Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq202 109 1e-18 seq876 93.3 8e-14 seq921 86.0 1e-11 >seq202 Length=4793652 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| || || | ||| | || ||||| | |||| ||| || ||| ||||| || Sbjct 4328799 ATACCTCCCCTGAGTCGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCT 4328740 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | ||| || | || || || ||||||||||| ||||| || || ||| Sbjct 4328739 GCAAGTGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGA 4328680 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| || || || |||| || | ||| || || ||||| |||| Sbjct 4328679 GGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCA 4328620 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| ||||| || || ||||| ||||| || || ||||| || ||||| Sbjct 4328619 ACTTCAAGAGTGATCGTCTTACCAGTTAGGGTCTTCACAAAAATCTGCAT 4328570 >seq876 Length=1913211 Score = 93.3 bits (102), Expect = 8e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || || || | || | |||||| || || |||||||| | |||| Sbjct 530621 CGAAGAACAAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCG 530562 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||||||||||| ||||| || ||||| || || || || || || ||||| Sbjct 530561 TCCTCGAGCTGTTTTCCGGCGAAAATCAACCTCTGCTGGTCCGGTGGGATGCCCTCTTTG 530502 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || ||||| | || | || || || |||||| ||| || || ||||| || Sbjct 530501 TCCTGGATTTTTGACTTAACGATTTCGATGGTGTCGGAACTCTCCACGTCGAGAGTAATG 530442 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || || || ||||| ||||| || |||||| Sbjct 530441 GTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCATT 530406 >seq921 Length=516242 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || || |||| || || || || || | |||| ||| || || || ||||| Sbjct 186612 ATCCCTCCCCTCAGACGGAGAACAAGGTGGAGTGTAAACTCCTTCTGGATGTTGTAGTCT 186671 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | | ||| || | || || ||||| || || || || || ||||| ||| Sbjct 186672 GCAAGGGTACGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAACCTTTGCTGATCTGGA 186731 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||||||||| ||||||| || | || || || || || ||| Sbjct 186732 GGGATGCCCTCTTTATCTTGAATTTTGGCCTTCACTTTGTCGATGGTGTCTGAGCTTTCA 186791 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || ||||| ||||| || || || || ||||| || ||||| Sbjct 186792 ACCTCTAGGGTGATAGTCTTACCGGTGAGAGTCTTCACAAAGATCTGCAT 186841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898646967002880