ATGAATGATTATACAATG 9670979 Score = 93.3 bits (102), Expect = 5e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 155206 ATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTA 155265 || ||||||||| || || ||||||||||||| |||||||| ||||||| || || | Sbjct 22128489 ATATGGGAAGCAACATCTATTGATGAGTGGTTATACAATGGCGGTCCTTATGAAATTATT 22128548 Query 155266 GTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTAC 155325 || | ||||| | || || | | ||| |||||| ||||||||||| || | Sbjct 22128549 GTTCTACACTTTTTAATTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTC 22128608 Query 155326 CGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGC 155381 | || || |||| |||||||| ||||||||| || || || || | ||||| Sbjct 22128609 CATCAGGGTATGCACCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCGGCTGC 22128664 >seq374 Length=1248919 Score = 235 bits (260), Expect = 6e-57 Identities = 305/419 (73%), Gaps = 2/419 (0%) Strand=Plus/Plus Query 155539 GGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAA 155598 || || || || ||| ||||||||| ||||| ||||| || ||| ||||| | ||| Sbjct 600774 GGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTAATCAGGGAA 600833 Query 155599 ACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTAT 155658 || ||||| | |||||| || | ||||||| || || ||||| |||||||| ||| Sbjct 600834 ACCACTGAAAATGAGTCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTAT 600893 Query 155659 AACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAAC 155718 || ||||| || |||||||| || || || || | |||||||| ||||| |||||| Sbjct 600894 AATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAAC 600953 Query 155719 AACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACT 155778 || || | | || |||||| | ||||| |||||||| || | |||||| ||| Sbjct 600954 AATTCCCGTTCCTTGCATTTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGGTTCACT 601013 Query 155779 GCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTA 155838 ||| ||||| | || ||||| |||||| | |||||||| || || ||||| || ||| Sbjct 601014 GCTTTGGGTATTAGTACTATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAATCCGTA 601073 Query 155839 GTAGAC-GCTAGTGGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCT 155897 || || || | ||| || || || ||||| || || | || || ||| ||| Sbjct 601074 GTTGATAGCCAA-GGTCGTGTTATTAACACTTGGGCTGATATCATAAATCGTGCTAATCT 601132 Query 155898 TGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTG 155956 |||||||||||||||||| || ||||| || |||||||||||||| || || ||| ||| Sbjct 601133 TGGTATGGAAGTAATGCATGAACGTAATGCACACAACTTCCCTCTAGATCTAGCTTCTG 601191 >seq64191 Length=168564 Score = 206 bits (228), Expect = 3e-48 Identities = 303/426 (71%), Gaps = 2/426 (0%) Strand=Plus/Plus Query 155071 GCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCT 155130 |||||||||||||| |||| | || |||||||||||||||||||| || |||| ||| Sbjct 58658 GCCTTCATTGCTGCCTCTCCAGCCGATATTGATGGTATTCGTGAACCTGTTTCTGGGTCT 58717 Query 155131 TTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGT 155190 || | ||||| ||||| || ||||| ||| || | |||| ||| || || ||| Sbjct 58718 CTACTTTATGGAAACAATATTATCTCAAGTGTCATTATTCCTACTTCCGCAGCTATAGGT 58777 Query 155191 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGT 155250 | || || || || || ||||||| || | || ||||||||||||| ||||| ||| Sbjct 58778 TTGCATTTTTACCCAATATGGGAAGTAGAATCTGTTGATGAGTGGTTATACAACAACGGT 58837 Query 155251 CCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAG 155310 |||| ||||| | || | |||| | | || | | ||| |||||| || Sbjct 58838 CCTTATGAACTTATTGTTCTATACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAG 58897 Query 155311 TGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCA 155370 ||||||||| || |||||| || ||| | |||||||| ||||||||| || || || Sbjct 58898 TGGGAACTTAGTTTCCGTCTGGGTATGTGCCCTTGGATTGCTGTTGCATATTCAGCTCCT 58957 Query 155371 GTATCTGCTGCGTTCGCTGTATTCCTTG-TTTATCCTTTCGGTCAAGGTTCTTTCTCTGA 155429 || | ||||| |||| || |||| | || ||| | || ||||| ||||||||| Sbjct 58958 GTTGCGGCTGCTACAACTGT-TTACTTGATCTACCCTATTGGCCAAGGAAGTTTCTCTGA 59016 Query 155430 TGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACA 155489 || |||||| | || || ||||||| ||| |||| ||| | || | ||| |||| || Sbjct 59017 TGGTATGCCTTTAGGAATATCTGGTAATTTCAACTTCATGATTGTATGCCAGTCAGAGCA 59076 Query 155490 CAATAT 155495 ||| || Sbjct 59077 CAACAT 59082 >seq767 Length=205183 Score = 98.7 bits (108), Expect = 1e-15 Identities = 122/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 155073 CTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGG--TTCT 155130 |||| ||||||| ||||| || || |||||||||||||||||| | || |||| ||| Sbjct 188078 CTTCCTTGCTGCCCCTCCAGTTGATATTGATGGTATTCGTGAATCTGTTTCTGGGTGTCT 188137 Query 155131 TTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGT 155190 ||| | ||||| |||||||| ||||| |||| || | | || ||| || || ||| Sbjct 188138 TTACTTTATGGAAACAACATTATCTCAGGTGTCATTATTCTTACTTCTGCAGCTATAGGT 188197 Query 155191 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGT 155236 | | || || || || || |||||| || || || |||||||| Sbjct 188198 TTGCTTTTTTACCCAATATGAGAAGCAACATCTGCTGTTGAGTGGT 188243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584180301543040